RNA–Protein interactions for RNA: ENST00000586993.5

DDX39A-205, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-205ENST00000586993 ZMYM3Q14202 1370 aa34.4■■■■□ 3.1
DDX39A-205ENST00000586993 SETD1BQ9UPS6 1966 aaKnown RBP34.38■■■■□ 3.09
DDX39A-205ENST00000586993 PPP6R1Q9UPN7 881 aa34.38■■■■□ 3.09
DDX39A-205ENST00000586993 CHIC2Q9UKJ5 165 aa34.37■■■■□ 3.09
DDX39A-205ENST00000586993 RRP7BPQ9NSQ0 103 aa34.36■■■■□ 3.09
DDX39A-205ENST00000586993 KDM5DQ9BY66 1539 aa34.35■■■■□ 3.09
DDX39A-205ENST00000586993 MROH1Q8NDA8 1641 aa34.35■■■■□ 3.09
DDX39A-205ENST00000586993 FAM135AQ9P2D6 1515 aa34.33■■■■□ 3.09
DDX39A-205ENST00000586993 ADGRL2O95490 1459 aa34.33■■■■□ 3.09
DDX39A-205ENST00000586993 PTPRKQ15262 1439 aa34.31■■■■□ 3.08
DDX39A-205ENST00000586993 NCOA1Q15788 1441 aa34.31■■■■□ 3.08
DDX39A-205ENST00000586993 FBXO41Q8TF61 875 aa34.31■■■■□ 3.08
DDX39A-205ENST00000586993 ANKRD30AQ9BXX3 1397 aa34.31■■■■□ 3.08
DDX39A-205ENST00000586993 NPATQ14207 1427 aa34.3■■■■□ 3.08
DDX39A-205ENST00000586993 ERBINQ96RT1 1412 aa34.3■■■■□ 3.08
DDX39A-205ENST00000586993 UHRF1BP1Q6BDS2 1440 aa34.29■■■■□ 3.08
DDX39A-205ENST00000586993 ABCC3O15438 1527 aa34.25■■■■□ 3.07
DDX39A-205ENST00000586993 WASHC2CQ9Y4E1 1318 aa34.25■■■■□ 3.07
DDX39A-205ENST00000586993 ZC3H13Q5T200 1668 aaKnown RBP34.22■■■■□ 3.07
DDX39A-205ENST00000586993 PRDM15P57071 1507 aaPredicted RBP34.22■■■■□ 3.07
DDX39A-205ENST00000586993 DEPDC5O75140 1603 aa34.22■■■■□ 3.07
DDX39A-205ENST00000586993 CEP152O94986 1710 aa34.21■■■■□ 3.07
DDX39A-205ENST00000586993 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.2■■■■□ 3.074e-9■□□□□ 10.2
DDX39A-205ENST00000586993 PZPP20742 1482 aa34.2■■■■□ 3.06
DDX39A-205ENST00000586993 MYO3AQ8NEV4 1616 aa34.19■■■■□ 3.06
DDX39A-205ENST00000586993 RRBP1Q9P2E9 1410 aaKnown RBP34.18■■■■□ 3.06
DDX39A-205ENST00000586993 FBXO31Q5XUX0 539 aaPredicted RBP34.15■■■■□ 3.06
DDX39A-205ENST00000586993 CAMSAP1Q5T5Y3 1602 aa34.14■■■■□ 3.06
DDX39A-205ENST00000586993 ZNF142P52746 1687 aaPredicted RBP34.13■■■■□ 3.05
DDX39A-205ENST00000586993 ROCK1Q13464 1354 aa34.11■■■■□ 3.05
DDX39A-205ENST00000586993 ITGAEP38570 1179 aa34.1■■■■□ 3.05
DDX39A-205ENST00000586993 ANKRD50Q9ULJ7 1429 aa34.1■■■■□ 3.05
DDX39A-205ENST00000586993 STRCQ7RTU9 1775 aa34.1■■■■□ 3.05
DDX39A-205ENST00000586993 CEP170BQ9Y4F5 1589 aaPredicted RBP34.09■■■■□ 3.05
DDX39A-205ENST00000586993 VWDEQ8N2E2 1590 aa34.08■■■■□ 3.05
DDX39A-205ENST00000586993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.07■■■■□ 3.048e-8■■■□□ 17.9
DDX39A-205ENST00000586993 TNRQ92752 1358 aa34.07■■■■□ 3.04
DDX39A-205ENST00000586993 DMRT2Q9Y5R5 561 aa34.03■■■■□ 3.04
DDX39A-205ENST00000586993 CFAP65Q6ZU64 1925 aaKnown RBP34.02■■■■□ 3.04
DDX39A-205ENST00000586993 SPATA31D1Q6ZQQ2 1576 aa34.02■■■■□ 3.04
DDX39A-205ENST00000586993 ERVK-7P63135 1459 aa34.01■■■■□ 3.04
DDX39A-205ENST00000586993 CERKQ8TCT0 537 aa34.01■■■■□ 3.03
DDX39A-205ENST00000586993 A2ML1A8K2U0 1454 aa34.01■■■■□ 3.03
DDX39A-205ENST00000586993 LMTK2Q8IWU2 1503 aa33.99■■■■□ 3.03
DDX39A-205ENST00000586993 KANK1Q14678 1352 aa33.99■■■■□ 3.03
DDX39A-205ENST00000586993 ARHGAP31Q2M1Z3 1444 aa33.97■■■■□ 3.03
DDX39A-205ENST00000586993 UNC13BO14795 1591 aa33.97■■■■□ 3.03
DDX39A-205ENST00000586993 NLRP1Q9C000 1473 aa33.92■■■■□ 3.02
DDX39A-205ENST00000586993 EFCAB6Q5THR3 1501 aa33.92■■■■□ 3.02
DDX39A-205ENST00000586993 PLA2R1Q13018 1463 aa33.88■■■■□ 3.01
DDX39A-205ENST00000586993 PTPRTO14522 1441 aa33.87■■■■□ 3.01
DDX39A-205ENST00000586993 TET3O43151 1660 aa33.85■■■■□ 3.01
DDX39A-205ENST00000586993 GCC2Q8IWJ2 1684 aa33.84■■■■□ 3.01
DDX39A-205ENST00000586993 UGGT1Q9NYU2 1555 aa33.83■■■■□ 3.01
DDX39A-205ENST00000586993 IQGAP3Q86VI3 1631 aa33.82■■■■□ 3.01
DDX39A-205ENST00000586993 NCKAP5LQ9HCH0 1330 aa33.82■■■■□ 3.01
DDX39A-205ENST00000586993 NAIPQ13075 1403 aa33.81■■■■□ 3
DDX39A-205ENST00000586993 SYNMO15061 1565 aa33.8■■■■□ 3
DDX39A-205ENST00000586993 UBR1Q8IWV7 1749 aa33.77■■■■□ 3
DDX39A-205ENST00000586993 NOS1P29475 1434 aa33.77■■■■□ 3
DDX39A-205ENST00000586993 POLR1AO95602 1720 aaPredicted RBP33.76■■■■□ 3
DDX39A-205ENST00000586993 RPRD2Q5VT52 1461 aaKnown RBP33.75■■■□□ 2.99
DDX39A-205ENST00000586993 E9PCH4 1651 aa33.74■■■□□ 2.99
DDX39A-205ENST00000586993 NEURL4Q96JN8 1562 aa33.74■■■□□ 2.99
DDX39A-205ENST00000586993 HFM1A2PYH4 1435 aa33.74■■■□□ 2.99
DDX39A-205ENST00000586993 PIK3C2BO00750 1634 aa33.74■■■□□ 2.99
DDX39A-205ENST00000586993 NUP155O75694 1391 aa33.73■■■□□ 2.99
DDX39A-205ENST00000586993 PKD2Q13563 968 aa33.73■■■□□ 2.99
DDX39A-205ENST00000586993 THEMISQ8N1K5 641 aaPredicted RBP33.71■■■□□ 2.99
DDX39A-205ENST00000586993 LTBP4Q8N2S1 1624 aa33.65■■■□□ 2.98
DDX39A-205ENST00000586993 IDI1Q13907 227 aa33.64■■■□□ 2.98
DDX39A-205ENST00000586993 KDM5AP29375 1690 aaKnown RBP33.61■■■□□ 2.97
DDX39A-205ENST00000586993 ANKLE2Q86XL3 938 aa33.61■■■□□ 2.97
DDX39A-205ENST00000586993 ARHGAP23Q9P227 1491 aa33.6■■■□□ 2.97
DDX39A-205ENST00000586993 SLIT1O75093 1534 aa33.59■■■□□ 2.97
DDX39A-205ENST00000586993 ADGRB3O60242 1522 aa33.58■■■□□ 2.97
DDX39A-205ENST00000586993 MED14O60244 1454 aa33.58■■■□□ 2.97
DDX39A-205ENST00000586993 NPHP4O75161 1426 aaPredicted RBP33.55■■■□□ 2.96
DDX39A-205ENST00000586993 SLC52A1Q9NWF4 448 aa33.55■■■□□ 2.96
DDX39A-205ENST00000586993 IQGAP1P46940 1657 aa33.54■■■□□ 2.96
DDX39A-205ENST00000586993 MYO5BQ9ULV0 1848 aa33.53■■■□□ 2.96
DDX39A-205ENST00000586993 SCAF11Q99590 1463 aaKnown RBP33.53■■■□□ 2.96
DDX39A-205ENST00000586993 ZNF335Q9H4Z2 1342 aaPredicted RBP33.53■■■□□ 2.96
DDX39A-205ENST00000586993 IQSEC2Q5JU85 1478 aa33.52■■■□□ 2.96
DDX39A-205ENST00000586993 TMEM2Q9UHN6 1383 aa33.52■■■□□ 2.96
DDX39A-205ENST00000586993 LTKP29376 864 aa33.51■■■□□ 2.95
DDX39A-205ENST00000586993 STAG3Q9UJ98 1225 aa33.51■■■□□ 2.95
DDX39A-205ENST00000586993 SPHKAPQ2M3C7 1700 aa33.5■■■□□ 2.95
DDX39A-205ENST00000586993 TMEM131LA2VDJ0 1609 aa33.49■■■□□ 2.95
DDX39A-205ENST00000586993 TRIM52Q96A61 297 aa33.46■■■□□ 2.95
DDX39A-205ENST00000586993 TXNDC2Q86VQ3 553 aa33.45■■■□□ 2.95
DDX39A-205ENST00000586993 EID1Q9Y6B2 187 aa33.39■■■□□ 2.94
DDX39A-205ENST00000586993 ZFYVE9O95405 1425 aa33.38■■■□□ 2.93
DDX39A-205ENST00000586993 TRPM2O94759 1503 aa33.38■■■□□ 2.93
DDX39A-205ENST00000586993 SETD5Q9C0A6 1442 aa33.36■■■□□ 2.93
DDX39A-205ENST00000586993 CLTCL1P53675 1640 aa33.36■■■□□ 2.93
DDX39A-205ENST00000586993 SLC4A1APQ9BWU0 796 aaKnown RBP33.35■■■□□ 2.93
DDX39A-205ENST00000586993 STRCP1A6NGW2 1772 aa33.34■■■□□ 2.93
DDX39A-205ENST00000586993 CHGAP10645 457 aaKnown RBP33.34■■■□□ 2.93
DDX39A-205ENST00000586993 RIMS2Q9UQ26 1411 aa33.33■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms