RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 RAB3GAP2Q9H2M9 1393 aa17.4■□□□□ 0.38
CDRT1-207ENST00000583965 PRDM15P57071 1507 aaPredicted RBP17.4■□□□□ 0.38
CDRT1-207ENST00000583965 MROH1Q8NDA8 1641 aa17.39■□□□□ 0.38
CDRT1-207ENST00000583965 FAM135AQ9P2D6 1515 aa17.39■□□□□ 0.37
CDRT1-207ENST00000583965 KIF3BO15066 747 aa17.39■□□□□ 0.37
CDRT1-207ENST00000583965 ZC3H13Q5T200 1668 aaKnown RBP17.39■□□□□ 0.37
CDRT1-207ENST00000583965 IQGAP3Q86VI3 1631 aa17.37■□□□□ 0.37
CDRT1-207ENST00000583965 KDM5DQ9BY66 1539 aa17.37■□□□□ 0.37
CDRT1-207ENST00000583965 ARID4BQ4LE39 1312 aaPredicted RBP17.36■□□□□ 0.37
CDRT1-207ENST00000583965 VWDEQ8N2E2 1590 aa17.36■□□□□ 0.37
CDRT1-207ENST00000583965 CEP152O94986 1710 aa17.35■□□□□ 0.37
CDRT1-207ENST00000583965 FER1L4A9Z1Z3 1794 aa17.35■□□□□ 0.37
CDRT1-207ENST00000583965 PPP6R1Q9UPN7 881 aa17.35■□□□□ 0.37
CDRT1-207ENST00000583965 KANK1Q14678 1352 aa17.34■□□□□ 0.37
CDRT1-207ENST00000583965 GGT6Q6P531 493 aa17.32■□□□□ 0.36
CDRT1-207ENST00000583965 MROH2AA6NES4 1674 aa17.32■□□□□ 0.36
CDRT1-207ENST00000583965 TET3O43151 1660 aa17.32■□□□□ 0.36
CDRT1-207ENST00000583965 ADAMTSL3P82987 1691 aa17.32■□□□□ 0.36
CDRT1-207ENST00000583965 CLTCQ00610 1675 aaKnown RBP17.31■□□□□ 0.36
CDRT1-207ENST00000583965 LMTK2Q8IWU2 1503 aa17.31■□□□□ 0.36
CDRT1-207ENST00000583965 NUP155O75694 1391 aa17.3■□□□□ 0.36
CDRT1-207ENST00000583965 CAMSAP1Q5T5Y3 1602 aa17.29■□□□□ 0.36
CDRT1-207ENST00000583965 TRIM52Q96A61 297 aa17.29■□□□□ 0.36
CDRT1-207ENST00000583965 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.29■□□□□ 0.36
CDRT1-207ENST00000583965 ABCC3O15438 1527 aa17.29■□□□□ 0.36
CDRT1-207ENST00000583965 CFAP65Q6ZU64 1925 aaKnown RBP17.28■□□□□ 0.36
CDRT1-207ENST00000583965 CNTLNQ9NXG0 1405 aa17.28■□□□□ 0.36
CDRT1-207ENST00000583965 PZPP20742 1482 aa17.27■□□□□ 0.36
CDRT1-207ENST00000583965 MLECQ14165 292 aa17.27■□□□□ 0.36
CDRT1-207ENST00000583965 MADDQ8WXG6 1647 aa17.27■□□□□ 0.36
CDRT1-207ENST00000583965 WASHC2CQ9Y4E1 1318 aa17.26■□□□□ 0.35
CDRT1-207ENST00000583965 EFCAB6Q5THR3 1501 aa17.26■□□□□ 0.35
CDRT1-207ENST00000583965 E9PCH4 1651 aa17.26■□□□□ 0.35
CDRT1-207ENST00000583965 ESF1Q9H501 851 aaKnown RBP17.25■□□□□ 0.35
CDRT1-207ENST00000583965 RIMS1Q86UR5 1692 aaKnown RBP17.25■□□□□ 0.35
CDRT1-207ENST00000583965 SLC4A1APQ9BWU0 796 aaKnown RBP17.22■□□□□ 0.35
CDRT1-207ENST00000583965 RPRD2Q5VT52 1461 aaKnown RBP17.22■□□□□ 0.35
CDRT1-207ENST00000583965 C3P01024 1663 aa17.22■□□□□ 0.35
CDRT1-207ENST00000583965 ARHGAP31Q2M1Z3 1444 aa17.21■□□□□ 0.35
CDRT1-207ENST00000583965 MPHOSPH9Q99550 1183 aa17.21■□□□□ 0.35
CDRT1-207ENST00000583965 SPHKAPQ2M3C7 1700 aa17.21■□□□□ 0.35
CDRT1-207ENST00000583965 PREX1Q8TCU6 1659 aa17.2■□□□□ 0.34
CDRT1-207ENST00000583965 SETD1BQ9UPS6 1966 aaKnown RBP17.18■□□□□ 0.34
CDRT1-207ENST00000583965 DHX57Q6P158 1386 aaKnown RBP17.17■□□□□ 0.34
CDRT1-207ENST00000583965 NPATQ14207 1427 aa17.17■□□□□ 0.34
CDRT1-207ENST00000583965 ZMYM3Q14202 1370 aa17.16■□□□□ 0.34
CDRT1-207ENST00000583965 PKD2Q13563 968 aa17.16■□□□□ 0.34
CDRT1-207ENST00000583965 SPATA31D1Q6ZQQ2 1576 aa17.14■□□□□ 0.33
CDRT1-207ENST00000583965 PTPRTO14522 1441 aa17.12■□□□□ 0.33
CDRT1-207ENST00000583965 PTPRMP28827 1452 aa17.12■□□□□ 0.33
CDRT1-207ENST00000583965 ERVK-7P63135 1459 aa17.12■□□□□ 0.33
CDRT1-207ENST00000583965 TRPM2O94759 1503 aa17.11■□□□□ 0.33
CDRT1-207ENST00000583965 NOS1P29475 1434 aa17.11■□□□□ 0.33
CDRT1-207ENST00000583965 KIF1BO60333 1816 aa17.1■□□□□ 0.33
CDRT1-207ENST00000583965 KDM4FA0A1W2PPD8 638 aa17.09■□□□□ 0.33
CDRT1-207ENST00000583965 SYNMO15061 1565 aa17.09■□□□□ 0.33
CDRT1-207ENST00000583965 PIK3C2BO00750 1634 aa17.09■□□□□ 0.33
CDRT1-207ENST00000583965 CLSPNQ9HAW4 1339 aa17.08■□□□□ 0.32
CDRT1-207ENST00000583965 ANKRD30BQ9BXX2 1392 aa17.07■□□□□ 0.32
CDRT1-207ENST00000583965 FOXD1Q16676 465 aa17.07■□□□□ 0.32
CDRT1-207ENST00000583965 PLA2R1Q13018 1463 aa17.06■□□□□ 0.32
CDRT1-207ENST00000583965 CLTCL1P53675 1640 aa17.06■□□□□ 0.32
CDRT1-207ENST00000583965 KDM5AP29375 1690 aaKnown RBP17.05■□□□□ 0.32
CDRT1-207ENST00000583965 FBXO31Q5XUX0 539 aaPredicted RBP17.05■□□□□ 0.32
CDRT1-207ENST00000583965 TNRQ92752 1358 aa17.04■□□□□ 0.32
CDRT1-207ENST00000583965 MYO3AQ8NEV4 1616 aa17.04■□□□□ 0.32
CDRT1-207ENST00000583965 CEBPAP49715 358 aaPredicted RBP17.04■□□□□ 0.32
CDRT1-207ENST00000583965 CCER1Q8TC90 406 aaPredicted RBP17.04■□□□□ 0.32
CDRT1-207ENST00000583965 MYO5BQ9ULV0 1848 aa17.03■□□□□ 0.32
CDRT1-207ENST00000583965 NLRP1Q9C000 1473 aa17.03■□□□□ 0.32
CDRT1-207ENST00000583965 ZNF142P52746 1687 aaPredicted RBP17.03■□□□□ 0.32
CDRT1-207ENST00000583965 CCDC144AA2RUR9 1427 aa17.03■□□□□ 0.32
CDRT1-207ENST00000583965 SLC52A1Q9NWF4 448 aa17.02■□□□□ 0.32
CDRT1-207ENST00000583965 NEURL4Q96JN8 1562 aa17.01■□□□□ 0.31
CDRT1-207ENST00000583965 UGGT1Q9NYU2 1555 aa17■□□□□ 0.31
CDRT1-207ENST00000583965 UBR1Q8IWV7 1749 aa16.99■□□□□ 0.31
CDRT1-207ENST00000583965 PLPPR3Q6T4P5 718 aa16.98■□□□□ 0.31
CDRT1-207ENST00000583965 TMEM131LA2VDJ0 1609 aa16.98■□□□□ 0.31
CDRT1-207ENST00000583965 ADGRB3O60242 1522 aa16.97■□□□□ 0.31
CDRT1-207ENST00000583965 CEP170BQ9Y4F5 1589 aaPredicted RBP16.97■□□□□ 0.31
CDRT1-207ENST00000583965 IDI1Q13907 227 aa16.96■□□□□ 0.31
CDRT1-207ENST00000583965 A2ML1A8K2U0 1454 aa16.96■□□□□ 0.31
CDRT1-207ENST00000583965 UHRF1BP1Q6BDS2 1440 aa16.95■□□□□ 0.3
CDRT1-207ENST00000583965 IFT172Q9UG01 1749 aa16.93■□□□□ 0.3
CDRT1-207ENST00000583965 PPLO60437 1756 aa16.92■□□□□ 0.3
CDRT1-207ENST00000583965 SIN3AQ96ST3 1273 aa16.92■□□□□ 0.3
CDRT1-207ENST00000583965 SPATA31E1Q6ZUB1 1445 aa16.92■□□□□ 0.3
CDRT1-207ENST00000583965 STAG3Q9UJ98 1225 aa16.9■□□□□ 0.3
CDRT1-207ENST00000583965 NEUROD1Q13562 356 aa16.89■□□□□ 0.29
CDRT1-207ENST00000583965 CHGAP10645 457 aaKnown RBP16.88■□□□□ 0.29
CDRT1-207ENST00000583965 TIMELESSQ9UNS1 1208 aa16.87■□□□□ 0.29
CDRT1-207ENST00000583965 SLIT1O75093 1534 aa16.86■□□□□ 0.29
CDRT1-207ENST00000583965 THEMISQ8N1K5 641 aaPredicted RBP16.86■□□□□ 0.29
CDRT1-207ENST00000583965 POLR1AO95602 1720 aaPredicted RBP16.86■□□□□ 0.29
CDRT1-207ENST00000583965 RPGRIP1LQ68CZ1 1315 aa16.86■□□□□ 0.29
CDRT1-207ENST00000583965 TONSLQ96HA7 1378 aa16.86■□□□□ 0.29
CDRT1-207ENST00000583965 NEXMIFQ5QGS0 1516 aa16.86■□□□□ 0.29
CDRT1-207ENST00000583965 LMTK3Q96Q04 1460 aa16.85■□□□□ 0.29
CDRT1-207ENST00000583965 RGL3Q3MIN7 710 aa16.84■□□□□ 0.29
CDRT1-207ENST00000583965 ZNF326Q5BKZ1 582 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms