RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 ERBINQ96RT1 1412 aa30.88■■■□□ 2.53
DDX39A-207ENST00000588542 CNTLNQ9NXG0 1405 aa30.86■■■□□ 2.53
DDX39A-207ENST00000588542 MROH1Q8NDA8 1641 aa30.86■■■□□ 2.53
DDX39A-207ENST00000588542 ITGAEP38570 1179 aa30.85■■■□□ 2.53
DDX39A-207ENST00000588542 PPP6R1Q9UPN7 881 aa30.84■■■□□ 2.53
DDX39A-207ENST00000588542 ROCK1Q13464 1354 aa30.83■■■□□ 2.53
DDX39A-207ENST00000588542 ESF1Q9H501 851 aaKnown RBP30.83■■■□□ 2.53
DDX39A-207ENST00000588542 DEPDC5O75140 1603 aa30.81■■■□□ 2.52
DDX39A-207ENST00000588542 CEBPAP49715 358 aaPredicted RBP30.81■■■□□ 2.52
DDX39A-207ENST00000588542 FAM135AQ9P2D6 1515 aa30.81■■■□□ 2.52
DDX39A-207ENST00000588542 KDM5DQ9BY66 1539 aa30.79■■■□□ 2.52
DDX39A-207ENST00000588542 PLPPR3Q6T4P5 718 aa30.79■■■□□ 2.52
DDX39A-207ENST00000588542 PRDM15P57071 1507 aaPredicted RBP30.76■■■□□ 2.51
DDX39A-207ENST00000588542 ZMYM3Q14202 1370 aa30.76■■■□□ 2.51
DDX39A-207ENST00000588542 ZC3H13Q5T200 1668 aaKnown RBP30.75■■■□□ 2.51
DDX39A-207ENST00000588542 CEP152O94986 1710 aa30.75■■■□□ 2.51
DDX39A-207ENST00000588542 ANKRD50Q9ULJ7 1429 aa30.74■■■□□ 2.51
DDX39A-207ENST00000588542 ABCC3O15438 1527 aa30.73■■■□□ 2.51
DDX39A-207ENST00000588542 SETD1BQ9UPS6 1966 aaKnown RBP30.72■■■□□ 2.51
DDX39A-207ENST00000588542 WASHC2CQ9Y4E1 1318 aa30.71■■■□□ 2.51
DDX39A-207ENST00000588542 PREX1Q8TCU6 1659 aa30.68■■■□□ 2.5
DDX39A-207ENST00000588542 VWDEQ8N2E2 1590 aa30.67■■■□□ 2.5
DDX39A-207ENST00000588542 GCC2Q8IWJ2 1684 aa30.66■■■□□ 2.5
DDX39A-207ENST00000588542 CAMSAP1Q5T5Y3 1602 aa30.65■■■□□ 2.5
DDX39A-207ENST00000588542 UNC13BO14795 1591 aa30.64■■■□□ 2.5
DDX39A-207ENST00000588542 NPATQ14207 1427 aa30.64■■■□□ 2.49
DDX39A-207ENST00000588542 LMTK3Q96Q04 1460 aa30.63■■■□□ 2.49
DDX39A-207ENST00000588542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.63■■■□□ 2.498e-8■■■□□ 17.9
DDX39A-207ENST00000588542 PZPP20742 1482 aa30.62■■■□□ 2.49
DDX39A-207ENST00000588542 NAIPQ13075 1403 aa30.61■■■□□ 2.49
DDX39A-207ENST00000588542 LMTK2Q8IWU2 1503 aa30.59■■■□□ 2.49
DDX39A-207ENST00000588542 CFAP65Q6ZU64 1925 aaKnown RBP30.59■■■□□ 2.49
DDX39A-207ENST00000588542 KANK1Q14678 1352 aa30.58■■■□□ 2.49
DDX39A-207ENST00000588542 HFM1A2PYH4 1435 aa30.56■■■□□ 2.48
DDX39A-207ENST00000588542 FBXO31Q5XUX0 539 aaPredicted RBP30.55■■■□□ 2.48
DDX39A-207ENST00000588542 MYO3AQ8NEV4 1616 aa30.54■■■□□ 2.48
DDX39A-207ENST00000588542 UHRF1BP1Q6BDS2 1440 aa30.53■■■□□ 2.48
DDX39A-207ENST00000588542 ARHGAP31Q2M1Z3 1444 aa30.52■■■□□ 2.48
DDX39A-207ENST00000588542 IQGAP3Q86VI3 1631 aa30.51■■■□□ 2.48
DDX39A-207ENST00000588542 SPATA31D1Q6ZQQ2 1576 aa30.5■■■□□ 2.47
DDX39A-207ENST00000588542 EFCAB6Q5THR3 1501 aa30.5■■■□□ 2.47
DDX39A-207ENST00000588542 TET3O43151 1660 aa30.49■■■□□ 2.47
DDX39A-207ENST00000588542 ZNF142P52746 1687 aaPredicted RBP30.49■■■□□ 2.47
DDX39A-207ENST00000588542 ERVK-7P63135 1459 aa30.48■■■□□ 2.47
DDX39A-207ENST00000588542 TNRQ92752 1358 aa30.46■■■□□ 2.47
DDX39A-207ENST00000588542 HSPA2P54652 639 aa30.44■■■□□ 2.46
DDX39A-207ENST00000588542 CEP170BQ9Y4F5 1589 aaPredicted RBP30.43■■■□□ 2.46
DDX39A-207ENST00000588542 NUP155O75694 1391 aa30.42■■■□□ 2.46
DDX39A-207ENST00000588542 E9PCH4 1651 aa30.41■■■□□ 2.46
DDX39A-207ENST00000588542 A2ML1A8K2U0 1454 aa30.38■■■□□ 2.45
DDX39A-207ENST00000588542 RPRD2Q5VT52 1461 aaKnown RBP30.37■■■□□ 2.45
DDX39A-207ENST00000588542 NLRP1Q9C000 1473 aa30.36■■■□□ 2.45
DDX39A-207ENST00000588542 SYNMO15061 1565 aa30.35■■■□□ 2.45
DDX39A-207ENST00000588542 STRCQ7RTU9 1775 aa30.34■■■□□ 2.45
DDX39A-207ENST00000588542 NOS1P29475 1434 aa30.34■■■□□ 2.45
DDX39A-207ENST00000588542 SETD5Q9C0A6 1442 aa30.31■■■□□ 2.44
DDX39A-207ENST00000588542 UBR1Q8IWV7 1749 aa30.27■■■□□ 2.44
DDX39A-207ENST00000588542 UGGT1Q9NYU2 1555 aa30.27■■■□□ 2.44
DDX39A-207ENST00000588542 PIK3C2BO00750 1634 aa30.26■■■□□ 2.44
DDX39A-207ENST00000588542 TRIM52Q96A61 297 aa30.26■■■□□ 2.43
DDX39A-207ENST00000588542 SPHKAPQ2M3C7 1700 aa30.22■■■□□ 2.43
DDX39A-207ENST00000588542 PLA2R1Q13018 1463 aa30.22■■■□□ 2.43
DDX39A-207ENST00000588542 RAB3GAP2Q9H2M9 1393 aa30.21■■■□□ 2.43
DDX39A-207ENST00000588542 KDM5AP29375 1690 aaKnown RBP30.2■■■□□ 2.43
DDX39A-207ENST00000588542 IDI1Q13907 227 aa30.19■■■□□ 2.42
DDX39A-207ENST00000588542 POLR1AO95602 1720 aaPredicted RBP30.17■■■□□ 2.42
DDX39A-207ENST00000588542 THEMISQ8N1K5 641 aaPredicted RBP30.16■■■□□ 2.42
DDX39A-207ENST00000588542 MYO5BQ9ULV0 1848 aa30.16■■■□□ 2.42
DDX39A-207ENST00000588542 PTPRTO14522 1441 aa30.15■■■□□ 2.42
DDX39A-207ENST00000588542 SLC4A1APQ9BWU0 796 aaKnown RBP30.15■■■□□ 2.42
DDX39A-207ENST00000588542 SLC52A1Q9NWF4 448 aa30.15■■■□□ 2.42
DDX39A-207ENST00000588542 ADGRB3O60242 1522 aa30.13■■■□□ 2.41
DDX39A-207ENST00000588542 PKD2Q13563 968 aa30.13■■■□□ 2.41
DDX39A-207ENST00000588542 NCKAP5LQ9HCH0 1330 aa30.12■■■□□ 2.41
DDX39A-207ENST00000588542 ACIN1Q9UKV3 1341 aaKnown RBP30.12■■■□□ 2.41
DDX39A-207ENST00000588542 NEURL4Q96JN8 1562 aa30.1■■■□□ 2.41
DDX39A-207ENST00000588542 TMEM131LA2VDJ0 1609 aa30.1■■■□□ 2.41
DDX39A-207ENST00000588542 TRPM2O94759 1503 aa30.09■■■□□ 2.41
DDX39A-207ENST00000588542 SLIT1O75093 1534 aa30.08■■■□□ 2.41
DDX39A-207ENST00000588542 ARHGAP23Q9P227 1491 aa30.08■■■□□ 2.41
DDX39A-207ENST00000588542 MPHOSPH9Q99550 1183 aa30.08■■■□□ 2.41
DDX39A-207ENST00000588542 HRCP23327 699 aa30.07■■■□□ 2.4
DDX39A-207ENST00000588542 CLTCL1P53675 1640 aa30.07■■■□□ 2.4
DDX39A-207ENST00000588542 DMRT2Q9Y5R5 561 aa30.05■■■□□ 2.4
DDX39A-207ENST00000588542 STAG3Q9UJ98 1225 aa30.04■■■□□ 2.4
DDX39A-207ENST00000588542 ANKLE2Q86XL3 938 aa30.03■■■□□ 2.4
DDX39A-207ENST00000588542 FOXD1Q16676 465 aa30.02■■■□□ 2.4
DDX39A-207ENST00000588542 TMEM2Q9UHN6 1383 aa30.02■■■□□ 2.4
DDX39A-207ENST00000588542 MED14O60244 1454 aa30■■■□□ 2.39
DDX39A-207ENST00000588542 TRIM26Q12899 539 aaPredicted RBP30■■■□□ 2.39
DDX39A-207ENST00000588542 KIF1BO60333 1816 aa29.99■■■□□ 2.39
DDX39A-207ENST00000588542 SCAF11Q99590 1463 aaKnown RBP29.98■■■□□ 2.39
DDX39A-207ENST00000588542 LTKP29376 864 aa29.97■■■□□ 2.39
DDX39A-207ENST00000588542 IQGAP1P46940 1657 aa29.97■■■□□ 2.39
DDX39A-207ENST00000588542 CHGAP10645 457 aaKnown RBP29.94■■■□□ 2.38
DDX39A-207ENST00000588542 NPHP4O75161 1426 aaPredicted RBP29.94■■■□□ 2.38
DDX39A-207ENST00000588542 ZFYVE9O95405 1425 aa29.94■■■□□ 2.38
DDX39A-207ENST00000588542 TXNDC2Q86VQ3 553 aa29.93■■■□□ 2.38
DDX39A-207ENST00000588542 EID1Q9Y6B2 187 aa29.9■■■□□ 2.38
DDX39A-207ENST00000588542 RIMS2Q9UQ26 1411 aa29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms