RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 HFM1A2PYH4 1435 aa28.64■■■□□ 2.18
CLPTM1-209ENST00000588855 DEPDC5O75140 1603 aa28.64■■■□□ 2.18
CLPTM1-209ENST00000588855 GGT6Q6P531 493 aa28.64■■■□□ 2.17
CLPTM1-209ENST00000588855 RIMS1Q86UR5 1692 aaKnown RBP28.63■■■□□ 2.17
CLPTM1-209ENST00000588855 PRDM15P57071 1507 aaPredicted RBP28.6■■■□□ 2.17
CLPTM1-209ENST00000588855 CLTCQ00610 1675 aaKnown RBP28.58■■■□□ 2.17
CLPTM1-209ENST00000588855 UNC13BO14795 1591 aa28.56■■■□□ 2.16
CLPTM1-209ENST00000588855 CEP152O94986 1710 aa28.54■■■□□ 2.16
CLPTM1-209ENST00000588855 KDM5DQ9BY66 1539 aa28.54■■■□□ 2.16
CLPTM1-209ENST00000588855 FAM135AQ9P2D6 1515 aa28.53■■■□□ 2.16
CLPTM1-209ENST00000588855 ZC3H13Q5T200 1668 aaKnown RBP28.53■■■□□ 2.16
CLPTM1-209ENST00000588855 MROH2AA6NES4 1674 aa28.52■■■□□ 2.16
CLPTM1-209ENST00000588855 TRIM26Q12899 539 aaPredicted RBP28.51■■■□□ 2.15
CLPTM1-209ENST00000588855 ABCC3O15438 1527 aa28.51■■■□□ 2.15
CLPTM1-209ENST00000588855 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.5■■■□□ 2.152e-7■■□□□ 11.9
CLPTM1-209ENST00000588855 ESF1Q9H501 851 aaKnown RBP28.5■■■□□ 2.15
CLPTM1-209ENST00000588855 PPP6R1Q9UPN7 881 aa28.5■■■□□ 2.15
CLPTM1-209ENST00000588855 CNTLNQ9NXG0 1405 aa28.5■■■□□ 2.15
CLPTM1-209ENST00000588855 VWDEQ8N2E2 1590 aa28.5■■■□□ 2.15
CLPTM1-209ENST00000588855 PTPRMP28827 1452 aa28.5■■■□□ 2.15
CLPTM1-209ENST00000588855 C3P01024 1663 aa28.48■■■□□ 2.15
CLPTM1-209ENST00000588855 WASHC2CQ9Y4E1 1318 aa28.46■■■□□ 2.15
CLPTM1-209ENST00000588855 SETD5Q9C0A6 1442 aa28.46■■■□□ 2.15
CLPTM1-209ENST00000588855 KANK1Q14678 1352 aa28.45■■■□□ 2.15
CLPTM1-209ENST00000588855 CAMSAP1Q5T5Y3 1602 aa28.45■■■□□ 2.14
CLPTM1-209ENST00000588855 IQGAP3Q86VI3 1631 aa28.44■■■□□ 2.14
CLPTM1-209ENST00000588855 LMTK2Q8IWU2 1503 aa28.41■■■□□ 2.14
CLPTM1-209ENST00000588855 ZMYM3Q14202 1370 aa28.4■■■□□ 2.14
CLPTM1-209ENST00000588855 RAB3GAP2Q9H2M9 1393 aa28.4■■■□□ 2.14
CLPTM1-209ENST00000588855 PLPPR3Q6T4P5 718 aa28.39■■■□□ 2.14
CLPTM1-209ENST00000588855 NUP155O75694 1391 aa28.39■■■□□ 2.14
CLPTM1-209ENST00000588855 CEBPAP49715 358 aaPredicted RBP28.38■■■□□ 2.13
CLPTM1-209ENST00000588855 TET3O43151 1660 aa28.38■■■□□ 2.13
CLPTM1-209ENST00000588855 EFCAB6Q5THR3 1501 aa28.36■■■□□ 2.13
CLPTM1-209ENST00000588855 PZPP20742 1482 aa28.34■■■□□ 2.13
CLPTM1-209ENST00000588855 TRIM52Q96A61 297 aa28.32■■■□□ 2.12
CLPTM1-209ENST00000588855 CFAP65Q6ZU64 1925 aaKnown RBP28.31■■■□□ 2.12
CLPTM1-209ENST00000588855 ARHGAP31Q2M1Z3 1444 aa28.31■■■□□ 2.12
CLPTM1-209ENST00000588855 NPATQ14207 1427 aa28.3■■■□□ 2.12
CLPTM1-209ENST00000588855 E9PCH4 1651 aa28.29■■■□□ 2.12
CLPTM1-209ENST00000588855 PREX1Q8TCU6 1659 aa28.28■■■□□ 2.12
CLPTM1-209ENST00000588855 FBXO31Q5XUX0 539 aaPredicted RBP28.25■■■□□ 2.11
CLPTM1-209ENST00000588855 SPATA31D1Q6ZQQ2 1576 aa28.24■■■□□ 2.11
CLPTM1-209ENST00000588855 ERVK-7P63135 1459 aa28.24■■■□□ 2.11
CLPTM1-209ENST00000588855 RPRD2Q5VT52 1461 aaKnown RBP28.23■■■□□ 2.11
CLPTM1-209ENST00000588855 AEBP2Q6ZN18 517 aaPredicted RBP28.23■■■□□ 2.11
CLPTM1-209ENST00000588855 SETD1BQ9UPS6 1966 aaKnown RBP28.21■■■□□ 2.11
CLPTM1-209ENST00000588855 HRCP23327 699 aa28.21■■■□□ 2.11
CLPTM1-209ENST00000588855 ACIN1Q9UKV3 1341 aaKnown RBP28.21■■■□□ 2.11
CLPTM1-209ENST00000588855 MYO3AQ8NEV4 1616 aa28.2■■■□□ 2.11
CLPTM1-209ENST00000588855 PCGF6Q9BYE7 350 aa28.2■■■□□ 2.1
CLPTM1-209ENST00000588855 SLC4A1APQ9BWU0 796 aaKnown RBP28.18■■■□□ 2.1
CLPTM1-209ENST00000588855 TNRQ92752 1358 aa28.17■■■□□ 2.1
CLPTM1-209ENST00000588855 SYNMO15061 1565 aa28.16■■■□□ 2.1
CLPTM1-209ENST00000588855 NOS1P29475 1434 aa28.16■■■□□ 2.1
CLPTM1-209ENST00000588855 SPHKAPQ2M3C7 1700 aa28.15■■■□□ 2.1
CLPTM1-209ENST00000588855 PKD2Q13563 968 aa28.14■■■□□ 2.1
CLPTM1-209ENST00000588855 MPHOSPH9Q99550 1183 aa28.14■■■□□ 2.1
CLPTM1-209ENST00000588855 ZNF142P52746 1687 aaPredicted RBP28.12■■■□□ 2.09
CLPTM1-209ENST00000588855 UHRF1BP1Q6BDS2 1440 aa28.11■■■□□ 2.09
CLPTM1-209ENST00000588855 LMTK3Q96Q04 1460 aa28.09■■■□□ 2.09
CLPTM1-209ENST00000588855 CEP170BQ9Y4F5 1589 aaPredicted RBP28.09■■■□□ 2.09
CLPTM1-209ENST00000588855 FOXD1Q16676 465 aa28.08■■■□□ 2.08
CLPTM1-209ENST00000588855 NLRP1Q9C000 1473 aa28.07■■■□□ 2.08
CLPTM1-209ENST00000588855 UGGT1Q9NYU2 1555 aa28.07■■■□□ 2.08
CLPTM1-209ENST00000588855 PTPRTO14522 1441 aa28.07■■■□□ 2.08
CLPTM1-209ENST00000588855 PIK3C2BO00750 1634 aa28.06■■■□□ 2.08
CLPTM1-209ENST00000588855 TRPM2O94759 1503 aa28.05■■■□□ 2.08
CLPTM1-209ENST00000588855 A2ML1A8K2U0 1454 aa28.04■■■□□ 2.08
CLPTM1-209ENST00000588855 PLA2R1Q13018 1463 aa28.03■■■□□ 2.08
CLPTM1-209ENST00000588855 CLTCL1P53675 1640 aa28■■■□□ 2.07
CLPTM1-209ENST00000588855 UBR1Q8IWV7 1749 aa28■■■□□ 2.07
CLPTM1-209ENST00000588855 IDI1Q13907 227 aa27.98■■■□□ 2.07
CLPTM1-209ENST00000588855 SLC52A1Q9NWF4 448 aa27.97■■■□□ 2.07
CLPTM1-209ENST00000588855 MYO5BQ9ULV0 1848 aa27.96■■■□□ 2.07
CLPTM1-209ENST00000588855 ADGRB3O60242 1522 aa27.96■■■□□ 2.07
CLPTM1-209ENST00000588855 KDM5AP29375 1690 aaKnown RBP27.95■■■□□ 2.07
CLPTM1-209ENST00000588855 HSPA2P54652 639 aa27.94■■■□□ 2.06
CLPTM1-209ENST00000588855 TMEM131LA2VDJ0 1609 aa27.93■■■□□ 2.06
CLPTM1-209ENST00000588855 DHX57Q6P158 1386 aaKnown RBP27.92■■■□□ 2.06
CLPTM1-209ENST00000588855 KIF1BO60333 1816 aa27.91■■■□□ 2.06
CLPTM1-209ENST00000588855 ANKRD30BQ9BXX2 1392 aa27.89■■■□□ 2.06
CLPTM1-209ENST00000588855 CCDC144AA2RUR9 1427 aa27.89■■■□□ 2.05
CLPTM1-209ENST00000588855 STAG3Q9UJ98 1225 aa27.87■■■□□ 2.05
CLPTM1-209ENST00000588855 CHGAP10645 457 aaKnown RBP27.85■■■□□ 2.05
CLPTM1-209ENST00000588855 THEMISQ8N1K5 641 aaPredicted RBP27.84■■■□□ 2.05
CLPTM1-209ENST00000588855 STRCQ7RTU9 1775 aa27.82■■■□□ 2.04
CLPTM1-209ENST00000588855 POLR1AO95602 1720 aaPredicted RBP27.81■■■□□ 2.04
CLPTM1-209ENST00000588855 SLIT1O75093 1534 aa27.81■■■□□ 2.04
CLPTM1-209ENST00000588855 ARHGAP23Q9P227 1491 aa27.81■■■□□ 2.04
CLPTM1-209ENST00000588855 TMEM2Q9UHN6 1383 aa27.79■■■□□ 2.04
CLPTM1-209ENST00000588855 SPATA31E1Q6ZUB1 1445 aa27.75■■■□□ 2.03
CLPTM1-209ENST00000588855 ZFYVE9O95405 1425 aa27.75■■■□□ 2.03
CLPTM1-209ENST00000588855 NEURL4Q96JN8 1562 aa27.74■■■□□ 2.03
CLPTM1-209ENST00000588855 RIMS2Q9UQ26 1411 aa27.73■■■□□ 2.03
CLPTM1-209ENST00000588855 NCKAP5LQ9HCH0 1330 aa27.72■■■□□ 2.03
CLPTM1-209ENST00000588855 SCAF11Q99590 1463 aaKnown RBP27.72■■■□□ 2.03
CLPTM1-209ENST00000588855 ZNF326Q5BKZ1 582 aaKnown RBP27.72■■■□□ 2.03
CLPTM1-209ENST00000588855 NEXMIFQ5QGS0 1516 aa27.72■■■□□ 2.03
CLPTM1-209ENST00000588855 LTKP29376 864 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms