RNA–Protein interactions for RNA: ENST00000582980.1

CDH8-208, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 376 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-208ENST00000582980 DEPDC5O75140 1603 aa18.44■□□□□ 0.54
CDH8-208ENST00000582980 SIGLEC1Q9BZZ2 1709 aa18.42■□□□□ 0.54
CDH8-208ENST00000582980 ARID4BQ4LE39 1312 aaPredicted RBP18.42■□□□□ 0.54
CDH8-208ENST00000582980 PRDM15P57071 1507 aaPredicted RBP18.4■□□□□ 0.54
CDH8-208ENST00000582980 KANK1Q14678 1352 aa18.4■□□□□ 0.54
CDH8-208ENST00000582980 MROH1Q8NDA8 1641 aa18.38■□□□□ 0.53
CDH8-208ENST00000582980 TRIM52Q96A61 297 aa18.38■□□□□ 0.53
CDH8-208ENST00000582980 KDM5DQ9BY66 1539 aa18.38■□□□□ 0.53
CDH8-208ENST00000582980 GGT6Q6P531 493 aa18.37■□□□□ 0.53
CDH8-208ENST00000582980 NUP155O75694 1391 aa18.37■□□□□ 0.53
CDH8-208ENST00000582980 FAM135AQ9P2D6 1515 aa18.37■□□□□ 0.53
CDH8-208ENST00000582980 IQGAP3Q86VI3 1631 aa18.36■□□□□ 0.53
CDH8-208ENST00000582980 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.36■□□□□ 0.53
CDH8-208ENST00000582980 ZC3H13Q5T200 1668 aaKnown RBP18.35■□□□□ 0.53
CDH8-208ENST00000582980 PPP6R1Q9UPN7 881 aa18.35■□□□□ 0.53
CDH8-208ENST00000582980 VWDEQ8N2E2 1590 aa18.34■□□□□ 0.53
CDH8-208ENST00000582980 MLECQ14165 292 aa18.32■□□□□ 0.52
CDH8-208ENST00000582980 ABCC3O15438 1527 aa18.31■□□□□ 0.52
CDH8-208ENST00000582980 LMTK2Q8IWU2 1503 aa18.31■□□□□ 0.52
CDH8-208ENST00000582980 CEP152O94986 1710 aa18.31■□□□□ 0.52
CDH8-208ENST00000582980 WASHC2CQ9Y4E1 1318 aa18.3■□□□□ 0.52
CDH8-208ENST00000582980 ESF1Q9H501 851 aaKnown RBP18.3■□□□□ 0.52
CDH8-208ENST00000582980 PZPP20742 1482 aa18.3■□□□□ 0.52
CDH8-208ENST00000582980 TET3O43151 1660 aa18.3■□□□□ 0.52
CDH8-208ENST00000582980 SLC4A1APQ9BWU0 796 aaKnown RBP18.29■□□□□ 0.52
CDH8-208ENST00000582980 CNTLNQ9NXG0 1405 aa18.29■□□□□ 0.52
CDH8-208ENST00000582980 FER1L4A9Z1Z3 1794 aa18.29■□□□□ 0.52
CDH8-208ENST00000582980 CLTCQ00610 1675 aaKnown RBP18.28■□□□□ 0.52
CDH8-208ENST00000582980 CAMSAP1Q5T5Y3 1602 aa18.27■□□□□ 0.52
CDH8-208ENST00000582980 MPHOSPH9Q99550 1183 aa18.27■□□□□ 0.52
CDH8-208ENST00000582980 EFCAB6Q5THR3 1501 aa18.26■□□□□ 0.51
CDH8-208ENST00000582980 MROH2AA6NES4 1674 aa18.25■□□□□ 0.51
CDH8-208ENST00000582980 ADAMTSL3P82987 1691 aa18.25■□□□□ 0.51
CDH8-208ENST00000582980 DHX57Q6P158 1386 aaKnown RBP18.24■□□□□ 0.51
CDH8-208ENST00000582980 MADDQ8WXG6 1647 aa18.23■□□□□ 0.51
CDH8-208ENST00000582980 RPRD2Q5VT52 1461 aaKnown RBP18.22■□□□□ 0.51
CDH8-208ENST00000582980 ARHGAP31Q2M1Z3 1444 aa18.22■□□□□ 0.51
CDH8-208ENST00000582980 E9PCH4 1651 aa18.22■□□□□ 0.51
CDH8-208ENST00000582980 PKD2Q13563 968 aa18.21■□□□□ 0.51
CDH8-208ENST00000582980 RIMS1Q86UR5 1692 aaKnown RBP18.2■□□□□ 0.5
CDH8-208ENST00000582980 NPATQ14207 1427 aa18.19■□□□□ 0.5
CDH8-208ENST00000582980 ZMYM3Q14202 1370 aa18.17■□□□□ 0.5
CDH8-208ENST00000582980 SPHKAPQ2M3C7 1700 aa18.16■□□□□ 0.5
CDH8-208ENST00000582980 CCER1Q8TC90 406 aaPredicted RBP18.16■□□□□ 0.5
CDH8-208ENST00000582980 C3P01024 1663 aa18.15■□□□□ 0.5
CDH8-208ENST00000582980 PREX1Q8TCU6 1659 aa18.15■□□□□ 0.5
CDH8-208ENST00000582980 FOXD1Q16676 465 aa18.14■□□□□ 0.49
CDH8-208ENST00000582980 CLSPNQ9HAW4 1339 aa18.13■□□□□ 0.49
CDH8-208ENST00000582980 ERVK-7P63135 1459 aa18.13■□□□□ 0.49
CDH8-208ENST00000582980 CFAP65Q6ZU64 1925 aaKnown RBP18.12■□□□□ 0.49
CDH8-208ENST00000582980 PTPRTO14522 1441 aa18.12■□□□□ 0.49
CDH8-208ENST00000582980 TRPM2O94759 1503 aa18.12■□□□□ 0.49
CDH8-208ENST00000582980 SPATA31D1Q6ZQQ2 1576 aa18.12■□□□□ 0.49
CDH8-208ENST00000582980 NOS1P29475 1434 aa18.11■□□□□ 0.49
CDH8-208ENST00000582980 ANKRD30BQ9BXX2 1392 aa18.1■□□□□ 0.49
CDH8-208ENST00000582980 PTPRMP28827 1452 aa18.09■□□□□ 0.49
CDH8-208ENST00000582980 CCDC144AA2RUR9 1427 aa18.08■□□□□ 0.49
CDH8-208ENST00000582980 PLA2R1Q13018 1463 aa18.07■□□□□ 0.48
CDH8-208ENST00000582980 FBXO31Q5XUX0 539 aaPredicted RBP18.07■□□□□ 0.48
CDH8-208ENST00000582980 SYNMO15061 1565 aa18.07■□□□□ 0.48
CDH8-208ENST00000582980 KDM4FA0A1W2PPD8 638 aa18.06■□□□□ 0.48
CDH8-208ENST00000582980 CEBPAP49715 358 aaPredicted RBP18.06■□□□□ 0.48
CDH8-208ENST00000582980 TNRQ92752 1358 aa18.05■□□□□ 0.48
CDH8-208ENST00000582980 PLPPR3Q6T4P5 718 aa18.05■□□□□ 0.48
CDH8-208ENST00000582980 PIK3C2BO00750 1634 aa18.05■□□□□ 0.48
CDH8-208ENST00000582980 CLTCL1P53675 1640 aa18.05■□□□□ 0.48
CDH8-208ENST00000582980 SLC52A1Q9NWF4 448 aa18.04■□□□□ 0.48
CDH8-208ENST00000582980 NLRP1Q9C000 1473 aa18.01■□□□□ 0.47
CDH8-208ENST00000582980 UGGT1Q9NYU2 1555 aa18.01■□□□□ 0.47
CDH8-208ENST00000582980 KIF1BO60333 1816 aa18.01■□□□□ 0.47
CDH8-208ENST00000582980 MYO3AQ8NEV4 1616 aa18■□□□□ 0.47
CDH8-208ENST00000582980 SETD1BQ9UPS6 1966 aaKnown RBP18■□□□□ 0.47
CDH8-208ENST00000582980 NEURL4Q96JN8 1562 aa17.97■□□□□ 0.47
CDH8-208ENST00000582980 NEUROD1Q13562 356 aa17.97■□□□□ 0.47
CDH8-208ENST00000582980 IDI1Q13907 227 aa17.97■□□□□ 0.47
CDH8-208ENST00000582980 SIN3AQ96ST3 1273 aa17.97■□□□□ 0.47
CDH8-208ENST00000582980 KDM5AP29375 1690 aaKnown RBP17.96■□□□□ 0.47
CDH8-208ENST00000582980 ADGRB3O60242 1522 aa17.96■□□□□ 0.47
CDH8-208ENST00000582980 STAG3Q9UJ98 1225 aa17.95■□□□□ 0.46
CDH8-208ENST00000582980 ZNF142P52746 1687 aaPredicted RBP17.95■□□□□ 0.46
CDH8-208ENST00000582980 TMEM131LA2VDJ0 1609 aa17.94■□□□□ 0.46
CDH8-208ENST00000582980 UHRF1BP1Q6BDS2 1440 aa17.94■□□□□ 0.46
CDH8-208ENST00000582980 CEP170BQ9Y4F5 1589 aaPredicted RBP17.94■□□□□ 0.46
CDH8-208ENST00000582980 A2ML1A8K2U0 1454 aa17.94■□□□□ 0.46
CDH8-208ENST00000582980 TONSLQ96HA7 1378 aa17.93■□□□□ 0.46
CDH8-208ENST00000582980 SPATA31E1Q6ZUB1 1445 aa17.93■□□□□ 0.46
CDH8-208ENST00000582980 CHGAP10645 457 aaKnown RBP17.93■□□□□ 0.46
CDH8-208ENST00000582980 UBR1Q8IWV7 1749 aa17.92■□□□□ 0.46
CDH8-208ENST00000582980 MYO5BQ9ULV0 1848 aa17.91■□□□□ 0.46
CDH8-208ENST00000582980 TIMELESSQ9UNS1 1208 aa17.9■□□□□ 0.46
CDH8-208ENST00000582980 ZNF326Q5BKZ1 582 aaKnown RBP17.88■□□□□ 0.45
CDH8-208ENST00000582980 RGL3Q3MIN7 710 aa17.87■□□□□ 0.45
CDH8-208ENST00000582980 THEMISQ8N1K5 641 aaPredicted RBP17.87■□□□□ 0.45
CDH8-208ENST00000582980 RPGRIP1LQ68CZ1 1315 aa17.87■□□□□ 0.45
CDH8-208ENST00000582980 ZEB1P37275 1124 aaPredicted RBP17.85■□□□□ 0.45
CDH8-208ENST00000582980 IFT172Q9UG01 1749 aa17.85■□□□□ 0.45
CDH8-208ENST00000582980 PPLO60437 1756 aa17.84■□□□□ 0.45
CDH8-208ENST00000582980 NEXMIFQ5QGS0 1516 aa17.84■□□□□ 0.45
CDH8-208ENST00000582980 L3MBTL2Q969R5 705 aa17.84■□□□□ 0.45
CDH8-208ENST00000582980 STAC3Q96MF2 364 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms