RNA–Protein interactions for RNA: ENST00000587072.1

GCDH-205, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 453 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-205ENST00000587072 CNTLNQ9NXG0 1405 aa24.77■■□□□ 1.56
GCDH-205ENST00000587072 FAM135AQ9P2D6 1515 aa24.76■■□□□ 1.55
GCDH-205ENST00000587072 PPP6R1Q9UPN7 881 aa24.76■■□□□ 1.55
GCDH-205ENST00000587072 ANKRD50Q9ULJ7 1429 aa24.76■■□□□ 1.55
GCDH-205ENST00000587072 PTPRMP28827 1452 aa24.74■■□□□ 1.55
GCDH-205ENST00000587072 KDM5DQ9BY66 1539 aa24.71■■□□□ 1.55
GCDH-205ENST00000587072 MROH2AA6NES4 1674 aa24.7■■□□□ 1.54
GCDH-205ENST00000587072 DEPDC5O75140 1603 aa24.7■■□□□ 1.54
GCDH-205ENST00000587072 PRDM15P57071 1507 aaPredicted RBP24.7■■□□□ 1.54
GCDH-205ENST00000587072 CLTCQ00610 1675 aaKnown RBP24.69■■□□□ 1.54
GCDH-205ENST00000587072 MROH1Q8NDA8 1641 aa24.69■■□□□ 1.54
GCDH-205ENST00000587072 GCC2Q8IWJ2 1684 aa24.69■■□□□ 1.54
GCDH-205ENST00000587072 ZC3H13Q5T200 1668 aaKnown RBP24.68■■□□□ 1.54
GCDH-205ENST00000587072 HFM1A2PYH4 1435 aa24.68■■□□□ 1.54
GCDH-205ENST00000587072 WASHC2CQ9Y4E1 1318 aa24.65■■□□□ 1.54
GCDH-205ENST00000587072 NAIPQ13075 1403 aa24.65■■□□□ 1.54
GCDH-205ENST00000587072 KANK1Q14678 1352 aa24.65■■□□□ 1.54
GCDH-205ENST00000587072 ABCC3O15438 1527 aa24.63■■□□□ 1.53
GCDH-205ENST00000587072 C3P01024 1663 aa24.62■■□□□ 1.53
GCDH-205ENST00000587072 UNC13BO14795 1591 aa24.62■■□□□ 1.53
GCDH-205ENST00000587072 ZMYM3Q14202 1370 aa24.61■■□□□ 1.53
GCDH-205ENST00000587072 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.6■■□□□ 1.53
GCDH-205ENST00000587072 CEP152O94986 1710 aa24.59■■□□□ 1.53
GCDH-205ENST00000587072 VWDEQ8N2E2 1590 aa24.59■■□□□ 1.53
GCDH-205ENST00000587072 PLPPR3Q6T4P5 718 aa24.58■■□□□ 1.53
GCDH-205ENST00000587072 LMTK2Q8IWU2 1503 aa24.56■■□□□ 1.52
GCDH-205ENST00000587072 CEBPAP49715 358 aaPredicted RBP24.56■■□□□ 1.52
GCDH-205ENST00000587072 CAMSAP1Q5T5Y3 1602 aa24.56■■□□□ 1.52
GCDH-205ENST00000587072 PZPP20742 1482 aa24.54■■□□□ 1.52
GCDH-205ENST00000587072 NPATQ14207 1427 aa24.53■■□□□ 1.52
GCDH-205ENST00000587072 SETD1BQ9UPS6 1966 aaKnown RBP24.53■■□□□ 1.52
GCDH-205ENST00000587072 IQGAP3Q86VI3 1631 aa24.51■■□□□ 1.51
GCDH-205ENST00000587072 NUP155O75694 1391 aa24.5■■□□□ 1.51
GCDH-205ENST00000587072 ARHGAP31Q2M1Z3 1444 aa24.5■■□□□ 1.51
GCDH-205ENST00000587072 SETD5Q9C0A6 1442 aa24.49■■□□□ 1.51
GCDH-205ENST00000587072 EFCAB6Q5THR3 1501 aa24.49■■□□□ 1.51
GCDH-205ENST00000587072 TET3O43151 1660 aa24.49■■□□□ 1.51
GCDH-205ENST00000587072 PREX1Q8TCU6 1659 aa24.47■■□□□ 1.51
GCDH-205ENST00000587072 ACIN1Q9UKV3 1341 aaKnown RBP24.47■■□□□ 1.51
GCDH-205ENST00000587072 ERVK-7P63135 1459 aa24.43■■□□□ 1.5
GCDH-205ENST00000587072 RPRD2Q5VT52 1461 aaKnown RBP24.43■■□□□ 1.5
GCDH-205ENST00000587072 UHRF1BP1Q6BDS2 1440 aa24.43■■□□□ 1.5
GCDH-205ENST00000587072 SPATA31D1Q6ZQQ2 1576 aa24.42■■□□□ 1.5
GCDH-205ENST00000587072 TRIM26Q12899 539 aaPredicted RBP24.42■■□□□ 1.5
GCDH-205ENST00000587072 TRIM52Q96A61 297 aa24.42■■□□□ 1.5
GCDH-205ENST00000587072 TNRQ92752 1358 aa24.42■■□□□ 1.5
GCDH-205ENST00000587072 FBXO31Q5XUX0 539 aaPredicted RBP24.41■■□□□ 1.5
GCDH-205ENST00000587072 CFAP65Q6ZU64 1925 aaKnown RBP24.41■■□□□ 1.5
GCDH-205ENST00000587072 RAB3GAP2Q9H2M9 1393 aa24.4■■□□□ 1.5
GCDH-205ENST00000587072 MYO3AQ8NEV4 1616 aa24.39■■□□□ 1.5
GCDH-205ENST00000587072 LMTK3Q96Q04 1460 aa24.38■■□□□ 1.49
GCDH-205ENST00000587072 E9PCH4 1651 aa24.37■■□□□ 1.49
GCDH-205ENST00000587072 ZNF142P52746 1687 aaPredicted RBP24.35■■□□□ 1.49
GCDH-205ENST00000587072 NLRP1Q9C000 1473 aa24.35■■□□□ 1.49
GCDH-205ENST00000587072 CEP170BQ9Y4F5 1589 aaPredicted RBP24.33■■□□□ 1.49
GCDH-205ENST00000587072 HRCP23327 699 aa24.33■■□□□ 1.49
GCDH-205ENST00000587072 NOS1P29475 1434 aa24.33■■□□□ 1.49
GCDH-205ENST00000587072 A2ML1A8K2U0 1454 aa24.32■■□□□ 1.48
GCDH-205ENST00000587072 SLC4A1APQ9BWU0 796 aaKnown RBP24.31■■□□□ 1.48
GCDH-205ENST00000587072 SYNMO15061 1565 aa24.29■■□□□ 1.48
GCDH-205ENST00000587072 PKD2Q13563 968 aa24.26■■□□□ 1.47
GCDH-205ENST00000587072 SPHKAPQ2M3C7 1700 aa24.26■■□□□ 1.47
GCDH-205ENST00000587072 MPHOSPH9Q99550 1183 aa24.24■■□□□ 1.47
GCDH-205ENST00000587072 SLC52A1Q9NWF4 448 aa24.24■■□□□ 1.47
GCDH-205ENST00000587072 UGGT1Q9NYU2 1555 aa24.24■■□□□ 1.47
GCDH-205ENST00000587072 PTPRTO14522 1441 aa24.23■■□□□ 1.47
GCDH-205ENST00000587072 HSPA2P54652 639 aa24.22■■□□□ 1.47
GCDH-205ENST00000587072 PIK3C2BO00750 1634 aa24.21■■□□□ 1.47
GCDH-205ENST00000587072 TRPM2O94759 1503 aa24.2■■□□□ 1.47
GCDH-205ENST00000587072 KDM5AP29375 1690 aaKnown RBP24.2■■□□□ 1.46
GCDH-205ENST00000587072 UBR1Q8IWV7 1749 aa24.19■■□□□ 1.46
GCDH-205ENST00000587072 IDI1Q13907 227 aa24.18■■□□□ 1.46
GCDH-205ENST00000587072 THEMISQ8N1K5 641 aaPredicted RBP24.18■■□□□ 1.46
GCDH-205ENST00000587072 PLA2R1Q13018 1463 aa24.18■■□□□ 1.46
GCDH-205ENST00000587072 ADGRB3O60242 1522 aa24.17■■□□□ 1.46
GCDH-205ENST00000587072 STAG3Q9UJ98 1225 aa24.17■■□□□ 1.46
GCDH-205ENST00000587072 FOXD1Q16676 465 aa24.13■■□□□ 1.45
GCDH-205ENST00000587072 CLTCL1P53675 1640 aa24.11■■□□□ 1.45
GCDH-205ENST00000587072 TMEM131LA2VDJ0 1609 aa24.1■■□□□ 1.45
GCDH-205ENST00000587072 STRCQ7RTU9 1775 aa24.09■■□□□ 1.45
GCDH-205ENST00000587072 POLR1AO95602 1720 aaPredicted RBP24.08■■□□□ 1.45
GCDH-205ENST00000587072 SLIT1O75093 1534 aa24.08■■□□□ 1.45
GCDH-205ENST00000587072 CCDC144AA2RUR9 1427 aa24.08■■□□□ 1.44
GCDH-205ENST00000587072 CHGAP10645 457 aaKnown RBP24.07■■□□□ 1.44
GCDH-205ENST00000587072 PCGF6Q9BYE7 350 aa24.07■■□□□ 1.44
GCDH-205ENST00000587072 KIF1BO60333 1816 aa24.07■■□□□ 1.44
GCDH-205ENST00000587072 ARHGAP23Q9P227 1491 aa24.07■■□□□ 1.44
GCDH-205ENST00000587072 TMEM2Q9UHN6 1383 aa24.06■■□□□ 1.44
GCDH-205ENST00000587072 MYO5BQ9ULV0 1848 aa24.06■■□□□ 1.44
GCDH-205ENST00000587072 ANKLE2Q86XL3 938 aa24.06■■□□□ 1.44
GCDH-205ENST00000587072 DMRT2Q9Y5R5 561 aa24.04■■□□□ 1.44
GCDH-205ENST00000587072 EID1Q9Y6B2 187 aa24.03■■□□□ 1.44
GCDH-205ENST00000587072 SCAF11Q99590 1463 aaKnown RBP24.02■■□□□ 1.44
GCDH-205ENST00000587072 NCKAP5LQ9HCH0 1330 aa24.02■■□□□ 1.44
GCDH-205ENST00000587072 ANKRD30BQ9BXX2 1392 aa24.01■■□□□ 1.43
GCDH-205ENST00000587072 NEURL4Q96JN8 1562 aa24■■□□□ 1.43
GCDH-205ENST00000587072 HDGFP51858 240 aaKnown RBP23.99■■□□□ 1.43
GCDH-205ENST00000587072 RIMS2Q9UQ26 1411 aa23.99■■□□□ 1.43
GCDH-205ENST00000587072 MED14O60244 1454 aa23.99■■□□□ 1.43
GCDH-205ENST00000587072 TXNDC2Q86VQ3 553 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms