RNA–Protein interactions for RNA: ENST00000588352.5

GHDC-208, Transcript of GH3 domain containing, humanhuman

TSL 5

Gene GHDC, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-208ENST00000588352 KDM5DQ9BY66 1539 aa26.09■■□□□ 1.77
GHDC-208ENST00000588352 ESF1Q9H501 851 aaKnown RBP26.09■■□□□ 1.77
GHDC-208ENST00000588352 RRP7BPQ9NSQ0 103 aa26.09■■□□□ 1.77
GHDC-208ENST00000588352 GGT6Q6P531 493 aa26.08■■□□□ 1.77
GHDC-208ENST00000588352 CHIC2Q9UKJ5 165 aa26.08■■□□□ 1.77
GHDC-208ENST00000588352 MROH1Q8NDA8 1641 aa26.06■■□□□ 1.76
GHDC-208ENST00000588352 PRDM15P57071 1507 aaPredicted RBP26.06■■□□□ 1.76
GHDC-208ENST00000588352 DEPDC5O75140 1603 aa26.03■■□□□ 1.76
GHDC-208ENST00000588352 ANKRD50Q9ULJ7 1429 aa26.02■■□□□ 1.76
GHDC-208ENST00000588352 CLTCQ00610 1675 aaKnown RBP26.02■■□□□ 1.76
GHDC-208ENST00000588352 C3P01024 1663 aa26.01■■□□□ 1.75
GHDC-208ENST00000588352 ZC3H13Q5T200 1668 aaKnown RBP26.01■■□□□ 1.75
GHDC-208ENST00000588352 ABCC3O15438 1527 aa26■■□□□ 1.75
GHDC-208ENST00000588352 NPATQ14207 1427 aa26■■□□□ 1.75
GHDC-208ENST00000588352 ZMYM3Q14202 1370 aa26■■□□□ 1.75
GHDC-208ENST00000588352 CEBPAP49715 358 aaPredicted RBP25.96■■□□□ 1.75
GHDC-208ENST00000588352 WASHC2CQ9Y4E1 1318 aa25.95■■□□□ 1.75
GHDC-208ENST00000588352 ITGAEP38570 1179 aa25.95■■□□□ 1.74
GHDC-208ENST00000588352 PZPP20742 1482 aa25.95■■□□□ 1.74
GHDC-208ENST00000588352 LMTK3Q96Q04 1460 aa25.95■■□□□ 1.74
GHDC-208ENST00000588352 VWDEQ8N2E2 1590 aa25.94■■□□□ 1.74
GHDC-208ENST00000588352 PLPPR3Q6T4P5 718 aa25.92■■□□□ 1.74
GHDC-208ENST00000588352 LMTK2Q8IWU2 1503 aa25.92■■□□□ 1.74
GHDC-208ENST00000588352 KANK1Q14678 1352 aa25.91■■□□□ 1.74
GHDC-208ENST00000588352 UNC13BO14795 1591 aa25.9■■□□□ 1.74
GHDC-208ENST00000588352 PREX1Q8TCU6 1659 aa25.9■■□□□ 1.74
GHDC-208ENST00000588352 UHRF1BP1Q6BDS2 1440 aa25.89■■□□□ 1.74
GHDC-208ENST00000588352 HFM1A2PYH4 1435 aa25.88■■□□□ 1.73
GHDC-208ENST00000588352 CAMSAP1Q5T5Y3 1602 aa25.87■■□□□ 1.73
GHDC-208ENST00000588352 NAIPQ13075 1403 aa25.87■■□□□ 1.73
GHDC-208ENST00000588352 ARHGAP31Q2M1Z3 1444 aa25.87■■□□□ 1.73
GHDC-208ENST00000588352 GCC2Q8IWJ2 1684 aa25.85■■□□□ 1.73
GHDC-208ENST00000588352 CEP152O94986 1710 aa25.84■■□□□ 1.73
GHDC-208ENST00000588352 EFCAB6Q5THR3 1501 aa25.82■■□□□ 1.72
GHDC-208ENST00000588352 SPATA31D1Q6ZQQ2 1576 aa25.82■■□□□ 1.72
GHDC-208ENST00000588352 MYO3AQ8NEV4 1616 aa25.81■■□□□ 1.72
GHDC-208ENST00000588352 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.81■■□□□ 1.72
GHDC-208ENST00000588352 ERVK-7P63135 1459 aa25.8■■□□□ 1.72
GHDC-208ENST00000588352 TNRQ92752 1358 aa25.8■■□□□ 1.72
GHDC-208ENST00000588352 ZNF142P52746 1687 aaPredicted RBP25.77■■□□□ 1.72
GHDC-208ENST00000588352 IQGAP3Q86VI3 1631 aa25.77■■□□□ 1.72
GHDC-208ENST00000588352 RPRD2Q5VT52 1461 aaKnown RBP25.76■■□□□ 1.71
GHDC-208ENST00000588352 CEP170BQ9Y4F5 1589 aaPredicted RBP25.75■■□□□ 1.71
GHDC-208ENST00000588352 NLRP1Q9C000 1473 aa25.75■■□□□ 1.71
GHDC-208ENST00000588352 FBXO31Q5XUX0 539 aaPredicted RBP25.75■■□□□ 1.71
GHDC-208ENST00000588352 TET3O43151 1660 aa25.74■■□□□ 1.71
GHDC-208ENST00000588352 SETD1BQ9UPS6 1966 aaKnown RBP25.73■■□□□ 1.71
GHDC-208ENST00000588352 A2ML1A8K2U0 1454 aa25.72■■□□□ 1.71
GHDC-208ENST00000588352 NUP155O75694 1391 aa25.7■■□□□ 1.71
GHDC-208ENST00000588352 HSPA2P54652 639 aa25.69■■□□□ 1.7
GHDC-208ENST00000588352 NOS1P29475 1434 aa25.68■■□□□ 1.7
GHDC-208ENST00000588352 PLA2R1Q13018 1463 aa25.66■■□□□ 1.7
GHDC-208ENST00000588352 SYNMO15061 1565 aa25.61■■□□□ 1.69
GHDC-208ENST00000588352 UGGT1Q9NYU2 1555 aa25.61■■□□□ 1.69
GHDC-208ENST00000588352 E9PCH4 1651 aa25.59■■□□□ 1.69
GHDC-208ENST00000588352 SETD5Q9C0A6 1442 aa25.59■■□□□ 1.69
GHDC-208ENST00000588352 ACIN1Q9UKV3 1341 aaKnown RBP25.59■■□□□ 1.69
GHDC-208ENST00000588352 KDM5AP29375 1690 aaKnown RBP25.52■■□□□ 1.68
GHDC-208ENST00000588352 THEMISQ8N1K5 641 aaPredicted RBP25.52■■□□□ 1.68
GHDC-208ENST00000588352 SLC52A1Q9NWF4 448 aa25.52■■□□□ 1.68
GHDC-208ENST00000588352 ADGRB3O60242 1522 aa25.52■■□□□ 1.68
GHDC-208ENST00000588352 STRCQ7RTU9 1775 aa25.51■■□□□ 1.67
GHDC-208ENST00000588352 PTPRTO14522 1441 aa25.51■■□□□ 1.67
GHDC-208ENST00000588352 PIK3C2BO00750 1634 aa25.51■■□□□ 1.67
GHDC-208ENST00000588352 UBR1Q8IWV7 1749 aa25.51■■□□□ 1.67
GHDC-208ENST00000588352 PKD2Q13563 968 aa25.5■■□□□ 1.67
GHDC-208ENST00000588352 TRIM52Q96A61 297 aa25.5■■□□□ 1.67
GHDC-208ENST00000588352 RAB3GAP2Q9H2M9 1393 aa25.5■■□□□ 1.67
GHDC-208ENST00000588352 DMRT2Q9Y5R5 561 aa25.48■■□□□ 1.67
GHDC-208ENST00000588352 SLIT1O75093 1534 aa25.47■■□□□ 1.67
GHDC-208ENST00000588352 ARHGAP23Q9P227 1491 aa25.47■■□□□ 1.67
GHDC-208ENST00000588352 IDI1Q13907 227 aa25.47■■□□□ 1.67
GHDC-208ENST00000588352 TRPM2O94759 1503 aa25.47■■□□□ 1.67
GHDC-208ENST00000588352 SLC4A1APQ9BWU0 796 aaKnown RBP25.45■■□□□ 1.66
GHDC-208ENST00000588352 SPHKAPQ2M3C7 1700 aa25.44■■□□□ 1.66
GHDC-208ENST00000588352 NEURL4Q96JN8 1562 aa25.44■■□□□ 1.66
GHDC-208ENST00000588352 HRCP23327 699 aa25.42■■□□□ 1.66
GHDC-208ENST00000588352 TMEM2Q9UHN6 1383 aa25.42■■□□□ 1.66
GHDC-208ENST00000588352 MED14O60244 1454 aa25.41■■□□□ 1.66
GHDC-208ENST00000588352 POLR1AO95602 1720 aaPredicted RBP25.4■■□□□ 1.66
GHDC-208ENST00000588352 NCKAP5LQ9HCH0 1330 aa25.4■■□□□ 1.66
GHDC-208ENST00000588352 SCAF11Q99590 1463 aaKnown RBP25.4■■□□□ 1.66
GHDC-208ENST00000588352 TMEM131LA2VDJ0 1609 aa25.39■■□□□ 1.66
GHDC-208ENST00000588352 ANKLE2Q86XL3 938 aa25.39■■□□□ 1.66
GHDC-208ENST00000588352 STAG3Q9UJ98 1225 aa25.39■■□□□ 1.66
GHDC-208ENST00000588352 CFAP65Q6ZU64 1925 aaKnown RBP25.38■■□□□ 1.65
GHDC-208ENST00000588352 MPHOSPH9Q99550 1183 aa25.37■■□□□ 1.65
GHDC-208ENST00000588352 NPHP4O75161 1426 aaPredicted RBP25.36■■□□□ 1.65
GHDC-208ENST00000588352 CLTCL1P53675 1640 aa25.34■■□□□ 1.65
GHDC-208ENST00000588352 ZFYVE9O95405 1425 aa25.34■■□□□ 1.65
GHDC-208ENST00000588352 EID1Q9Y6B2 187 aa25.3■■□□□ 1.64
GHDC-208ENST00000588352 IQGAP1P46940 1657 aa25.29■■□□□ 1.64
GHDC-208ENST00000588352 LTKP29376 864 aa25.28■■□□□ 1.64
GHDC-208ENST00000588352 TXNDC2Q86VQ3 553 aa25.28■■□□□ 1.64
GHDC-208ENST00000588352 RIMS2Q9UQ26 1411 aa25.28■■□□□ 1.64
GHDC-208ENST00000588352 TRIM26Q12899 539 aaPredicted RBP25.27■■□□□ 1.64
GHDC-208ENST00000588352 CCDC144AA2RUR9 1427 aa25.26■■□□□ 1.63
GHDC-208ENST00000588352 FOXD1Q16676 465 aa25.25■■□□□ 1.63
GHDC-208ENST00000588352 CHGAP10645 457 aaKnown RBP25.24■■□□□ 1.63
GHDC-208ENST00000588352 PLEKHG1Q9ULL1 1385 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms