RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 MLH3Q9UHC1 1453 aa15.24■□□□□ 0.03
CHMP1B-202ENST00000588284 DHX29Q7Z478 1369 aaKnown RBP15.23■□□□□ 0.03
CHMP1B-202ENST00000588284 ATP7AQ04656 1500 aa15.22■□□□□ 0.03
CHMP1B-202ENST00000588284 RAPGEF3O95398 923 aa15.21■□□□□ 0.03
CHMP1B-202ENST00000588284 NEUROD1Q13562 356 aa15.21■□□□□ 0.03
CHMP1B-202ENST00000588284 SIN3AQ96ST3 1273 aa15.21■□□□□ 0.03
CHMP1B-202ENST00000588284 ZFYVE16Q7Z3T8 1539 aa15.21■□□□□ 0.03
CHMP1B-202ENST00000588284 KDM5CP41229 1560 aa15.19■□□□□ 0.02
CHMP1B-202ENST00000588284 INO80Q9ULG1 1556 aaPredicted RBP15.19■□□□□ 0.02
CHMP1B-202ENST00000588284 PKD2Q13563 968 aa15.19■□□□□ 0.02
CHMP1B-202ENST00000588284 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.19■□□□□ 0.02
CHMP1B-202ENST00000588284 KDM5DQ9BY66 1539 aa15.18■□□□□ 0.02
CHMP1B-202ENST00000588284 PZPP20742 1482 aa15.18■□□□□ 0.02
CHMP1B-202ENST00000588284 KIF3BO15066 747 aa15.17■□□□□ 0.02
CHMP1B-202ENST00000588284 KANK1Q14678 1352 aa15.16■□□□□ 0.02
CHMP1B-202ENST00000588284 ANKRD30BQ9BXX2 1392 aa15.16■□□□□ 0.02
CHMP1B-202ENST00000588284 KIF13AQ9H1H9 1805 aa15.16■□□□□ 0.02
CHMP1B-202ENST00000588284 A2MP01023 1474 aa15.15■□□□□ 0.02
CHMP1B-202ENST00000588284 MAGI2Q86UL8 1455 aa15.15■□□□□ 0.02
CHMP1B-202ENST00000588284 TSPOAP1O95153 1857 aa15.15■□□□□ 0.02
CHMP1B-202ENST00000588284 KIDINS220Q9ULH0 1771 aa15.15■□□□□ 0.02
CHMP1B-202ENST00000588284 HECW2Q9P2P5 1572 aa15.15■□□□□ 0.02
CHMP1B-202ENST00000588284 UNC13BO14795 1591 aa15.14■□□□□ 0.01
CHMP1B-202ENST00000588284 TONSLQ96HA7 1378 aa15.13■□□□□ 0.01
CHMP1B-202ENST00000588284 PPRC1Q5VV67 1664 aaKnown RBP15.13■□□□□ 0.01
CHMP1B-202ENST00000588284 RICTORQ6R327 1708 aa15.12■□□□□ 0.01
CHMP1B-202ENST00000588284 EIF2AK4Q9P2K8 1649 aaKnown RBP15.11■□□□□ 0.01
CHMP1B-202ENST00000588284 PPP1R15AO75807 674 aaPredicted RBP15.11■□□□□ 0.01
CHMP1B-202ENST00000588284 FAM135AQ9P2D6 1515 aa15.11■□□□□ 0.01
CHMP1B-202ENST00000588284 ZMYM4Q5VZL5 1548 aa15.09■□□□□ 0.01
CHMP1B-202ENST00000588284 IQGAP3Q86VI3 1631 aa15.08■□□□□ 0
CHMP1B-202ENST00000588284 ATP10AO60312 1499 aa15.08■□□□□ 0
CHMP1B-202ENST00000588284 SLC4A2P04920 1241 aa15.06■□□□□ 0
CHMP1B-202ENST00000588284 GGT6Q6P531 493 aa15.06■□□□□ 0
CHMP1B-202ENST00000588284 RPRD2Q5VT52 1461 aaKnown RBP15.06■□□□□ 0
CHMP1B-202ENST00000588284 ILDR1Q86SU0 546 aaPredicted RBP15.05■□□□□ -0
CHMP1B-202ENST00000588284 FRMPD1Q5SYB0 1578 aa15.05■□□□□ -0
CHMP1B-202ENST00000588284 DEPDC5O75140 1603 aa15.05■□□□□ -0
CHMP1B-202ENST00000588284 ABCA6Q8N139 1617 aa15.04■□□□□ -0
CHMP1B-202ENST00000588284 DIP2CQ9Y2E4 1556 aa15.04■□□□□ -0
CHMP1B-202ENST00000588284 YEATS2Q9ULM3 1422 aa15.04■□□□□ -0
CHMP1B-202ENST00000588284 FOXD4L1Q9NU39 408 aa15.04■□□□□ -0
CHMP1B-202ENST00000588284 VWDEQ8N2E2 1590 aa15.02■□□□□ -0
CHMP1B-202ENST00000588284 COL17A1Q9UMD9 1497 aaPredicted RBP15.02■□□□□ -0
CHMP1B-202ENST00000588284 WASHC2CQ9Y4E1 1318 aa15.02■□□□□ -0
CHMP1B-202ENST00000588284 L3MBTL2Q969R5 705 aa15.02■□□□□ -0
CHMP1B-202ENST00000588284 BCORL1Q5H9F3 1711 aa15.02□□□□□ -0.01
CHMP1B-202ENST00000588284 ZNF316A6NFI3 1004 aaPredicted RBP15.01□□□□□ -0.01
CHMP1B-202ENST00000588284 PRDM15P57071 1507 aaPredicted RBP15.01□□□□□ -0.01
CHMP1B-202ENST00000588284 RNF17Q9BXT8 1623 aaKnown RBP15□□□□□ -0.01
CHMP1B-202ENST00000588284 REREQ9P2R6 1566 aa15□□□□□ -0.01
CHMP1B-202ENST00000588284 LMTK2Q8IWU2 1503 aa15□□□□□ -0.01
CHMP1B-202ENST00000588284 CCDC144AA2RUR9 1427 aa15□□□□□ -0.01
CHMP1B-202ENST00000588284 AGLP35573 1532 aa14.99□□□□□ -0.01
CHMP1B-202ENST00000588284 TET3O43151 1660 aa14.99□□□□□ -0.01
CHMP1B-202ENST00000588284 ZBTB22O15209 634 aa14.98□□□□□ -0.01
CHMP1B-202ENST00000588284 MROH1Q8NDA8 1641 aa14.97□□□□□ -0.01
CHMP1B-202ENST00000588284 PTPRTO14522 1441 aa14.97□□□□□ -0.01
CHMP1B-202ENST00000588284 STAC3Q96MF2 364 aa14.96□□□□□ -0.01
CHMP1B-202ENST00000588284 PLA2R1Q13018 1463 aa14.95□□□□□ -0.02
CHMP1B-202ENST00000588284 ESF1Q9H501 851 aaKnown RBP14.93□□□□□ -0.02
CHMP1B-202ENST00000588284 E9PCH4 1651 aa14.93□□□□□ -0.02
CHMP1B-202ENST00000588284 ARHGAP31Q2M1Z3 1444 aa14.92□□□□□ -0.02
CHMP1B-202ENST00000588284 ARHGEF40Q8TER5 1519 aa14.92□□□□□ -0.02
CHMP1B-202ENST00000588284 KDM4FA0A1W2PPD8 638 aa14.92□□□□□ -0.02
CHMP1B-202ENST00000588284 ABCC3O15438 1527 aa14.92□□□□□ -0.02
CHMP1B-202ENST00000588284 EFCAB6Q5THR3 1501 aa14.92□□□□□ -0.02
CHMP1B-202ENST00000588284 DCAF11Q8TEB1 546 aa14.91□□□□□ -0.02
CHMP1B-202ENST00000588284 ARID4BQ4LE39 1312 aaPredicted RBP14.91□□□□□ -0.02
CHMP1B-202ENST00000588284 RGL3Q3MIN7 710 aa14.9□□□□□ -0.02
CHMP1B-202ENST00000588284 TRPM2O94759 1503 aa14.9□□□□□ -0.02
CHMP1B-202ENST00000588284 ZC3H13Q5T200 1668 aaKnown RBP14.89□□□□□ -0.03
CHMP1B-202ENST00000588284 SLC52A1Q9NWF4 448 aa14.88□□□□□ -0.03
CHMP1B-202ENST00000588284 KDM2AQ9Y2K7 1162 aa14.88□□□□□ -0.03
CHMP1B-202ENST00000588284 NPATQ14207 1427 aa14.88□□□□□ -0.03
CHMP1B-202ENST00000588284 CNTLNQ9NXG0 1405 aa14.88□□□□□ -0.03
CHMP1B-202ENST00000588284 CEP152O94986 1710 aa14.87□□□□□ -0.03
CHMP1B-202ENST00000588284 SPHKAPQ2M3C7 1700 aa14.87□□□□□ -0.03
CHMP1B-202ENST00000588284 MLECQ14165 292 aa14.87□□□□□ -0.03
CHMP1B-202ENST00000588284 NBPF8Q3BBV2 869 aa14.87□□□□□ -0.03
CHMP1B-202ENST00000588284 UHRF1BP1Q6BDS2 1440 aa14.86□□□□□ -0.03
CHMP1B-202ENST00000588284 NOS1P29475 1434 aa14.84□□□□□ -0.03
CHMP1B-202ENST00000588284 EIF4G2P78344 907 aaKnown RBP eCLIP14.84□□□□□ -0.03
CHMP1B-202ENST00000588284 NEURL4Q96JN8 1562 aa14.84□□□□□ -0.03
CHMP1B-202ENST00000588284 CAMSAP1Q5T5Y3 1602 aa14.84□□□□□ -0.03
CHMP1B-202ENST00000588284 SPATA31E1Q6ZUB1 1445 aa14.83□□□□□ -0.03
CHMP1B-202ENST00000588284 ZNF326Q5BKZ1 582 aaKnown RBP14.83□□□□□ -0.04
CHMP1B-202ENST00000588284 RPGRIP1LQ68CZ1 1315 aa14.83□□□□□ -0.04
CHMP1B-202ENST00000588284 MYCNP04198 464 aaPredicted RBP14.82□□□□□ -0.04
CHMP1B-202ENST00000588284 CHGAP10645 457 aaKnown RBP14.81□□□□□ -0.04
CHMP1B-202ENST00000588284 U3KPZ7 1027 aaPredicted RBP14.8□□□□□ -0.04
CHMP1B-202ENST00000588284 ZMYM3Q14202 1370 aa14.8□□□□□ -0.04
CHMP1B-202ENST00000588284 CLTCL1P53675 1640 aa14.8□□□□□ -0.04
CHMP1B-202ENST00000588284 IDI1Q13907 227 aa14.79□□□□□ -0.04
CHMP1B-202ENST00000588284 DIEXFQ68CQ4 756 aaKnown RBP14.79□□□□□ -0.04
CHMP1B-202ENST00000588284 KIF1BO60333 1816 aa14.78□□□□□ -0.04
CHMP1B-202ENST00000588284 HSPA5P11021 654 aaKnown RBP14.77□□□□□ -0.05
CHMP1B-202ENST00000588284 FBXO31Q5XUX0 539 aaPredicted RBP14.77□□□□□ -0.05
CHMP1B-202ENST00000588284 CARD11Q9BXL7 1154 aa14.77□□□□□ -0.05
CHMP1B-202ENST00000588284 CFAP65Q6ZU64 1925 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms