RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 UNC13BO14795 1591 aa20.33■□□□□ 0.84
ITGB4-209ENST00000583327 RNF17Q9BXT8 1623 aaKnown RBP20.32■□□□□ 0.84
ITGB4-209ENST00000583327 KDM5DQ9BY66 1539 aa20.32■□□□□ 0.84
ITGB4-209ENST00000583327 MROH1Q8NDA8 1641 aa20.31■□□□□ 0.84
ITGB4-209ENST00000583327 VWDEQ8N2E2 1590 aa20.3■□□□□ 0.84
ITGB4-209ENST00000583327 PPP6R1Q9UPN7 881 aa20.29■□□□□ 0.84
ITGB4-209ENST00000583327 PRDM15P57071 1507 aaPredicted RBP20.28■□□□□ 0.84
ITGB4-209ENST00000583327 NUP155O75694 1391 aa20.28■□□□□ 0.84
ITGB4-209ENST00000583327 PZPP20742 1482 aa20.27■□□□□ 0.84
ITGB4-209ENST00000583327 GGT6Q6P531 493 aa20.25■□□□□ 0.83
ITGB4-209ENST00000583327 TRIM52Q96A61 297 aa20.25■□□□□ 0.83
ITGB4-209ENST00000583327 MPHOSPH9Q99550 1183 aa20.25■□□□□ 0.83
ITGB4-209ENST00000583327 IQGAP3Q86VI3 1631 aa20.24■□□□□ 0.83
ITGB4-209ENST00000583327 DHX57Q6P158 1386 aaKnown RBP20.24■□□□□ 0.83
ITGB4-209ENST00000583327 LMTK2Q8IWU2 1503 aa20.24■□□□□ 0.83
ITGB4-209ENST00000583327 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.23■□□□□ 0.83
ITGB4-209ENST00000583327 FAM135AQ9P2D6 1515 aa20.22■□□□□ 0.83
ITGB4-209ENST00000583327 KANK1Q14678 1352 aa20.21■□□□□ 0.83
ITGB4-209ENST00000583327 SLC4A1APQ9BWU0 796 aaKnown RBP20.19■□□□□ 0.82
ITGB4-209ENST00000583327 ABCC3O15438 1527 aa20.18■□□□□ 0.82
ITGB4-209ENST00000583327 ARID4BQ4LE39 1312 aaPredicted RBP20.18■□□□□ 0.82
ITGB4-209ENST00000583327 WASHC2CQ9Y4E1 1318 aa20.17■□□□□ 0.82
ITGB4-209ENST00000583327 PKD2Q13563 968 aa20.15■□□□□ 0.82
ITGB4-209ENST00000583327 ARHGAP31Q2M1Z3 1444 aa20.15■□□□□ 0.82
ITGB4-209ENST00000583327 TET3O43151 1660 aa20.14■□□□□ 0.81
ITGB4-209ENST00000583327 ZC3H13Q5T200 1668 aaKnown RBP20.14■□□□□ 0.81
ITGB4-209ENST00000583327 MLECQ14165 292 aa20.14■□□□□ 0.81
ITGB4-209ENST00000583327 EFCAB6Q5THR3 1501 aa20.12■□□□□ 0.81
ITGB4-209ENST00000583327 CLSPNQ9HAW4 1339 aa20.11■□□□□ 0.81
ITGB4-209ENST00000583327 CNTLNQ9NXG0 1405 aa20.1■□□□□ 0.81
ITGB4-209ENST00000583327 CEP152O94986 1710 aa20.1■□□□□ 0.81
ITGB4-209ENST00000583327 ADAMTSL3P82987 1691 aa20.1■□□□□ 0.81
ITGB4-209ENST00000583327 RPRD2Q5VT52 1461 aaKnown RBP20.1■□□□□ 0.81
ITGB4-209ENST00000583327 ANKRD30BQ9BXX2 1392 aa20.09■□□□□ 0.81
ITGB4-209ENST00000583327 E9PCH4 1651 aa20.09■□□□□ 0.81
ITGB4-209ENST00000583327 PTPRTO14522 1441 aa20.09■□□□□ 0.81
ITGB4-209ENST00000583327 NPATQ14207 1427 aa20.09■□□□□ 0.81
ITGB4-209ENST00000583327 FOXD1Q16676 465 aa20.08■□□□□ 0.81
ITGB4-209ENST00000583327 CAMSAP1Q5T5Y3 1602 aa20.08■□□□□ 0.8
ITGB4-209ENST00000583327 ZMYM3Q14202 1370 aa20.08■□□□□ 0.8
ITGB4-209ENST00000583327 PLA2R1Q13018 1463 aa20.07■□□□□ 0.8
ITGB4-209ENST00000583327 CLTCQ00610 1675 aaKnown RBP20.07■□□□□ 0.8
ITGB4-209ENST00000583327 MROH2AA6NES4 1674 aa20.06■□□□□ 0.8
ITGB4-209ENST00000583327 CCER1Q8TC90 406 aaPredicted RBP20.05■□□□□ 0.8
ITGB4-209ENST00000583327 NOS1P29475 1434 aa20.04■□□□□ 0.8
ITGB4-209ENST00000583327 ESF1Q9H501 851 aaKnown RBP20.04■□□□□ 0.8
ITGB4-209ENST00000583327 MADDQ8WXG6 1647 aa20.02■□□□□ 0.79
ITGB4-209ENST00000583327 FER1L4A9Z1Z3 1794 aa20.01■□□□□ 0.79
ITGB4-209ENST00000583327 FBXO31Q5XUX0 539 aaPredicted RBP19.99■□□□□ 0.79
ITGB4-209ENST00000583327 SPATA31D1Q6ZQQ2 1576 aa19.99■□□□□ 0.79
ITGB4-209ENST00000583327 KDM4FA0A1W2PPD8 638 aa19.98■□□□□ 0.79
ITGB4-209ENST00000583327 ERVK-7P63135 1459 aa19.98■□□□□ 0.79
ITGB4-209ENST00000583327 TRPM2O94759 1503 aa19.97■□□□□ 0.79
ITGB4-209ENST00000583327 SIN3AQ96ST3 1273 aa19.96■□□□□ 0.79
ITGB4-209ENST00000583327 C3P01024 1663 aa19.96■□□□□ 0.79
ITGB4-209ENST00000583327 PREX1Q8TCU6 1659 aa19.96■□□□□ 0.79
ITGB4-209ENST00000583327 SPHKAPQ2M3C7 1700 aa19.96■□□□□ 0.79
ITGB4-209ENST00000583327 CEBPAP49715 358 aaPredicted RBP19.95■□□□□ 0.78
ITGB4-209ENST00000583327 SYNMO15061 1565 aa19.94■□□□□ 0.78
ITGB4-209ENST00000583327 RIMS1Q86UR5 1692 aaKnown RBP19.94■□□□□ 0.78
ITGB4-209ENST00000583327 SLC52A1Q9NWF4 448 aa19.93■□□□□ 0.78
ITGB4-209ENST00000583327 PTPRMP28827 1452 aa19.92■□□□□ 0.78
ITGB4-209ENST00000583327 PIK3C2BO00750 1634 aa19.91■□□□□ 0.78
ITGB4-209ENST00000583327 IDI1Q13907 227 aa19.9■□□□□ 0.78
ITGB4-209ENST00000583327 CCDC144AA2RUR9 1427 aa19.9■□□□□ 0.78
ITGB4-209ENST00000583327 CLTCL1P53675 1640 aa19.9■□□□□ 0.78
ITGB4-209ENST00000583327 NEURL4Q96JN8 1562 aa19.88■□□□□ 0.77
ITGB4-209ENST00000583327 TNRQ92752 1358 aa19.88■□□□□ 0.77
ITGB4-209ENST00000583327 TIMELESSQ9UNS1 1208 aa19.88■□□□□ 0.77
ITGB4-209ENST00000583327 UGGT1Q9NYU2 1555 aa19.87■□□□□ 0.77
ITGB4-209ENST00000583327 SPATA31E1Q6ZUB1 1445 aa19.87■□□□□ 0.77
ITGB4-209ENST00000583327 CFAP65Q6ZU64 1925 aaKnown RBP19.87■□□□□ 0.77
ITGB4-209ENST00000583327 NEUROD1Q13562 356 aa19.85■□□□□ 0.77
ITGB4-209ENST00000583327 NLRP1Q9C000 1473 aa19.84■□□□□ 0.77
ITGB4-209ENST00000583327 ADGRB3O60242 1522 aa19.8■□□□□ 0.76
ITGB4-209ENST00000583327 TMEM131LA2VDJ0 1609 aa19.8■□□□□ 0.76
ITGB4-209ENST00000583327 KDM5AP29375 1690 aaKnown RBP19.78■□□□□ 0.76
ITGB4-209ENST00000583327 L3MBTL2Q969R5 705 aa19.78■□□□□ 0.76
ITGB4-209ENST00000583327 A2ML1A8K2U0 1454 aa19.78■□□□□ 0.76
ITGB4-209ENST00000583327 SETD1BQ9UPS6 1966 aaKnown RBP19.77■□□□□ 0.76
ITGB4-209ENST00000583327 KIF1BO60333 1816 aa19.76■□□□□ 0.75
ITGB4-209ENST00000583327 ZEB1P37275 1124 aaPredicted RBP19.76■□□□□ 0.75
ITGB4-209ENST00000583327 STAC3Q96MF2 364 aa19.76■□□□□ 0.75
ITGB4-209ENST00000583327 RPGRIP1LQ68CZ1 1315 aa19.76■□□□□ 0.75
ITGB4-209ENST00000583327 TONSLQ96HA7 1378 aa19.75■□□□□ 0.75
ITGB4-209ENST00000583327 PLPPR3Q6T4P5 718 aa19.75■□□□□ 0.75
ITGB4-209ENST00000583327 MYO3AQ8NEV4 1616 aa19.74■□□□□ 0.75
ITGB4-209ENST00000583327 PPP1R15AO75807 674 aaPredicted RBP19.74■□□□□ 0.75
ITGB4-209ENST00000583327 RGL3Q3MIN7 710 aa19.74■□□□□ 0.75
ITGB4-209ENST00000583327 UBR1Q8IWV7 1749 aa19.73■□□□□ 0.75
ITGB4-209ENST00000583327 CHGAP10645 457 aaKnown RBP19.71■□□□□ 0.75
ITGB4-209ENST00000583327 ZNF142P52746 1687 aaPredicted RBP19.71■□□□□ 0.75
ITGB4-209ENST00000583327 CEP170BQ9Y4F5 1589 aaPredicted RBP19.7■□□□□ 0.74
ITGB4-209ENST00000583327 THEMISQ8N1K5 641 aaPredicted RBP19.7■□□□□ 0.74
ITGB4-209ENST00000583327 ZFYVE9O95405 1425 aa19.69■□□□□ 0.74
ITGB4-209ENST00000583327 ARHGAP23Q9P227 1491 aa19.69■□□□□ 0.74
ITGB4-209ENST00000583327 DCAF11Q8TEB1 546 aa19.69■□□□□ 0.74
ITGB4-209ENST00000583327 TMEM2Q9UHN6 1383 aa19.69■□□□□ 0.74
ITGB4-209ENST00000583327 UHRF1BP1Q6BDS2 1440 aa19.68■□□□□ 0.74
ITGB4-209ENST00000583327 SLIT1O75093 1534 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms