RNA–Protein interactions for RNA: ENST00000582513.5

TRAPPC8-210, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 3,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-210ENST00000582513 KLHL34Q8N239 644 aa20.57■□□□□ 0.88
TRAPPC8-210ENST00000582513 NUP155O75694 1391 aa20.57■□□□□ 0.88
TRAPPC8-210ENST00000582513 CARMIL2Q6F5E8 1435 aa20.57■□□□□ 0.88
TRAPPC8-210ENST00000582513 ANKRD50Q9ULJ7 1429 aa20.57■□□□□ 0.88
TRAPPC8-210ENST00000582513 HNRNPMP52272 730 aaKnown RBP eCLIP20.57■□□□□ 0.883e-6■■■■□ 19.4
TRAPPC8-210ENST00000582513 MAGI1Q96QZ7 1491 aaPredicted RBP20.57■□□□□ 0.88
TRAPPC8-210ENST00000582513 HSP90AA1P07900 732 aaKnown RBP20.53■□□□□ 0.88
TRAPPC8-210ENST00000582513 ITSN2Q9NZM3 1697 aa20.53■□□□□ 0.88
TRAPPC8-210ENST00000582513 ZBED9Q6R2W3 1325 aa20.53■□□□□ 0.88
TRAPPC8-210ENST00000582513 TSPY4P0CV99 314 aa20.52■□□□□ 0.88
TRAPPC8-210ENST00000582513 TSPY10P0CW01 314 aa20.52■□□□□ 0.88
TRAPPC8-210ENST00000582513 CARD11Q9BXL7 1154 aa20.51■□□□□ 0.87
TRAPPC8-210ENST00000582513 ADGBQ8N7X0 1667 aa20.5■□□□□ 0.87
TRAPPC8-210ENST00000582513 GSE1Q14687 1217 aa20.5■□□□□ 0.87
TRAPPC8-210ENST00000582513 BCORL1Q5H9F3 1711 aa20.5■□□□□ 0.87
TRAPPC8-210ENST00000582513 ADGRL2O95490 1459 aa20.49■□□□□ 0.87
TRAPPC8-210ENST00000582513 DHX29Q7Z478 1369 aaKnown RBP20.49■□□□□ 0.87
TRAPPC8-210ENST00000582513 C9orf84Q5VXU9 1444 aa20.49■□□□□ 0.87
TRAPPC8-210ENST00000582513 ATP10BO94823 1461 aa20.49■□□□□ 0.87
TRAPPC8-210ENST00000582513 MBD5Q9P267 1494 aa20.49■□□□□ 0.87
TRAPPC8-210ENST00000582513 DCAF11Q8TEB1 546 aa20.48■□□□□ 0.87
TRAPPC8-210ENST00000582513 PPP4R2Q9NY27 417 aa20.48■□□□□ 0.87
TRAPPC8-210ENST00000582513 PAXIP1Q6ZW49 1069 aaPredicted RBP20.48■□□□□ 0.87
TRAPPC8-210ENST00000582513 NUP160Q12769 1436 aa20.47■□□□□ 0.87
TRAPPC8-210ENST00000582513 ST20-MTHFSA0A0A6YYL1 179 aa20.46■□□□□ 0.87
TRAPPC8-210ENST00000582513 CROCC2H7BZ55 1655 aa20.45■□□□□ 0.86
TRAPPC8-210ENST00000582513 ADCY10Q96PN6 1610 aa20.45■□□□□ 0.86
TRAPPC8-210ENST00000582513 ARXQ96QS3 562 aa20.44■□□□□ 0.86
TRAPPC8-210ENST00000582513 CDC42BPAQ5VT25 1732 aa20.44■□□□□ 0.86
TRAPPC8-210ENST00000582513 KIF15Q9NS87 1388 aa20.44■□□□□ 0.86
TRAPPC8-210ENST00000582513 RGS3P49796 1198 aa20.43■□□□□ 0.86
TRAPPC8-210ENST00000582513 ABCC10Q5T3U5 1492 aa20.43■□□□□ 0.86
TRAPPC8-210ENST00000582513 RGL3Q3MIN7 710 aa20.42■□□□□ 0.86
TRAPPC8-210ENST00000582513 FRAT1Q92837 279 aaPredicted RBP20.42■□□□□ 0.86
TRAPPC8-210ENST00000582513 POLR1AO95602 1720 aaPredicted RBP20.41■□□□□ 0.86
TRAPPC8-210ENST00000582513 WASHC2CQ9Y4E1 1318 aa20.41■□□□□ 0.86
TRAPPC8-210ENST00000582513 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.41■□□□□ 0.863e-6■□□□□ 9.2
TRAPPC8-210ENST00000582513 FAM43AQ8N2R8 423 aa20.4■□□□□ 0.86
TRAPPC8-210ENST00000582513 TMC1Q8TDI8 760 aa20.4■□□□□ 0.86
TRAPPC8-210ENST00000582513 ABCA8O94911 1581 aa20.4■□□□□ 0.86
TRAPPC8-210ENST00000582513 KDM5CP41229 1560 aa20.39■□□□□ 0.86
TRAPPC8-210ENST00000582513 RRP9O43818 475 aaKnown RBP20.37■□□□□ 0.85
TRAPPC8-210ENST00000582513 USP35Q9P2H5 1018 aa20.37■□□□□ 0.85
TRAPPC8-210ENST00000582513 PTPRGP23470 1445 aa20.37■□□□□ 0.85
TRAPPC8-210ENST00000582513 CHMP4BQ9H444 224 aaKnown RBP20.37■□□□□ 0.85
TRAPPC8-210ENST00000582513 BBXQ8WY36 941 aaPredicted RBP20.36■□□□□ 0.85
TRAPPC8-210ENST00000582513 PNISRQ8TF01 805 aaKnown RBP20.34■□□□□ 0.85
TRAPPC8-210ENST00000582513 RALGAPBQ86X10 1494 aa20.34■□□□□ 0.85
TRAPPC8-210ENST00000582513 PPM1GO15355 546 aaPredicted RBP20.34■□□□□ 0.85
TRAPPC8-210ENST00000582513 ROCK2O75116 1388 aaKnown RBP20.34■□□□□ 0.85
TRAPPC8-210ENST00000582513 UHRF1BP1Q6BDS2 1440 aa20.33■□□□□ 0.84
TRAPPC8-210ENST00000582513 NUDCQ9Y266 331 aa20.33■□□□□ 0.84
TRAPPC8-210ENST00000582513 SHANK2Q9UPX8 1470 aa20.32■□□□□ 0.84
TRAPPC8-210ENST00000582513 NBPF1Q3BBV0 1214 aa20.32■□□□□ 0.84
TRAPPC8-210ENST00000582513 TAF7LQ5H9L4 462 aa20.32■□□□□ 0.84
TRAPPC8-210ENST00000582513 PNNQ9H307 717 aaKnown RBP20.31■□□□□ 0.84
TRAPPC8-210ENST00000582513 AMER1Q5JTC6 1135 aaPredicted RBP20.3■□□□□ 0.84
TRAPPC8-210ENST00000582513 SMG6Q86US8 1419 aaKnown RBP20.29■□□□□ 0.84
TRAPPC8-210ENST00000582513 NAP1L2Q9ULW6 460 aaPredicted RBP20.28■□□□□ 0.84
TRAPPC8-210ENST00000582513 SAMD9LQ8IVG5 1584 aa20.27■□□□□ 0.83
TRAPPC8-210ENST00000582513 CCDC141Q6ZP82 1450 aa20.26■□□□□ 0.83
TRAPPC8-210ENST00000582513 FAM135AQ9P2D6 1515 aa20.26■□□□□ 0.83
TRAPPC8-210ENST00000582513 ARHGEF12Q9NZN5 1544 aa20.25■□□□□ 0.83
TRAPPC8-210ENST00000582513 CCDC144AA2RUR9 1427 aa20.25■□□□□ 0.83
TRAPPC8-210ENST00000582513 KDM5DQ9BY66 1539 aa20.23■□□□□ 0.83
TRAPPC8-210ENST00000582513 MYBBP1AQ9BQG0 1328 aaKnown RBP20.23■□□□□ 0.83
TRAPPC8-210ENST00000582513 CDC42BPBQ9Y5S2 1711 aa20.23■□□□□ 0.83
TRAPPC8-210ENST00000582513 SYCP2Q9BX26 1530 aa20.23■□□□□ 0.83
TRAPPC8-210ENST00000582513 RRAGDQ9NQL2 400 aaPredicted RBP20.22■□□□□ 0.83
TRAPPC8-210ENST00000582513 ARID3AQ99856 593 aa20.22■□□□□ 0.83
TRAPPC8-210ENST00000582513 ARHGAP5Q13017 1502 aa20.21■□□□□ 0.83
TRAPPC8-210ENST00000582513 ARHGEF5Q12774 1597 aa20.21■□□□□ 0.83
TRAPPC8-210ENST00000582513 CC2D1BQ5T0F9 858 aaKnown RBP20.21■□□□□ 0.83
TRAPPC8-210ENST00000582513 RALBP1Q15311 655 aa20.19■□□□□ 0.82
TRAPPC8-210ENST00000582513 PRAG1Q86YV5 1406 aa20.18■□□□□ 0.82
TRAPPC8-210ENST00000582513 NFKBIBQ15653 356 aa20.18■□□□□ 0.82
TRAPPC8-210ENST00000582513 PLA2R1Q13018 1463 aa20.18■□□□□ 0.82
TRAPPC8-210ENST00000582513 PLEKHH2Q8IVE3 1493 aa20.18■□□□□ 0.82
TRAPPC8-210ENST00000582513 SLC4A3P48751 1232 aa20.17■□□□□ 0.82
TRAPPC8-210ENST00000582513 RSPH4AQ5TD94 716 aa20.17■□□□□ 0.82
TRAPPC8-210ENST00000582513 TTC37Q6PGP7 1564 aa20.17■□□□□ 0.82
TRAPPC8-210ENST00000582513 BRD4O60885 1362 aaPredicted RBP20.16■□□□□ 0.82
TRAPPC8-210ENST00000582513 PREX2Q70Z35 1606 aa20.16■□□□□ 0.82
TRAPPC8-210ENST00000582513 RNF123Q5XPI4 1314 aa20.16■□□□□ 0.82
TRAPPC8-210ENST00000582513 LRPPRCP42704 1394 aaKnown RBP20.15■□□□□ 0.82
TRAPPC8-210ENST00000582513 DHX37Q8IY37 1157 aaKnown RBP20.15■□□□□ 0.82
TRAPPC8-210ENST00000582513 PLCD3Q8N3E9 789 aa20.14■□□□□ 0.81
TRAPPC8-210ENST00000582513 KTN1Q86UP2 1357 aaKnown RBP20.14■□□□□ 0.81
TRAPPC8-210ENST00000582513 A2MP01023 1474 aa20.14■□□□□ 0.81
TRAPPC8-210ENST00000582513 ERCC6L2Q5T890 1561 aa20.13■□□□□ 0.81
TRAPPC8-210ENST00000582513 DISP3Q9P2K9 1392 aa20.13■□□□□ 0.81
TRAPPC8-210ENST00000582513 NLRP13Q86W25 1043 aa20.13■□□□□ 0.81
TRAPPC8-210ENST00000582513 CANXP27824 592 aaKnown RBP20.13■□□□□ 0.81
TRAPPC8-210ENST00000582513 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.12■□□□□ 0.815e-7■■■■□ 21.6
TRAPPC8-210ENST00000582513 PER1O15534 1290 aaPredicted RBP20.12■□□□□ 0.81
TRAPPC8-210ENST00000582513 PANK3Q9H999 370 aa20.12■□□□□ 0.81
TRAPPC8-210ENST00000582513 CDCA7LQ96GN5 454 aa20.12■□□□□ 0.81
TRAPPC8-210ENST00000582513 TESK2Q96S53 571 aa20.11■□□□□ 0.81
TRAPPC8-210ENST00000582513 ZHX1Q9UKY1 873 aaPredicted RBP20.1■□□□□ 0.81
TRAPPC8-210ENST00000582513 TRPM1Q7Z4N2 1603 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms