RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 SHANK2Q9UPX8 1470 aa28.28■■■□□ 2.12
SNX11-212ENST00000583320 ALKQ9UM73 1620 aa28.28■■■□□ 2.12
SNX11-212ENST00000583320 MBD5Q9P267 1494 aa28.27■■■□□ 2.12
SNX11-212ENST00000583320 TIAM1Q13009 1591 aa28.27■■■□□ 2.12
SNX11-212ENST00000583320 FBXO31Q5XUX0 539 aaPredicted RBP28.26■■■□□ 2.11
SNX11-212ENST00000583320 VWDEQ8N2E2 1590 aa28.25■■■□□ 2.11
SNX11-212ENST00000583320 TNRQ92752 1358 aa28.24■■■□□ 2.11
SNX11-212ENST00000583320 CEP162Q5TB80 1403 aa28.22■■■□□ 2.11
SNX11-212ENST00000583320 TOM1O60784 492 aa28.21■■■□□ 2.11
SNX11-212ENST00000583320 PZPP20742 1482 aa28.21■■■□□ 2.11
SNX11-212ENST00000583320 DHX29Q7Z478 1369 aaKnown RBP28.2■■■□□ 2.1
SNX11-212ENST00000583320 MTUS2Q5JR59 1369 aa28.19■■■□□ 2.1
SNX11-212ENST00000583320 KDM5DQ9BY66 1539 aa28.18■■■□□ 2.1
SNX11-212ENST00000583320 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.18■■■□□ 2.1
SNX11-212ENST00000583320 RTEL1-TNFRSF6BF6WH68 1400 aa28.18■■■□□ 2.1
SNX11-212ENST00000583320 KIF3BO15066 747 aa28.13■■■□□ 2.09
SNX11-212ENST00000583320 STRCP1A6NGW2 1772 aa28.12■■■□□ 2.09
SNX11-212ENST00000583320 EHBP1L1Q8N3D4 1523 aa28.12■■■□□ 2.09
SNX11-212ENST00000583320 FAM135AQ9P2D6 1515 aa28.12■■■□□ 2.09
SNX11-212ENST00000583320 DEPDC5O75140 1603 aa28.11■■■□□ 2.09
SNX11-212ENST00000583320 NPHP4O75161 1426 aaPredicted RBP28.11■■■□□ 2.09
SNX11-212ENST00000583320 MED14O60244 1454 aa28.11■■■□□ 2.09
SNX11-212ENST00000583320 ANKLE2Q86XL3 938 aa28.1■■■□□ 2.09
SNX11-212ENST00000583320 UGGT1Q9NYU2 1555 aa28.1■■■□□ 2.09
SNX11-212ENST00000583320 MIA2Q96PC5 1412 aa28.09■■■□□ 2.09
SNX11-212ENST00000583320 IQGAP1P46940 1657 aa28.08■■■□□ 2.09
SNX11-212ENST00000583320 NLRP1Q9C000 1473 aa28.08■■■□□ 2.09
SNX11-212ENST00000583320 PHF23Q9BUL5 403 aaPredicted RBP28.07■■■□□ 2.08
SNX11-212ENST00000583320 CCDC141Q6ZP82 1450 aa28.07■■■□□ 2.08
SNX11-212ENST00000583320 SENP3Q9H4L4 574 aaPredicted RBP28.06■■■□□ 2.08
SNX11-212ENST00000583320 WASHC2CQ9Y4E1 1318 aa28.05■■■□□ 2.08
SNX11-212ENST00000583320 LRRC7Q96NW7 1537 aa28.04■■■□□ 2.08
SNX11-212ENST00000583320 CAMSAP2Q08AD1 1489 aa28.04■■■□□ 2.08
SNX11-212ENST00000583320 THEMISQ8N1K5 641 aaPredicted RBP28.03■■■□□ 2.08
SNX11-212ENST00000583320 RNF17Q9BXT8 1623 aaKnown RBP28.02■■■□□ 2.08
SNX11-212ENST00000583320 SYNMO15061 1565 aa27.99■■■□□ 2.07
SNX11-212ENST00000583320 ZC3H13Q5T200 1668 aaKnown RBP27.97■■■□□ 2.07
SNX11-212ENST00000583320 ABCC3O15438 1527 aa27.96■■■□□ 2.07
SNX11-212ENST00000583320 NCOA2Q15596 1464 aa27.95■■■□□ 2.07
SNX11-212ENST00000583320 ARHGEF5Q12774 1597 aa27.92■■■□□ 2.06
SNX11-212ENST00000583320 ERVK-7P63135 1459 aa27.91■■■□□ 2.06
SNX11-212ENST00000583320 RGS17Q9UGC6 210 aaPredicted RBP27.91■■■□□ 2.06
SNX11-212ENST00000583320 MROH1Q8NDA8 1641 aa27.89■■■□□ 2.05
SNX11-212ENST00000583320 UBR1Q8IWV7 1749 aa27.88■■■□□ 2.05
SNX11-212ENST00000583320 XIRP1Q702N8 1843 aaKnown RBP27.88■■■□□ 2.05
SNX11-212ENST00000583320 RSPH4AQ5TD94 716 aa27.85■■■□□ 2.05
SNX11-212ENST00000583320 VPS8Q8N3P4 1428 aa27.84■■■□□ 2.05
SNX11-212ENST00000583320 CEP152O94986 1710 aa27.84■■■□□ 2.05
SNX11-212ENST00000583320 SCAF11Q99590 1463 aaKnown RBP27.83■■■□□ 2.05
SNX11-212ENST00000583320 MAST1Q9Y2H9 1570 aa27.81■■■□□ 2.04
SNX11-212ENST00000583320 EIF2AK4Q9P2K8 1649 aaKnown RBP27.81■■■□□ 2.04
SNX11-212ENST00000583320 CFAP65Q6ZU64 1925 aaKnown RBP27.8■■■□□ 2.04
SNX11-212ENST00000583320 LTKP29376 864 aa27.79■■■□□ 2.04
SNX11-212ENST00000583320 ARHGAP23Q9P227 1491 aa27.78■■■□□ 2.04
SNX11-212ENST00000583320 TSPY4P0CV99 314 aa27.78■■■□□ 2.04
SNX11-212ENST00000583320 TSPY10P0CW01 314 aa27.78■■■□□ 2.04
SNX11-212ENST00000583320 SLIT1O75093 1534 aa27.77■■■□□ 2.04
SNX11-212ENST00000583320 POTEAQ6S8J7 498 aa27.7■■■□□ 2.02
SNX11-212ENST00000583320 TXNDC2Q86VQ3 553 aa27.7■■■□□ 2.02
SNX11-212ENST00000583320 FAM135BQ49AJ0 1406 aa27.67■■■□□ 2.02
SNX11-212ENST00000583320 PIK3C2BO00750 1634 aa27.67■■■□□ 2.02
SNX11-212ENST00000583320 PRDM15P57071 1507 aaPredicted RBP27.66■■■□□ 2.02
SNX11-212ENST00000583320 ROBO1Q9Y6N7 1651 aa27.65■■■□□ 2.02
SNX11-212ENST00000583320 LRRC9Q6ZRR7 1453 aa27.64■■■□□ 2.02
SNX11-212ENST00000583320 MAP3K1Q13233 1512 aa27.64■■■□□ 2.02
SNX11-212ENST00000583320 TMEM94Q12767 1356 aa27.63■■■□□ 2.01
SNX11-212ENST00000583320 DUOX2Q9NRD8 1548 aa27.63■■■□□ 2.01
SNX11-212ENST00000583320 ARHGAP31Q2M1Z3 1444 aa27.63■■■□□ 2.01
SNX11-212ENST00000583320 SETD1AO15047 1707 aaKnown RBP27.62■■■□□ 2.01
SNX11-212ENST00000583320 TMEM2Q9UHN6 1383 aa27.6■■■□□ 2.01
SNX11-212ENST00000583320 RBM33Q96EV2 1170 aaKnown RBP27.58■■■□□ 2.01
SNX11-212ENST00000583320 EID1Q9Y6B2 187 aa27.58■■■□□ 2.01
SNX11-212ENST00000583320 KIF15Q9NS87 1388 aa27.55■■■□□ 2
SNX11-212ENST00000583320 TET3O43151 1660 aa27.55■■■□□ 2
SNX11-212ENST00000583320 EFCAB6Q5THR3 1501 aa27.54■■■□□ 2
SNX11-212ENST00000583320 MYOM3Q5VTT5 1437 aa27.54■■■□□ 2
SNX11-212ENST00000583320 CROCC2H7BZ55 1655 aa27.53■■■□□ 2
SNX11-212ENST00000583320 KANK4Q5T7N3 995 aaPredicted RBP27.53■■■□□ 2
SNX11-212ENST00000583320 ERBINQ96RT1 1412 aa27.52■■■□□ 2
SNX11-212ENST00000583320 APLP2Q06481 763 aa27.52■■■□□ 2
SNX11-212ENST00000583320 KDM5AP29375 1690 aaKnown RBP27.52■■■□□ 2
SNX11-212ENST00000583320 KCNA6P17658 529 aa27.51■■□□□ 1.99
SNX11-212ENST00000583320 NWD1Q149M9 1564 aa27.51■■□□□ 1.99
SNX11-212ENST00000583320 SLC26A8Q96RN1 970 aa27.5■■□□□ 1.99
SNX11-212ENST00000583320 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.49■■□□□ 1.99
SNX11-212ENST00000583320 ABCC5O15440 1437 aa27.48■■□□□ 1.99
SNX11-212ENST00000583320 PROSER2Q86WR7 435 aaPredicted RBP27.47■■□□□ 1.99
SNX11-212ENST00000583320 PHLPP1O60346 1717 aa27.47■■□□□ 1.99
SNX11-212ENST00000583320 NKTRP30414 1462 aaKnown RBP27.46■■□□□ 1.99
SNX11-212ENST00000583320 IDI1Q13907 227 aa27.46■■□□□ 1.99
SNX11-212ENST00000583320 RRP7BPQ9NSQ0 103 aa27.46■■□□□ 1.99
SNX11-212ENST00000583320 STAG3Q9UJ98 1225 aa27.46■■□□□ 1.99
SNX11-212ENST00000583320 ADGRB3O60242 1522 aa27.43■■□□□ 1.98
SNX11-212ENST00000583320 LMTK2Q8IWU2 1503 aa27.43■■□□□ 1.98
SNX11-212ENST00000583320 COL16A1Q07092 1604 aaPredicted RBP27.4■■□□□ 1.98
SNX11-212ENST00000583320 NOS1P29475 1434 aa27.39■■□□□ 1.97
SNX11-212ENST00000583320 LRP6O75581 1613 aa27.38■■□□□ 1.97
SNX11-212ENST00000583320 PTPN23Q9H3S7 1636 aa27.38■■□□□ 1.97
SNX11-212ENST00000583320 MSH6P52701 1360 aa27.38■■□□□ 1.97
SNX11-212ENST00000583320 JCADQ9P266 1359 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms