RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 KIF3BO15066 747 aa16.29■□□□□ 0.2
TPM4-209ENST00000588483 ADGRL2O95490 1459 aa16.29■□□□□ 0.2
TPM4-209ENST00000588483 PTPRKQ15262 1439 aa16.28■□□□□ 0.2
TPM4-209ENST00000588483 ERBINQ96RT1 1412 aa16.28■□□□□ 0.2
TPM4-209ENST00000588483 ZC3H13Q5T200 1668 aaKnown RBP16.28■□□□□ 0.2
TPM4-209ENST00000588483 MROH1Q8NDA8 1641 aa16.28■□□□□ 0.2
TPM4-209ENST00000588483 PLPPR3Q6T4P5 718 aa16.28■□□□□ 0.2
TPM4-209ENST00000588483 KIF15Q9NS87 1388 aa16.27■□□□□ 0.2
TPM4-209ENST00000588483 PZPP20742 1482 aa16.26■□□□□ 0.19
TPM4-209ENST00000588483 NCOA1Q15788 1441 aa16.26■□□□□ 0.19
TPM4-209ENST00000588483 PRDM15P57071 1507 aaPredicted RBP16.25■□□□□ 0.19
TPM4-209ENST00000588483 ZNF142P52746 1687 aaPredicted RBP16.25■□□□□ 0.19
TPM4-209ENST00000588483 ANKRD30AQ9BXX3 1397 aa16.25■□□□□ 0.19
TPM4-209ENST00000588483 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.25■□□□□ 0.19
TPM4-209ENST00000588483 DEPDC5O75140 1603 aa16.24■□□□□ 0.19
TPM4-209ENST00000588483 HSPA2P54652 639 aa16.24■□□□□ 0.19
TPM4-209ENST00000588483 ABCC3O15438 1527 aa16.24■□□□□ 0.19
TPM4-209ENST00000588483 MYO3AQ8NEV4 1616 aa16.23■□□□□ 0.19
TPM4-209ENST00000588483 WASHC2CQ9Y4E1 1318 aa16.21■□□□□ 0.19
TPM4-209ENST00000588483 STRCQ7RTU9 1775 aa16.21■□□□□ 0.19
TPM4-209ENST00000588483 CEP170BQ9Y4F5 1589 aaPredicted RBP16.2■□□□□ 0.18
TPM4-209ENST00000588483 FAM50AQ14320 339 aaKnown RBP16.19■□□□□ 0.18
TPM4-209ENST00000588483 RRP7BPQ9NSQ0 103 aa16.19■□□□□ 0.18
TPM4-209ENST00000588483 VWDEQ8N2E2 1590 aa16.18■□□□□ 0.18
TPM4-209ENST00000588483 ARHGAP31Q2M1Z3 1444 aa16.18■□□□□ 0.18
TPM4-209ENST00000588483 SPATA31D1Q6ZQQ2 1576 aa16.17■□□□□ 0.18
TPM4-209ENST00000588483 PLA2R1Q13018 1463 aa16.17■□□□□ 0.18
TPM4-209ENST00000588483 CEP152O94986 1710 aa16.17■□□□□ 0.18
TPM4-209ENST00000588483 ROCK1Q13464 1354 aa16.17■□□□□ 0.18
TPM4-209ENST00000588483 CAMSAP1Q5T5Y3 1602 aa16.17■□□□□ 0.18
TPM4-209ENST00000588483 LMTK2Q8IWU2 1503 aa16.17■□□□□ 0.18
TPM4-209ENST00000588483 RRBP1Q9P2E9 1410 aaKnown RBP16.17■□□□□ 0.18
TPM4-209ENST00000588483 A2ML1A8K2U0 1454 aa16.16■□□□□ 0.18
TPM4-209ENST00000588483 CHIC2Q9UKJ5 165 aa16.16■□□□□ 0.18
TPM4-209ENST00000588483 TNRQ92752 1358 aa16.15■□□□□ 0.18
TPM4-209ENST00000588483 NLRP1Q9C000 1473 aa16.15■□□□□ 0.18
TPM4-209ENST00000588483 PTPRTO14522 1441 aa16.14■□□□□ 0.17
TPM4-209ENST00000588483 ANKRD50Q9ULJ7 1429 aa16.14■□□□□ 0.17
TPM4-209ENST00000588483 FBXO31Q5XUX0 539 aaPredicted RBP16.13■□□□□ 0.17
TPM4-209ENST00000588483 DMRT2Q9Y5R5 561 aa16.13■□□□□ 0.17
TPM4-209ENST00000588483 ERVK-7P63135 1459 aa16.13■□□□□ 0.17
TPM4-209ENST00000588483 KANK1Q14678 1352 aa16.11■□□□□ 0.17
TPM4-209ENST00000588483 UNC13BO14795 1591 aa16.09■□□□□ 0.17
TPM4-209ENST00000588483 PPARGC1BQ86YN6 1023 aaKnown RBP16.09■□□□□ 0.17
TPM4-209ENST00000588483 EFCAB6Q5THR3 1501 aa16.09■□□□□ 0.17
TPM4-209ENST00000588483 PKD2Q13563 968 aa16.07■□□□□ 0.16
TPM4-209ENST00000588483 UGGT1Q9NYU2 1555 aa16.07■□□□□ 0.16
TPM4-209ENST00000588483 RPRD2Q5VT52 1461 aaKnown RBP16.05■□□□□ 0.16
TPM4-209ENST00000588483 POLR1AO95602 1720 aaPredicted RBP16.05■□□□□ 0.16
TPM4-209ENST00000588483 TET3O43151 1660 aa16.05■□□□□ 0.16
TPM4-209ENST00000588483 CFAP65Q6ZU64 1925 aaKnown RBP16.04■□□□□ 0.16
TPM4-209ENST00000588483 NOS1P29475 1434 aa16.03■□□□□ 0.16
TPM4-209ENST00000588483 KDM5AP29375 1690 aaKnown RBP16.03■□□□□ 0.16
TPM4-209ENST00000588483 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.03■□□□□ 0.162e-6■■□□□ 11.6
TPM4-209ENST00000588483 NEURL4Q96JN8 1562 aa16.03■□□□□ 0.16
TPM4-209ENST00000588483 UBR1Q8IWV7 1749 aa16.02■□□□□ 0.16
TPM4-209ENST00000588483 GCC2Q8IWJ2 1684 aa16.02■□□□□ 0.16
TPM4-209ENST00000588483 IQGAP3Q86VI3 1631 aa16.02■□□□□ 0.16
TPM4-209ENST00000588483 THEMISQ8N1K5 641 aaPredicted RBP16.02■□□□□ 0.16
TPM4-209ENST00000588483 MED14O60244 1454 aa16.01■□□□□ 0.15
TPM4-209ENST00000588483 SYNMO15061 1565 aa16■□□□□ 0.15
TPM4-209ENST00000588483 NCKAP5LQ9HCH0 1330 aa16■□□□□ 0.15
TPM4-209ENST00000588483 LTBP4Q8N2S1 1624 aa16■□□□□ 0.15
TPM4-209ENST00000588483 SLIT1O75093 1534 aa15.99■□□□□ 0.15
TPM4-209ENST00000588483 ARHGAP23Q9P227 1491 aa15.98■□□□□ 0.15
TPM4-209ENST00000588483 NAIPQ13075 1403 aa15.98■□□□□ 0.15
TPM4-209ENST00000588483 PIK3C2BO00750 1634 aa15.97■□□□□ 0.15
TPM4-209ENST00000588483 HFM1A2PYH4 1435 aa15.97■□□□□ 0.15
TPM4-209ENST00000588483 ITGAEP38570 1179 aa15.97■□□□□ 0.15
TPM4-209ENST00000588483 ILDR1Q86SU0 546 aaPredicted RBP15.97■□□□□ 0.15
TPM4-209ENST00000588483 E9PCH4 1651 aa15.96■□□□□ 0.15
TPM4-209ENST00000588483 ANKLE2Q86XL3 938 aa15.96■□□□□ 0.15
TPM4-209ENST00000588483 CERKQ8TCT0 537 aa15.96■□□□□ 0.15
TPM4-209ENST00000588483 FBXO41Q8TF61 875 aa15.96■□□□□ 0.15
TPM4-209ENST00000588483 IQSEC2Q5JU85 1478 aa15.96■□□□□ 0.14
TPM4-209ENST00000588483 SLC52A1Q9NWF4 448 aa15.94■□□□□ 0.14
TPM4-209ENST00000588483 ADGRB3O60242 1522 aa15.94■□□□□ 0.14
TPM4-209ENST00000588483 IQGAP1P46940 1657 aa15.93■□□□□ 0.14
TPM4-209ENST00000588483 NUP155O75694 1391 aa15.93■□□□□ 0.14
TPM4-209ENST00000588483 NPHP4O75161 1426 aaPredicted RBP15.93■□□□□ 0.14
TPM4-209ENST00000588483 SCAF11Q99590 1463 aaKnown RBP15.92■□□□□ 0.14
TPM4-209ENST00000588483 IDI1Q13907 227 aa15.92■□□□□ 0.14
TPM4-209ENST00000588483 TMEM2Q9UHN6 1383 aa15.91■□□□□ 0.14
TPM4-209ENST00000588483 ZNF335Q9H4Z2 1342 aaPredicted RBP15.89■□□□□ 0.13
TPM4-209ENST00000588483 TMEM131LA2VDJ0 1609 aa15.87■□□□□ 0.13
TPM4-209ENST00000588483 LTKP29376 864 aa15.87■□□□□ 0.13
TPM4-209ENST00000588483 CPS1P31327 1500 aa15.87■□□□□ 0.13
TPM4-209ENST00000588483 SPHKAPQ2M3C7 1700 aa15.85■□□□□ 0.13
TPM4-209ENST00000588483 ZFYVE9O95405 1425 aa15.85■□□□□ 0.13
TPM4-209ENST00000588483 MYO5BQ9ULV0 1848 aa15.84■□□□□ 0.13
TPM4-209ENST00000588483 TXNDC2Q86VQ3 553 aa15.84■□□□□ 0.13
TPM4-209ENST00000588483 STAG3Q9UJ98 1225 aa15.84■□□□□ 0.13
TPM4-209ENST00000588483 EID1Q9Y6B2 187 aa15.84■□□□□ 0.13
TPM4-209ENST00000588483 TRPM2O94759 1503 aa15.82■□□□□ 0.12
TPM4-209ENST00000588483 STRCP1A6NGW2 1772 aa15.81■□□□□ 0.12
TPM4-209ENST00000588483 RIMS2Q9UQ26 1411 aa15.78■□□□□ 0.12
TPM4-209ENST00000588483 ACIN1Q9UKV3 1341 aaKnown RBP15.78■□□□□ 0.12
TPM4-209ENST00000588483 PLEKHG1Q9ULL1 1385 aa15.77■□□□□ 0.12
TPM4-209ENST00000588483 CLTCL1P53675 1640 aa15.76■□□□□ 0.11
TPM4-209ENST00000588483 HDGFP51858 240 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms