RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 AGLP35573 1532 aa22.2■■□□□ 1.14
NFIX-208ENST00000587260 MROH1Q8NDA8 1641 aa22.2■■□□□ 1.14
NFIX-208ENST00000587260 KIF3BO15066 747 aa22.19■■□□□ 1.14
NFIX-208ENST00000587260 PRDM15P57071 1507 aaPredicted RBP22.17■■□□□ 1.14
NFIX-208ENST00000587260 ACIN1Q9UKV3 1341 aaKnown RBP22.16■■□□□ 1.14
NFIX-208ENST00000587260 ARID4BQ4LE39 1312 aaPredicted RBP22.15■■□□□ 1.14
NFIX-208ENST00000587260 CEP152O94986 1710 aa22.15■■□□□ 1.14
NFIX-208ENST00000587260 TRIM52Q96A61 297 aa22.13■■□□□ 1.13
NFIX-208ENST00000587260 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.13■■□□□ 1.131e-8■■■■■ 27.4
NFIX-208ENST00000587260 IQGAP3Q86VI3 1631 aa22.13■■□□□ 1.13
NFIX-208ENST00000587260 KDM5DQ9BY66 1539 aa22.12■■□□□ 1.13
NFIX-208ENST00000587260 MLECQ14165 292 aa22.11■■□□□ 1.13
NFIX-208ENST00000587260 GGT6Q6P531 493 aa22.11■■□□□ 1.13
NFIX-208ENST00000587260 FAM135AQ9P2D6 1515 aa22.1■■□□□ 1.13
NFIX-208ENST00000587260 NUP155O75694 1391 aa22.09■■□□□ 1.13
NFIX-208ENST00000587260 VWDEQ8N2E2 1590 aa22.09■■□□□ 1.13
NFIX-208ENST00000587260 ZC3H13Q5T200 1668 aaKnown RBP22.09■■□□□ 1.13
NFIX-208ENST00000587260 PZPP20742 1482 aa22.08■■□□□ 1.12
NFIX-208ENST00000587260 CLTCQ00610 1675 aaKnown RBP22.08■■□□□ 1.12
NFIX-208ENST00000587260 FER1L4A9Z1Z3 1794 aa22.07■■□□□ 1.12
NFIX-208ENST00000587260 KANK1Q14678 1352 aa22.06■■□□□ 1.12
NFIX-208ENST00000587260 ABCC3O15438 1527 aa22.06■■□□□ 1.12
NFIX-208ENST00000587260 CAMSAP1Q5T5Y3 1602 aa22.05■■□□□ 1.12
NFIX-208ENST00000587260 TET3O43151 1660 aa22.05■■□□□ 1.12
NFIX-208ENST00000587260 DHX57Q6P158 1386 aaKnown RBP22.04■■□□□ 1.12
NFIX-208ENST00000587260 MADDQ8WXG6 1647 aa22.02■■□□□ 1.11
NFIX-208ENST00000587260 E9PCH4 1651 aa22.01■■□□□ 1.11
NFIX-208ENST00000587260 CCER1Q8TC90 406 aaPredicted RBP22.01■■□□□ 1.11
NFIX-208ENST00000587260 EFCAB6Q5THR3 1501 aa22■■□□□ 1.11
NFIX-208ENST00000587260 LMTK2Q8IWU2 1503 aa22■■□□□ 1.11
NFIX-208ENST00000587260 WASHC2CQ9Y4E1 1318 aa22■■□□□ 1.11
NFIX-208ENST00000587260 ADAMTSL3P82987 1691 aa21.99■■□□□ 1.11
NFIX-208ENST00000587260 SLC4A1APQ9BWU0 796 aaKnown RBP21.99■■□□□ 1.11
NFIX-208ENST00000587260 RIMS1Q86UR5 1692 aaKnown RBP21.99■■□□□ 1.11
NFIX-208ENST00000587260 MPHOSPH9Q99550 1183 aa21.97■■□□□ 1.11
NFIX-208ENST00000587260 CLSPNQ9HAW4 1339 aa21.97■■□□□ 1.11
NFIX-208ENST00000587260 MROH2AA6NES4 1674 aa21.96■■□□□ 1.11
NFIX-208ENST00000587260 ESF1Q9H501 851 aaKnown RBP21.95■■□□□ 1.1
NFIX-208ENST00000587260 FOXD1Q16676 465 aa21.93■■□□□ 1.1
NFIX-208ENST00000587260 CFAP65Q6ZU64 1925 aaKnown RBP21.93■■□□□ 1.1
NFIX-208ENST00000587260 PKD2Q13563 968 aa21.92■■□□□ 1.1
NFIX-208ENST00000587260 C3P01024 1663 aa21.92■■□□□ 1.1
NFIX-208ENST00000587260 PPP6R1Q9UPN7 881 aa21.91■■□□□ 1.1
NFIX-208ENST00000587260 SPHKAPQ2M3C7 1700 aa21.91■■□□□ 1.1
NFIX-208ENST00000587260 NPATQ14207 1427 aa21.91■■□□□ 1.1
NFIX-208ENST00000587260 CNTLNQ9NXG0 1405 aa21.91■■□□□ 1.1
NFIX-208ENST00000587260 PREX1Q8TCU6 1659 aa21.9■■□□□ 1.1
NFIX-208ENST00000587260 RPRD2Q5VT52 1461 aaKnown RBP21.87■■□□□ 1.09
NFIX-208ENST00000587260 ARHGAP31Q2M1Z3 1444 aa21.86■■□□□ 1.09
NFIX-208ENST00000587260 ZMYM3Q14202 1370 aa21.85■■□□□ 1.09
NFIX-208ENST00000587260 KDM4FA0A1W2PPD8 638 aa21.84■■□□□ 1.09
NFIX-208ENST00000587260 PLPPR3Q6T4P5 718 aa21.84■■□□□ 1.09
NFIX-208ENST00000587260 ZEB1P37275 1124 aaPredicted RBP21.83■■□□□ 1.09
NFIX-208ENST00000587260 TRPM2O94759 1503 aa21.82■■□□□ 1.08
NFIX-208ENST00000587260 SYNMO15061 1565 aa21.82■■□□□ 1.08
NFIX-208ENST00000587260 ERVK-7P63135 1459 aa21.82■■□□□ 1.08
NFIX-208ENST00000587260 SPATA31D1Q6ZQQ2 1576 aa21.81■■□□□ 1.08
NFIX-208ENST00000587260 UGGT1Q9NYU2 1555 aa21.81■■□□□ 1.08
NFIX-208ENST00000587260 PLA2R1Q13018 1463 aa21.8■■□□□ 1.08
NFIX-208ENST00000587260 CEBPAP49715 358 aaPredicted RBP21.8■■□□□ 1.08
NFIX-208ENST00000587260 CLTCL1P53675 1640 aa21.79■■□□□ 1.08
NFIX-208ENST00000587260 FBXO31Q5XUX0 539 aaPredicted RBP21.79■■□□□ 1.08
NFIX-208ENST00000587260 ANKRD30BQ9BXX2 1392 aa21.78■■□□□ 1.08
NFIX-208ENST00000587260 PTPRMP28827 1452 aa21.78■■□□□ 1.08
NFIX-208ENST00000587260 PTPRTO14522 1441 aa21.78■■□□□ 1.08
NFIX-208ENST00000587260 NOS1P29475 1434 aa21.78■■□□□ 1.08
NFIX-208ENST00000587260 PIK3C2BO00750 1634 aa21.75■■□□□ 1.07
NFIX-208ENST00000587260 CCDC144AA2RUR9 1427 aa21.74■■□□□ 1.07
NFIX-208ENST00000587260 MYO3AQ8NEV4 1616 aa21.73■■□□□ 1.07
NFIX-208ENST00000587260 KIF1BO60333 1816 aa21.72■■□□□ 1.07
NFIX-208ENST00000587260 SIN3AQ96ST3 1273 aa21.71■■□□□ 1.07
NFIX-208ENST00000587260 TNRQ92752 1358 aa21.71■■□□□ 1.07
NFIX-208ENST00000587260 MYO5BQ9ULV0 1848 aa21.68■■□□□ 1.06
NFIX-208ENST00000587260 NEUROD1Q13562 356 aa21.68■■□□□ 1.06
NFIX-208ENST00000587260 TIMELESSQ9UNS1 1208 aa21.66■■□□□ 1.06
NFIX-208ENST00000587260 ADGRB3O60242 1522 aa21.64■■□□□ 1.05
NFIX-208ENST00000587260 ZNF142P52746 1687 aaPredicted RBP21.63■■□□□ 1.05
NFIX-208ENST00000587260 UBR1Q8IWV7 1749 aa21.63■■□□□ 1.05
NFIX-208ENST00000587260 TMEM131LA2VDJ0 1609 aa21.63■■□□□ 1.05
NFIX-208ENST00000587260 NLRP1Q9C000 1473 aa21.62■■□□□ 1.05
NFIX-208ENST00000587260 IDI1Q13907 227 aa21.62■■□□□ 1.05
NFIX-208ENST00000587260 CEP170BQ9Y4F5 1589 aaPredicted RBP21.62■■□□□ 1.05
NFIX-208ENST00000587260 CHGAP10645 457 aaKnown RBP21.61■■□□□ 1.05
NFIX-208ENST00000587260 SLC52A1Q9NWF4 448 aa21.61■■□□□ 1.05
NFIX-208ENST00000587260 SPATA31E1Q6ZUB1 1445 aa21.59■■□□□ 1.05
NFIX-208ENST00000587260 KDM5AP29375 1690 aaKnown RBP21.59■■□□□ 1.05
NFIX-208ENST00000587260 SETD1BQ9UPS6 1966 aaKnown RBP21.58■■□□□ 1.04
NFIX-208ENST00000587260 TONSLQ96HA7 1378 aa21.57■■□□□ 1.04
NFIX-208ENST00000587260 IFT172Q9UG01 1749 aa21.57■■□□□ 1.04
NFIX-208ENST00000587260 A2ML1A8K2U0 1454 aa21.57■■□□□ 1.04
NFIX-208ENST00000587260 NEURL4Q96JN8 1562 aa21.56■■□□□ 1.04
NFIX-208ENST00000587260 STAG3Q9UJ98 1225 aa21.55■■□□□ 1.04
NFIX-208ENST00000587260 UHRF1BP1Q6BDS2 1440 aa21.55■■□□□ 1.04
NFIX-208ENST00000587260 RGL3Q3MIN7 710 aa21.55■■□□□ 1.04
NFIX-208ENST00000587260 PPLO60437 1756 aa21.54■■□□□ 1.04
NFIX-208ENST00000587260 ZNF326Q5BKZ1 582 aaKnown RBP21.52■■□□□ 1.04
NFIX-208ENST00000587260 NEXMIFQ5QGS0 1516 aa21.52■■□□□ 1.03
NFIX-208ENST00000587260 L3MBTL2Q969R5 705 aa21.48■■□□□ 1.03
NFIX-208ENST00000587260 PPP1R15AO75807 674 aaPredicted RBP21.46■■□□□ 1.03
NFIX-208ENST00000587260 DCAF11Q8TEB1 546 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms