RNA–Protein interactions for RNA: ENST00000587580.1

CHAF1A-205, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 3

Gene CHAF1A, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-205ENST00000587580 RNF17Q9BXT8 1623 aaKnown RBP36.23■■■■□ 3.39
CHAF1A-205ENST00000587580 KDM5DQ9BY66 1539 aa36.23■■■■□ 3.39
CHAF1A-205ENST00000587580 FAM135AQ9P2D6 1515 aa36.23■■■■□ 3.39
CHAF1A-205ENST00000587580 UHRF1BP1Q6BDS2 1440 aa36.22■■■■□ 3.39
CHAF1A-205ENST00000587580 HSPA2P54652 639 aa36.2■■■■□ 3.39
CHAF1A-205ENST00000587580 RRP7BPQ9NSQ0 103 aa36.2■■■■□ 3.39
CHAF1A-205ENST00000587580 CHIC2Q9UKJ5 165 aa36.2■■■■□ 3.39
CHAF1A-205ENST00000587580 NPATQ14207 1427 aa36.18■■■■□ 3.38
CHAF1A-205ENST00000587580 ANKRD30AQ9BXX3 1397 aa36.17■■■■□ 3.38
CHAF1A-205ENST00000587580 ERBINQ96RT1 1412 aa36.17■■■■□ 3.38
CHAF1A-205ENST00000587580 WASHC2CQ9Y4E1 1318 aa36.13■■■■□ 3.37
CHAF1A-205ENST00000587580 ADGRL2O95490 1459 aa36.13■■■■□ 3.37
CHAF1A-205ENST00000587580 PTPRKQ15262 1439 aa36.13■■■■□ 3.37
CHAF1A-205ENST00000587580 MROH1Q8NDA8 1641 aa36.12■■■■□ 3.37
CHAF1A-205ENST00000587580 NCOA1Q15788 1441 aa36.11■■■■□ 3.37
CHAF1A-205ENST00000587580 ZC3H13Q5T200 1668 aaKnown RBP36.1■■■■□ 3.37
CHAF1A-205ENST00000587580 ABCC3O15438 1527 aa36.08■■■■□ 3.37
CHAF1A-205ENST00000587580 PZPP20742 1482 aa36.05■■■■□ 3.36
CHAF1A-205ENST00000587580 MYO3AQ8NEV4 1616 aa36.05■■■■□ 3.36
CHAF1A-205ENST00000587580 PRDM15P57071 1507 aaPredicted RBP36.04■■■■□ 3.36
CHAF1A-205ENST00000587580 CEP152O94986 1710 aa36.03■■■■□ 3.36
CHAF1A-205ENST00000587580 DEPDC5O75140 1603 aa36.01■■■■□ 3.36
CHAF1A-205ENST00000587580 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.01■■■■□ 3.35
CHAF1A-205ENST00000587580 ZNF142P52746 1687 aaPredicted RBP35.99■■■■□ 3.35
CHAF1A-205ENST00000587580 CAMSAP1Q5T5Y3 1602 aa35.97■■■■□ 3.35
CHAF1A-205ENST00000587580 FBXO31Q5XUX0 539 aaPredicted RBP35.96■■■■□ 3.35
CHAF1A-205ENST00000587580 CEP170BQ9Y4F5 1589 aaPredicted RBP35.95■■■■□ 3.35
CHAF1A-205ENST00000587580 RRBP1Q9P2E9 1410 aaKnown RBP35.95■■■■□ 3.35
CHAF1A-205ENST00000587580 TNRQ92752 1358 aa35.93■■■■□ 3.34
CHAF1A-205ENST00000587580 ITGAEP38570 1179 aa35.93■■■■□ 3.34
CHAF1A-205ENST00000587580 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.93■■■■□ 3.341e-11■■■■■ 36.5
CHAF1A-205ENST00000587580 ANKRD50Q9ULJ7 1429 aa35.92■■■■□ 3.34
CHAF1A-205ENST00000587580 STRCQ7RTU9 1775 aa35.92■■■■□ 3.34
CHAF1A-205ENST00000587580 ROCK1Q13464 1354 aa35.9■■■■□ 3.34
CHAF1A-205ENST00000587580 KANK1Q14678 1352 aa35.9■■■■□ 3.34
CHAF1A-205ENST00000587580 A2ML1A8K2U0 1454 aa35.86■■■■□ 3.33
CHAF1A-205ENST00000587580 SPATA31D1Q6ZQQ2 1576 aa35.85■■■■□ 3.33
CHAF1A-205ENST00000587580 VWDEQ8N2E2 1590 aa35.85■■■■□ 3.33
CHAF1A-205ENST00000587580 ERVK-7P63135 1459 aa35.84■■■■□ 3.33
CHAF1A-205ENST00000587580 LMTK2Q8IWU2 1503 aa35.81■■■■□ 3.32
CHAF1A-205ENST00000587580 ARHGAP31Q2M1Z3 1444 aa35.81■■■■□ 3.32
CHAF1A-205ENST00000587580 CFAP65Q6ZU64 1925 aaKnown RBP35.8■■■■□ 3.32
CHAF1A-205ENST00000587580 NLRP1Q9C000 1473 aa35.8■■■■□ 3.32
CHAF1A-205ENST00000587580 UNC13BO14795 1591 aa35.76■■■■□ 3.32
CHAF1A-205ENST00000587580 PLA2R1Q13018 1463 aa35.76■■■■□ 3.32
CHAF1A-205ENST00000587580 DMRT2Q9Y5R5 561 aa35.76■■■■□ 3.32
CHAF1A-205ENST00000587580 EFCAB6Q5THR3 1501 aa35.73■■■■□ 3.31
CHAF1A-205ENST00000587580 PTPRTO14522 1441 aa35.7■■■■□ 3.31
CHAF1A-205ENST00000587580 UGGT1Q9NYU2 1555 aa35.7■■■■□ 3.31
CHAF1A-205ENST00000587580 NCKAP5LQ9HCH0 1330 aa35.67■■■■□ 3.3
CHAF1A-205ENST00000587580 TET3O43151 1660 aa35.65■■■■□ 3.3
CHAF1A-205ENST00000587580 PKD2Q13563 968 aa35.63■■■■□ 3.29
CHAF1A-205ENST00000587580 GCC2Q8IWJ2 1684 aa35.62■■■■□ 3.29
CHAF1A-205ENST00000587580 IQGAP3Q86VI3 1631 aa35.61■■■■□ 3.29
CHAF1A-205ENST00000587580 POLR1AO95602 1720 aaPredicted RBP35.61■■■■□ 3.29
CHAF1A-205ENST00000587580 THEMISQ8N1K5 641 aaPredicted RBP35.6■■■■□ 3.29
CHAF1A-205ENST00000587580 UBR1Q8IWV7 1749 aa35.58■■■■□ 3.29
CHAF1A-205ENST00000587580 RPRD2Q5VT52 1461 aaKnown RBP35.58■■■■□ 3.29
CHAF1A-205ENST00000587580 SYNMO15061 1565 aa35.57■■■■□ 3.28
CHAF1A-205ENST00000587580 NOS1P29475 1434 aa35.56■■■■□ 3.28
CHAF1A-205ENST00000587580 NAIPQ13075 1403 aa35.56■■■■□ 3.28
CHAF1A-205ENST00000587580 NUP155O75694 1391 aa35.55■■■■□ 3.28
CHAF1A-205ENST00000587580 PIK3C2BO00750 1634 aa35.54■■■■□ 3.28
CHAF1A-205ENST00000587580 NEURL4Q96JN8 1562 aa35.53■■■■□ 3.28
CHAF1A-205ENST00000587580 E9PCH4 1651 aa35.51■■■■□ 3.28
CHAF1A-205ENST00000587580 HFM1A2PYH4 1435 aa35.5■■■■□ 3.27
CHAF1A-205ENST00000587580 ANKLE2Q86XL3 938 aa35.49■■■■□ 3.27
CHAF1A-205ENST00000587580 IDI1Q13907 227 aa35.44■■■■□ 3.26
CHAF1A-205ENST00000587580 KDM5AP29375 1690 aaKnown RBP35.43■■■■□ 3.26
CHAF1A-205ENST00000587580 ILDR1Q86SU0 546 aaPredicted RBP35.43■■■■□ 3.26
CHAF1A-205ENST00000587580 CERKQ8TCT0 537 aa35.42■■■■□ 3.26
CHAF1A-205ENST00000587580 STAG3Q9UJ98 1225 aa35.42■■■■□ 3.26
CHAF1A-205ENST00000587580 SLIT1O75093 1534 aa35.41■■■■□ 3.26
CHAF1A-205ENST00000587580 LTBP4Q8N2S1 1624 aa35.4■■■■□ 3.26
CHAF1A-205ENST00000587580 SLC52A1Q9NWF4 448 aa35.4■■■■□ 3.26
CHAF1A-205ENST00000587580 ADGRB3O60242 1522 aa35.4■■■■□ 3.26
CHAF1A-205ENST00000587580 MED14O60244 1454 aa35.4■■■■□ 3.26
CHAF1A-205ENST00000587580 ARHGAP23Q9P227 1491 aa35.4■■■■□ 3.26
CHAF1A-205ENST00000587580 NPHP4O75161 1426 aaPredicted RBP35.4■■■■□ 3.26
CHAF1A-205ENST00000587580 IQGAP1P46940 1657 aa35.37■■■■□ 3.25
CHAF1A-205ENST00000587580 SCAF11Q99590 1463 aaKnown RBP35.36■■■■□ 3.25
CHAF1A-205ENST00000587580 ZNF335Q9H4Z2 1342 aaPredicted RBP35.35■■■■□ 3.25
CHAF1A-205ENST00000587580 FBXO41Q8TF61 875 aa35.34■■■■□ 3.25
CHAF1A-205ENST00000587580 TMEM2Q9UHN6 1383 aa35.33■■■■□ 3.25
CHAF1A-205ENST00000587580 LTKP29376 864 aa35.29■■■■□ 3.24
CHAF1A-205ENST00000587580 TXNDC2Q86VQ3 553 aa35.29■■■■□ 3.24
CHAF1A-205ENST00000587580 TRIM52Q96A61 297 aa35.29■■■■□ 3.24
CHAF1A-205ENST00000587580 SPHKAPQ2M3C7 1700 aa35.29■■■■□ 3.24
CHAF1A-205ENST00000587580 MYO5BQ9ULV0 1848 aa35.28■■■■□ 3.24
CHAF1A-205ENST00000587580 EID1Q9Y6B2 187 aa35.28■■■■□ 3.24
CHAF1A-205ENST00000587580 TMEM131LA2VDJ0 1609 aa35.25■■■■□ 3.23
CHAF1A-205ENST00000587580 CHGAP10645 457 aaKnown RBP35.2■■■■□ 3.23
CHAF1A-205ENST00000587580 IQSEC2Q5JU85 1478 aa35.19■■■■□ 3.22
CHAF1A-205ENST00000587580 CPS1P31327 1500 aa35.16■■■■□ 3.22
CHAF1A-205ENST00000587580 SLC4A1APQ9BWU0 796 aaKnown RBP35.15■■■■□ 3.22
CHAF1A-205ENST00000587580 TRPM2O94759 1503 aa35.15■■■■□ 3.22
CHAF1A-205ENST00000587580 ZFYVE9O95405 1425 aa35.15■■■■□ 3.22
CHAF1A-205ENST00000587580 RIMS2Q9UQ26 1411 aa35.14■■■■□ 3.22
CHAF1A-205ENST00000587580 SETD5Q9C0A6 1442 aa35.12■■■■□ 3.21
CHAF1A-205ENST00000587580 CLTCL1P53675 1640 aa35.11■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms