RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 CEBPAP49715 358 aaPredicted RBP32.5■■■□□ 2.79
RETREG3-202ENST00000585726 EIF2AK4Q9P2K8 1649 aaKnown RBP32.48■■■□□ 2.79
RETREG3-202ENST00000585726 PPP6R1Q9UPN7 881 aa32.47■■■□□ 2.79
RETREG3-202ENST00000585726 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.46■■■□□ 2.79
RETREG3-202ENST00000585726 CNTLNQ9NXG0 1405 aa32.45■■■□□ 2.79
RETREG3-202ENST00000585726 ANKRD50Q9ULJ7 1429 aa32.45■■■□□ 2.79
RETREG3-202ENST00000585726 WASHC2CQ9Y4E1 1318 aa32.45■■■□□ 2.78
RETREG3-202ENST00000585726 CLTCQ00610 1675 aaKnown RBP32.43■■■□□ 2.78
RETREG3-202ENST00000585726 RNF17Q9BXT8 1623 aaKnown RBP32.42■■■□□ 2.78
RETREG3-202ENST00000585726 ZMYM3Q14202 1370 aa32.4■■■□□ 2.78
RETREG3-202ENST00000585726 KDM5DQ9BY66 1539 aa32.37■■■□□ 2.77
RETREG3-202ENST00000585726 MROH1Q8NDA8 1641 aa32.36■■■□□ 2.77
RETREG3-202ENST00000585726 C3P01024 1663 aa32.35■■■□□ 2.77
RETREG3-202ENST00000585726 MROH2AA6NES4 1674 aa32.33■■■□□ 2.77
RETREG3-202ENST00000585726 KANK1Q14678 1352 aa32.32■■■□□ 2.77
RETREG3-202ENST00000585726 PRDM15P57071 1507 aaPredicted RBP32.31■■■□□ 2.76
RETREG3-202ENST00000585726 ABCC3O15438 1527 aa32.3■■■□□ 2.76
RETREG3-202ENST00000585726 FAM135AQ9P2D6 1515 aa32.3■■■□□ 2.76
RETREG3-202ENST00000585726 DEPDC5O75140 1603 aa32.29■■■□□ 2.76
RETREG3-202ENST00000585726 NAIPQ13075 1403 aa32.29■■■□□ 2.76
RETREG3-202ENST00000585726 CEP152O94986 1710 aa32.26■■■□□ 2.76
RETREG3-202ENST00000585726 HFM1A2PYH4 1435 aa32.25■■■□□ 2.75
RETREG3-202ENST00000585726 ZC3H13Q5T200 1668 aaKnown RBP32.24■■■□□ 2.75
RETREG3-202ENST00000585726 FBXO31Q5XUX0 539 aaPredicted RBP32.23■■■□□ 2.75
RETREG3-202ENST00000585726 GCC2Q8IWJ2 1684 aa32.21■■■□□ 2.75
RETREG3-202ENST00000585726 PZPP20742 1482 aa32.19■■■□□ 2.74
RETREG3-202ENST00000585726 CAMSAP1Q5T5Y3 1602 aa32.18■■■□□ 2.74
RETREG3-202ENST00000585726 UNC13BO14795 1591 aa32.18■■■□□ 2.74
RETREG3-202ENST00000585726 VWDEQ8N2E2 1590 aa32.18■■■□□ 2.74
RETREG3-202ENST00000585726 NUP155O75694 1391 aa32.18■■■□□ 2.74
RETREG3-202ENST00000585726 NPATQ14207 1427 aa32.17■■■□□ 2.74
RETREG3-202ENST00000585726 LMTK2Q8IWU2 1503 aa32.13■■■□□ 2.73
RETREG3-202ENST00000585726 TRIM52Q96A61 297 aa32.13■■■□□ 2.73
RETREG3-202ENST00000585726 UHRF1BP1Q6BDS2 1440 aa32.12■■■□□ 2.73
RETREG3-202ENST00000585726 LMTK3Q96Q04 1460 aa32.11■■■□□ 2.73
RETREG3-202ENST00000585726 TNRQ92752 1358 aa32.1■■■□□ 2.73
RETREG3-202ENST00000585726 PREX1Q8TCU6 1659 aa32.1■■■□□ 2.73
RETREG3-202ENST00000585726 HSPA2P54652 639 aa32.09■■■□□ 2.73
RETREG3-202ENST00000585726 ARHGAP31Q2M1Z3 1444 aa32.09■■■□□ 2.73
RETREG3-202ENST00000585726 SETD5Q9C0A6 1442 aa32.07■■■□□ 2.72
RETREG3-202ENST00000585726 SETD1BQ9UPS6 1966 aaKnown RBP32.07■■■□□ 2.72
RETREG3-202ENST00000585726 EFCAB6Q5THR3 1501 aa32.05■■■□□ 2.72
RETREG3-202ENST00000585726 ERVK-7P63135 1459 aa32.05■■■□□ 2.72
RETREG3-202ENST00000585726 IQGAP3Q86VI3 1631 aa32.05■■■□□ 2.72
RETREG3-202ENST00000585726 CFAP65Q6ZU64 1925 aaKnown RBP32.04■■■□□ 2.72
RETREG3-202ENST00000585726 TET3O43151 1660 aa32.02■■■□□ 2.72
RETREG3-202ENST00000585726 MYO3AQ8NEV4 1616 aa32.01■■■□□ 2.72
RETREG3-202ENST00000585726 SPATA31D1Q6ZQQ2 1576 aa32.01■■■□□ 2.71
RETREG3-202ENST00000585726 RAB3GAP2Q9H2M9 1393 aa31.97■■■□□ 2.71
RETREG3-202ENST00000585726 CEP170BQ9Y4F5 1589 aaPredicted RBP31.94■■■□□ 2.7
RETREG3-202ENST00000585726 SLC4A1APQ9BWU0 796 aaKnown RBP31.94■■■□□ 2.7
RETREG3-202ENST00000585726 RPRD2Q5VT52 1461 aaKnown RBP31.94■■■□□ 2.7
RETREG3-202ENST00000585726 E9PCH4 1651 aa31.93■■■□□ 2.7
RETREG3-202ENST00000585726 A2ML1A8K2U0 1454 aa31.92■■■□□ 2.7
RETREG3-202ENST00000585726 NLRP1Q9C000 1473 aa31.91■■■□□ 2.7
RETREG3-202ENST00000585726 TRIM26Q12899 539 aaPredicted RBP31.91■■■□□ 2.7
RETREG3-202ENST00000585726 NOS1P29475 1434 aa31.9■■■□□ 2.7
RETREG3-202ENST00000585726 ZNF142P52746 1687 aaPredicted RBP31.89■■■□□ 2.7
RETREG3-202ENST00000585726 PKD2Q13563 968 aa31.88■■■□□ 2.69
RETREG3-202ENST00000585726 SYNMO15061 1565 aa31.86■■■□□ 2.69
RETREG3-202ENST00000585726 IDI1Q13907 227 aa31.85■■■□□ 2.69
RETREG3-202ENST00000585726 MPHOSPH9Q99550 1183 aa31.84■■■□□ 2.69
RETREG3-202ENST00000585726 STAG3Q9UJ98 1225 aa31.84■■■□□ 2.69
RETREG3-202ENST00000585726 UGGT1Q9NYU2 1555 aa31.84■■■□□ 2.69
RETREG3-202ENST00000585726 ACIN1Q9UKV3 1341 aaKnown RBP31.83■■■□□ 2.69
RETREG3-202ENST00000585726 FOXD1Q16676 465 aa31.81■■■□□ 2.68
RETREG3-202ENST00000585726 THEMISQ8N1K5 641 aaPredicted RBP31.81■■■□□ 2.68
RETREG3-202ENST00000585726 SLC52A1Q9NWF4 448 aa31.81■■■□□ 2.68
RETREG3-202ENST00000585726 PIK3C2BO00750 1634 aa31.78■■■□□ 2.68
RETREG3-202ENST00000585726 NCKAP5LQ9HCH0 1330 aa31.76■■■□□ 2.68
RETREG3-202ENST00000585726 CHGAP10645 457 aaKnown RBP31.76■■■□□ 2.67
RETREG3-202ENST00000585726 HRCP23327 699 aa31.76■■■□□ 2.67
RETREG3-202ENST00000585726 SPHKAPQ2M3C7 1700 aa31.73■■■□□ 2.67
RETREG3-202ENST00000585726 UBR1Q8IWV7 1749 aa31.73■■■□□ 2.67
RETREG3-202ENST00000585726 PTPRTO14522 1441 aa31.73■■■□□ 2.67
RETREG3-202ENST00000585726 PLA2R1Q13018 1463 aa31.71■■■□□ 2.67
RETREG3-202ENST00000585726 STRCQ7RTU9 1775 aa31.71■■■□□ 2.67
RETREG3-202ENST00000585726 ANKLE2Q86XL3 938 aa31.68■■■□□ 2.66
RETREG3-202ENST00000585726 ADGRB3O60242 1522 aa31.67■■■□□ 2.66
RETREG3-202ENST00000585726 TRPM2O94759 1503 aa31.65■■■□□ 2.66
RETREG3-202ENST00000585726 DMRT2Q9Y5R5 561 aa31.65■■■□□ 2.66
RETREG3-202ENST00000585726 CLTCL1P53675 1640 aa31.61■■■□□ 2.65
RETREG3-202ENST00000585726 TMEM2Q9UHN6 1383 aa31.61■■■□□ 2.65
RETREG3-202ENST00000585726 TXNDC2Q86VQ3 553 aa31.61■■■□□ 2.65
RETREG3-202ENST00000585726 EID1Q9Y6B2 187 aa31.6■■■□□ 2.65
RETREG3-202ENST00000585726 KDM5AP29375 1690 aaKnown RBP31.6■■■□□ 2.65
RETREG3-202ENST00000585726 TMEM131LA2VDJ0 1609 aa31.6■■■□□ 2.65
RETREG3-202ENST00000585726 LTKP29376 864 aa31.59■■■□□ 2.65
RETREG3-202ENST00000585726 ARHGAP23Q9P227 1491 aa31.58■■■□□ 2.65
RETREG3-202ENST00000585726 SLIT1O75093 1534 aa31.57■■■□□ 2.64
RETREG3-202ENST00000585726 MYO5BQ9ULV0 1848 aa31.56■■■□□ 2.64
RETREG3-202ENST00000585726 ZNF326Q5BKZ1 582 aaKnown RBP31.56■■■□□ 2.64
RETREG3-202ENST00000585726 POLR1AO95602 1720 aaPredicted RBP31.55■■■□□ 2.64
RETREG3-202ENST00000585726 PCGF6Q9BYE7 350 aa31.55■■■□□ 2.64
RETREG3-202ENST00000585726 SCAF11Q99590 1463 aaKnown RBP31.54■■■□□ 2.64
RETREG3-202ENST00000585726 CCDC144AA2RUR9 1427 aa31.54■■■□□ 2.64
RETREG3-202ENST00000585726 NEURL4Q96JN8 1562 aa31.53■■■□□ 2.64
RETREG3-202ENST00000585726 NUTM2DQ5VT03 806 aaPredicted RBP31.53■■■□□ 2.64
RETREG3-202ENST00000585726 SENP3Q9H4L4 574 aaPredicted RBP31.53■■■□□ 2.64
RETREG3-202ENST00000585726 NPHP4O75161 1426 aaPredicted RBP31.52■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms