RNA–Protein interactions for RNA: ENST00000587387.5

GRN-208, Transcript of granulin precursor, humanhuman

TSL 4

Gene GRN, Length 614 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-208ENST00000587387 KIF15Q9NS87 1388 aa23.17■■□□□ 1.3
GRN-208ENST00000587387 MROH1Q8NDA8 1641 aa23.17■■□□□ 1.3
GRN-208ENST00000587387 SHANK2Q9UPX8 1470 aa23.17■■□□□ 1.3
GRN-208ENST00000587387 PTPRKQ15262 1439 aa23.16■■□□□ 1.3
GRN-208ENST00000587387 STRCQ7RTU9 1775 aa23.16■■□□□ 1.3
GRN-208ENST00000587387 CEP152O94986 1710 aa23.16■■□□□ 1.3
GRN-208ENST00000587387 UHRF1BP1Q6BDS2 1440 aa23.16■■□□□ 1.3
GRN-208ENST00000587387 RNF17Q9BXT8 1623 aaKnown RBP23.15■■□□□ 1.3
GRN-208ENST00000587387 DUOX2Q9NRD8 1548 aa23.15■■□□□ 1.3
GRN-208ENST00000587387 WASHC2CQ9Y4E1 1318 aa23.14■■□□□ 1.3
GRN-208ENST00000587387 KDM5DQ9BY66 1539 aa23.13■■□□□ 1.29
GRN-208ENST00000587387 EIF2AK4Q9P2K8 1649 aaKnown RBP23.13■■□□□ 1.29
GRN-208ENST00000587387 ITGAEP38570 1179 aa23.11■■□□□ 1.29
GRN-208ENST00000587387 MYO3AQ8NEV4 1616 aa23.11■■□□□ 1.29
GRN-208ENST00000587387 PPP6R1Q9UPN7 881 aa23.1■■□□□ 1.29
GRN-208ENST00000587387 NPATQ14207 1427 aa23.09■■□□□ 1.29
GRN-208ENST00000587387 NCOA1Q15788 1441 aa23.09■■□□□ 1.29
GRN-208ENST00000587387 ABCC3O15438 1527 aa23.09■■□□□ 1.29
GRN-208ENST00000587387 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.09■■□□□ 1.29
GRN-208ENST00000587387 ANKRD30AQ9BXX3 1397 aa23.07■■□□□ 1.28
GRN-208ENST00000587387 ERBINQ96RT1 1412 aa23.04■■□□□ 1.28
GRN-208ENST00000587387 ADGRL2O95490 1459 aa23.04■■□□□ 1.28
GRN-208ENST00000587387 PZPP20742 1482 aa23.04■■□□□ 1.28
GRN-208ENST00000587387 CAMSAP1Q5T5Y3 1602 aa23.04■■□□□ 1.28
GRN-208ENST00000587387 ZNF142P52746 1687 aaPredicted RBP23.03■■□□□ 1.28
GRN-208ENST00000587387 CEP170BQ9Y4F5 1589 aaPredicted RBP23.02■■□□□ 1.28
GRN-208ENST00000587387 DEPDC5O75140 1603 aa23.02■■□□□ 1.28
GRN-208ENST00000587387 ZC3H13Q5T200 1668 aaKnown RBP23.02■■□□□ 1.28
GRN-208ENST00000587387 PRDM15P57071 1507 aaPredicted RBP23.01■■□□□ 1.27
GRN-208ENST00000587387 NCKAP5LQ9HCH0 1330 aa23■■□□□ 1.27
GRN-208ENST00000587387 TNRQ92752 1358 aa23■■□□□ 1.27
GRN-208ENST00000587387 FAM135AQ9P2D6 1515 aa22.98■■□□□ 1.27
GRN-208ENST00000587387 ANKRD50Q9ULJ7 1429 aa22.95■■□□□ 1.26
GRN-208ENST00000587387 A2ML1A8K2U0 1454 aa22.94■■□□□ 1.26
GRN-208ENST00000587387 ILDR1Q86SU0 546 aaPredicted RBP22.94■■□□□ 1.26
GRN-208ENST00000587387 ERVK-7P63135 1459 aa22.93■■□□□ 1.26
GRN-208ENST00000587387 SPATA31D1Q6ZQQ2 1576 aa22.93■■□□□ 1.26
GRN-208ENST00000587387 VWDEQ8N2E2 1590 aa22.93■■□□□ 1.26
GRN-208ENST00000587387 RRBP1Q9P2E9 1410 aaKnown RBP22.91■■□□□ 1.26
GRN-208ENST00000587387 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.88■■□□□ 1.254e-11■■■■■ 30.2
GRN-208ENST00000587387 ROCK1Q13464 1354 aa22.87■■□□□ 1.25
GRN-208ENST00000587387 KANK1Q14678 1352 aa22.87■■□□□ 1.25
GRN-208ENST00000587387 UGGT1Q9NYU2 1555 aa22.85■■□□□ 1.25
GRN-208ENST00000587387 UNC13BO14795 1591 aa22.84■■□□□ 1.25
GRN-208ENST00000587387 ARHGAP31Q2M1Z3 1444 aa22.84■■□□□ 1.25
GRN-208ENST00000587387 LMTK2Q8IWU2 1503 aa22.84■■□□□ 1.25
GRN-208ENST00000587387 POLR1AO95602 1720 aaPredicted RBP22.84■■□□□ 1.25
GRN-208ENST00000587387 NLRP1Q9C000 1473 aa22.84■■□□□ 1.25
GRN-208ENST00000587387 PTPRTO14522 1441 aa22.83■■□□□ 1.25
GRN-208ENST00000587387 UBR1Q8IWV7 1749 aa22.83■■□□□ 1.25
GRN-208ENST00000587387 PLA2R1Q13018 1463 aa22.83■■□□□ 1.25
GRN-208ENST00000587387 EFCAB6Q5THR3 1501 aa22.82■■□□□ 1.24
GRN-208ENST00000587387 SYNMO15061 1565 aa22.82■■□□□ 1.24
GRN-208ENST00000587387 NEURL4Q96JN8 1562 aa22.82■■□□□ 1.24
GRN-208ENST00000587387 DMRT2Q9Y5R5 561 aa22.82■■□□□ 1.24
GRN-208ENST00000587387 PIK3C2BO00750 1634 aa22.82■■□□□ 1.24
GRN-208ENST00000587387 E9PCH4 1651 aa22.79■■□□□ 1.24
GRN-208ENST00000587387 TET3O43151 1660 aa22.79■■□□□ 1.24
GRN-208ENST00000587387 CERKQ8TCT0 537 aa22.79■■□□□ 1.24
GRN-208ENST00000587387 ZNF335Q9H4Z2 1342 aaPredicted RBP22.78■■□□□ 1.24
GRN-208ENST00000587387 GCC2Q8IWJ2 1684 aa22.77■■□□□ 1.24
GRN-208ENST00000587387 THEMISQ8N1K5 641 aaPredicted RBP22.77■■□□□ 1.24
GRN-208ENST00000587387 LTBP4Q8N2S1 1624 aa22.76■■□□□ 1.23
GRN-208ENST00000587387 MYO5BQ9ULV0 1848 aa22.76■■□□□ 1.23
GRN-208ENST00000587387 PKD2Q13563 968 aa22.76■■□□□ 1.23
GRN-208ENST00000587387 IDI1Q13907 227 aa22.76■■□□□ 1.23
GRN-208ENST00000587387 IQGAP3Q86VI3 1631 aa22.75■■□□□ 1.23
GRN-208ENST00000587387 NUP155O75694 1391 aa22.75■■□□□ 1.23
GRN-208ENST00000587387 NOS1P29475 1434 aa22.74■■□□□ 1.23
GRN-208ENST00000587387 NAIPQ13075 1403 aa22.74■■□□□ 1.23
GRN-208ENST00000587387 LTKP29376 864 aa22.72■■□□□ 1.23
GRN-208ENST00000587387 ANKLE2Q86XL3 938 aa22.72■■□□□ 1.23
GRN-208ENST00000587387 FBXO41Q8TF61 875 aa22.7■■□□□ 1.22
GRN-208ENST00000587387 SENP3Q9H4L4 574 aaPredicted RBP22.7■■□□□ 1.22
GRN-208ENST00000587387 IQGAP1P46940 1657 aa22.68■■□□□ 1.22
GRN-208ENST00000587387 NPHP4O75161 1426 aaPredicted RBP22.67■■□□□ 1.22
GRN-208ENST00000587387 STAG3Q9UJ98 1225 aa22.66■■□□□ 1.22
GRN-208ENST00000587387 STRCP1A6NGW2 1772 aa22.66■■□□□ 1.22
GRN-208ENST00000587387 TXNDC2Q86VQ3 553 aa22.65■■□□□ 1.22
GRN-208ENST00000587387 RPRD2Q5VT52 1461 aaKnown RBP22.65■■□□□ 1.22
GRN-208ENST00000587387 ARHGAP23Q9P227 1491 aa22.65■■□□□ 1.22
GRN-208ENST00000587387 MED14O60244 1454 aa22.64■■□□□ 1.21
GRN-208ENST00000587387 SLIT1O75093 1534 aa22.63■■□□□ 1.21
GRN-208ENST00000587387 HFM1A2PYH4 1435 aa22.63■■□□□ 1.21
GRN-208ENST00000587387 ADGRB3O60242 1522 aa22.62■■□□□ 1.21
GRN-208ENST00000587387 SCAF11Q99590 1463 aaKnown RBP22.61■■□□□ 1.21
GRN-208ENST00000587387 TRIM52Q96A61 297 aa22.61■■□□□ 1.21
GRN-208ENST00000587387 TMEM2Q9UHN6 1383 aa22.61■■□□□ 1.21
GRN-208ENST00000587387 TMEM131LA2VDJ0 1609 aa22.6■■□□□ 1.21
GRN-208ENST00000587387 CHGAP10645 457 aaKnown RBP22.6■■□□□ 1.21
GRN-208ENST00000587387 KDM5AP29375 1690 aaKnown RBP22.6■■□□□ 1.21
GRN-208ENST00000587387 SPHKAPQ2M3C7 1700 aa22.6■■□□□ 1.21
GRN-208ENST00000587387 NUTM2DQ5VT03 806 aaPredicted RBP22.58■■□□□ 1.21
GRN-208ENST00000587387 SLC52A1Q9NWF4 448 aa22.58■■□□□ 1.21
GRN-208ENST00000587387 FOXD1Q16676 465 aa22.54■■□□□ 1.2
GRN-208ENST00000587387 EID1Q9Y6B2 187 aa22.54■■□□□ 1.2
GRN-208ENST00000587387 SLC26A8Q96RN1 970 aa22.53■■□□□ 1.2
GRN-208ENST00000587387 CLTCL1P53675 1640 aa22.51■■□□□ 1.19
GRN-208ENST00000587387 ZFYVE9O95405 1425 aa22.5■■□□□ 1.19
GRN-208ENST00000587387 RIMS2Q9UQ26 1411 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms