RNA–Protein interactions for RNA: ENST00000586002.3

PCSK4-203, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 3

Gene PCSK4, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-203ENST00000586002 PTPRMP28827 1452 aa26.31■■□□□ 1.8
PCSK4-203ENST00000586002 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.3■■□□□ 1.8
PCSK4-203ENST00000586002 EIF2AK4Q9P2K8 1649 aaKnown RBP26.28■■□□□ 1.8
PCSK4-203ENST00000586002 PLPPR3Q6T4P5 718 aa26.28■■□□□ 1.8
PCSK4-203ENST00000586002 CEBPAP49715 358 aaPredicted RBP26.27■■□□□ 1.8
PCSK4-203ENST00000586002 FER1L4A9Z1Z3 1794 aa26.26■■□□□ 1.79
PCSK4-203ENST00000586002 ZMYM3Q14202 1370 aa26.26■■□□□ 1.79
PCSK4-203ENST00000586002 RIMS1Q86UR5 1692 aaKnown RBP26.25■■□□□ 1.79
PCSK4-203ENST00000586002 KANK1Q14678 1352 aa26.23■■□□□ 1.79
PCSK4-203ENST00000586002 NAIPQ13075 1403 aa26.22■■□□□ 1.79
PCSK4-203ENST00000586002 RNF17Q9BXT8 1623 aaKnown RBP26.21■■□□□ 1.79
PCSK4-203ENST00000586002 FAM135AQ9P2D6 1515 aa26.19■■□□□ 1.78
PCSK4-203ENST00000586002 HFM1A2PYH4 1435 aa26.19■■□□□ 1.78
PCSK4-203ENST00000586002 KDM5DQ9BY66 1539 aa26.16■■□□□ 1.78
PCSK4-203ENST00000586002 CLTCQ00610 1675 aaKnown RBP26.15■■□□□ 1.78
PCSK4-203ENST00000586002 MROH1Q8NDA8 1641 aa26.14■■□□□ 1.78
PCSK4-203ENST00000586002 MROH2AA6NES4 1674 aa26.12■■□□□ 1.77
PCSK4-203ENST00000586002 NUP155O75694 1391 aa26.12■■□□□ 1.77
PCSK4-203ENST00000586002 DEPDC5O75140 1603 aa26.12■■□□□ 1.77
PCSK4-203ENST00000586002 ABCC3O15438 1527 aa26.12■■□□□ 1.77
PCSK4-203ENST00000586002 PRDM15P57071 1507 aaPredicted RBP26.12■■□□□ 1.77
PCSK4-203ENST00000586002 SETD1BQ9UPS6 1966 aaKnown RBP26.11■■□□□ 1.77
PCSK4-203ENST00000586002 FBXO31Q5XUX0 539 aaPredicted RBP26.1■■□□□ 1.77
PCSK4-203ENST00000586002 TRIM52Q96A61 297 aa26.09■■□□□ 1.77
PCSK4-203ENST00000586002 C3P01024 1663 aa26.09■■□□□ 1.77
PCSK4-203ENST00000586002 SETD5Q9C0A6 1442 aa26.08■■□□□ 1.77
PCSK4-203ENST00000586002 ACIN1Q9UKV3 1341 aaKnown RBP26.08■■□□□ 1.77
PCSK4-203ENST00000586002 NPATQ14207 1427 aa26.07■■□□□ 1.76
PCSK4-203ENST00000586002 VWDEQ8N2E2 1590 aa26.07■■□□□ 1.76
PCSK4-203ENST00000586002 TRIM26Q12899 539 aaPredicted RBP26.06■■□□□ 1.76
PCSK4-203ENST00000586002 ARHGAP31Q2M1Z3 1444 aa26.05■■□□□ 1.76
PCSK4-203ENST00000586002 PZPP20742 1482 aa26.05■■□□□ 1.76
PCSK4-203ENST00000586002 LMTK2Q8IWU2 1503 aa26.05■■□□□ 1.76
PCSK4-203ENST00000586002 ZC3H13Q5T200 1668 aaKnown RBP26.05■■□□□ 1.76
PCSK4-203ENST00000586002 GCC2Q8IWJ2 1684 aa26.05■■□□□ 1.76
PCSK4-203ENST00000586002 UNC13BO14795 1591 aa26.03■■□□□ 1.76
PCSK4-203ENST00000586002 CEP152O94986 1710 aa26.01■■□□□ 1.75
PCSK4-203ENST00000586002 HRCP23327 699 aa26■■□□□ 1.75
PCSK4-203ENST00000586002 TNRQ92752 1358 aa25.99■■□□□ 1.75
PCSK4-203ENST00000586002 CAMSAP1Q5T5Y3 1602 aa25.97■■□□□ 1.75
PCSK4-203ENST00000586002 UHRF1BP1Q6BDS2 1440 aa25.96■■□□□ 1.75
PCSK4-203ENST00000586002 RAB3GAP2Q9H2M9 1393 aa25.95■■□□□ 1.75
PCSK4-203ENST00000586002 CFAP65Q6ZU64 1925 aaKnown RBP25.95■■□□□ 1.74
PCSK4-203ENST00000586002 SLC4A1APQ9BWU0 796 aaKnown RBP25.95■■□□□ 1.74
PCSK4-203ENST00000586002 IQGAP3Q86VI3 1631 aa25.94■■□□□ 1.74
PCSK4-203ENST00000586002 ERVK-7P63135 1459 aa25.92■■□□□ 1.74
PCSK4-203ENST00000586002 RPRD2Q5VT52 1461 aaKnown RBP25.91■■□□□ 1.74
PCSK4-203ENST00000586002 TET3O43151 1660 aa25.91■■□□□ 1.74
PCSK4-203ENST00000586002 EFCAB6Q5THR3 1501 aa25.91■■□□□ 1.74
PCSK4-203ENST00000586002 PKD2Q13563 968 aa25.9■■□□□ 1.74
PCSK4-203ENST00000586002 MPHOSPH9Q99550 1183 aa25.9■■□□□ 1.74
PCSK4-203ENST00000586002 LMTK3Q96Q04 1460 aa25.9■■□□□ 1.74
PCSK4-203ENST00000586002 SPATA31D1Q6ZQQ2 1576 aa25.9■■□□□ 1.74
PCSK4-203ENST00000586002 HSPA2P54652 639 aa25.89■■□□□ 1.74
PCSK4-203ENST00000586002 PREX1Q8TCU6 1659 aa25.88■■□□□ 1.73
PCSK4-203ENST00000586002 SLC52A1Q9NWF4 448 aa25.88■■□□□ 1.73
PCSK4-203ENST00000586002 NOS1P29475 1434 aa25.88■■□□□ 1.73
PCSK4-203ENST00000586002 NLRP1Q9C000 1473 aa25.86■■□□□ 1.73
PCSK4-203ENST00000586002 IDI1Q13907 227 aa25.86■■□□□ 1.73
PCSK4-203ENST00000586002 THEMISQ8N1K5 641 aaPredicted RBP25.85■■□□□ 1.73
PCSK4-203ENST00000586002 A2ML1A8K2U0 1454 aa25.84■■□□□ 1.73
PCSK4-203ENST00000586002 E9PCH4 1651 aa25.81■■□□□ 1.72
PCSK4-203ENST00000586002 STAG3Q9UJ98 1225 aa25.81■■□□□ 1.72
PCSK4-203ENST00000586002 MYO3AQ8NEV4 1616 aa25.78■■□□□ 1.72
PCSK4-203ENST00000586002 PTPRTO14522 1441 aa25.78■■□□□ 1.72
PCSK4-203ENST00000586002 CEP170BQ9Y4F5 1589 aaPredicted RBP25.78■■□□□ 1.72
PCSK4-203ENST00000586002 FOXD1Q16676 465 aa25.77■■□□□ 1.72
PCSK4-203ENST00000586002 SYNMO15061 1565 aa25.74■■□□□ 1.71
PCSK4-203ENST00000586002 UGGT1Q9NYU2 1555 aa25.73■■□□□ 1.71
PCSK4-203ENST00000586002 ZNF142P52746 1687 aaPredicted RBP25.72■■□□□ 1.71
PCSK4-203ENST00000586002 CHGAP10645 457 aaKnown RBP25.71■■□□□ 1.71
PCSK4-203ENST00000586002 ANKLE2Q86XL3 938 aa25.71■■□□□ 1.71
PCSK4-203ENST00000586002 PCGF6Q9BYE7 350 aa25.7■■□□□ 1.7
PCSK4-203ENST00000586002 DMRT2Q9Y5R5 561 aa25.7■■□□□ 1.7
PCSK4-203ENST00000586002 PLA2R1Q13018 1463 aa25.69■■□□□ 1.7
PCSK4-203ENST00000586002 NCKAP5LQ9HCH0 1330 aa25.68■■□□□ 1.7
PCSK4-203ENST00000586002 HDGFP51858 240 aaKnown RBP25.65■■□□□ 1.7
PCSK4-203ENST00000586002 EID1Q9Y6B2 187 aa25.65■■□□□ 1.7
PCSK4-203ENST00000586002 PIK3C2BO00750 1634 aa25.65■■□□□ 1.7
PCSK4-203ENST00000586002 SPHKAPQ2M3C7 1700 aa25.64■■□□□ 1.7
PCSK4-203ENST00000586002 TXNDC2Q86VQ3 553 aa25.64■■□□□ 1.7
PCSK4-203ENST00000586002 TMEM2Q9UHN6 1383 aa25.63■■□□□ 1.69
PCSK4-203ENST00000586002 TRPM2O94759 1503 aa25.63■■□□□ 1.69
PCSK4-203ENST00000586002 UBR1Q8IWV7 1749 aa25.62■■□□□ 1.69
PCSK4-203ENST00000586002 LTKP29376 864 aa25.6■■□□□ 1.69
PCSK4-203ENST00000586002 KDM5AP29375 1690 aaKnown RBP25.59■■□□□ 1.69
PCSK4-203ENST00000586002 ADGRB3O60242 1522 aa25.58■■□□□ 1.69
PCSK4-203ENST00000586002 ANKRD30BQ9BXX2 1392 aa25.58■■□□□ 1.69
PCSK4-203ENST00000586002 CCDC144AA2RUR9 1427 aa25.58■■□□□ 1.69
PCSK4-203ENST00000586002 ZNF326Q5BKZ1 582 aaKnown RBP25.58■■□□□ 1.69
PCSK4-203ENST00000586002 ARHGAP23Q9P227 1491 aa25.58■■□□□ 1.69
PCSK4-203ENST00000586002 STRCQ7RTU9 1775 aa25.57■■□□□ 1.68
PCSK4-203ENST00000586002 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.57■■□□□ 1.68
PCSK4-203ENST00000586002 SLIT1O75093 1534 aa25.57■■□□□ 1.68
PCSK4-203ENST00000586002 TMEM131LA2VDJ0 1609 aa25.55■■□□□ 1.68
PCSK4-203ENST00000586002 CLTCL1P53675 1640 aa25.54■■□□□ 1.68
PCSK4-203ENST00000586002 RIMS2Q9UQ26 1411 aa25.53■■□□□ 1.68
PCSK4-203ENST00000586002 PPP1R15AO75807 674 aaPredicted RBP25.51■■□□□ 1.67
PCSK4-203ENST00000586002 RPGRIP1LQ68CZ1 1315 aa25.51■■□□□ 1.67
PCSK4-203ENST00000586002 SCAF11Q99590 1463 aaKnown RBP25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms