RNA–Protein interactions for RNA: ENST00000581705.5

SNX11-209, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 1,426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-209ENST00000581705 PTPRTO14522 1441 aa31.21■■■□□ 2.59
SNX11-209ENST00000581705 FAM135AQ9P2D6 1515 aa31.2■■■□□ 2.59
SNX11-209ENST00000581705 CERKQ8TCT0 537 aa31.2■■■□□ 2.59
SNX11-209ENST00000581705 MYO3AQ8NEV4 1616 aa31.18■■■□□ 2.58
SNX11-209ENST00000581705 KDM5DQ9BY66 1539 aa31.17■■■□□ 2.58
SNX11-209ENST00000581705 CAMSAP1Q5T5Y3 1602 aa31.16■■■□□ 2.58
SNX11-209ENST00000581705 WASHC2CQ9Y4E1 1318 aa31.15■■■□□ 2.58
SNX11-209ENST00000581705 ZNF142P52746 1687 aaPredicted RBP31.15■■■□□ 2.58
SNX11-209ENST00000581705 CEP170BQ9Y4F5 1589 aaPredicted RBP31.13■■■□□ 2.57
SNX11-209ENST00000581705 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.13■■■□□ 2.57
SNX11-209ENST00000581705 PZPP20742 1482 aa31.11■■■□□ 2.57
SNX11-209ENST00000581705 FGD6Q6ZV73 1430 aa31.09■■■□□ 2.57
SNX11-209ENST00000581705 PTPN23Q9H3S7 1636 aa31.09■■■□□ 2.57
SNX11-209ENST00000581705 RNF17Q9BXT8 1623 aaKnown RBP31.09■■■□□ 2.57
SNX11-209ENST00000581705 PLA2R1Q13018 1463 aa31.08■■■□□ 2.57
SNX11-209ENST00000581705 FBXO31Q5XUX0 539 aaPredicted RBP31.08■■■□□ 2.57
SNX11-209ENST00000581705 ABCC5O15440 1437 aa31.08■■■□□ 2.57
SNX11-209ENST00000581705 EIF2AK4Q9P2K8 1649 aaKnown RBP31.06■■■□□ 2.56
SNX11-209ENST00000581705 TNRQ92752 1358 aa31.06■■■□□ 2.56
SNX11-209ENST00000581705 A2ML1A8K2U0 1454 aa31.06■■■□□ 2.56
SNX11-209ENST00000581705 SHANK2Q9UPX8 1470 aa31.06■■■□□ 2.56
SNX11-209ENST00000581705 NCKAP5LQ9HCH0 1330 aa31.05■■■□□ 2.56
SNX11-209ENST00000581705 DUOX2Q9NRD8 1548 aa31.04■■■□□ 2.56
SNX11-209ENST00000581705 TCOF1Q13428 1488 aaKnown RBP31.04■■■□□ 2.56
SNX11-209ENST00000581705 PKD2Q13563 968 aa31.02■■■□□ 2.56
SNX11-209ENST00000581705 CROCC2H7BZ55 1655 aa31.01■■■□□ 2.55
SNX11-209ENST00000581705 ABCC3O15438 1527 aa31.01■■■□□ 2.55
SNX11-209ENST00000581705 DAPK1P53355 1430 aa31.01■■■□□ 2.55
SNX11-209ENST00000581705 DNMT1P26358 1616 aaKnown RBP31■■■□□ 2.55
SNX11-209ENST00000581705 KIF15Q9NS87 1388 aa31■■■□□ 2.55
SNX11-209ENST00000581705 ZC3H13Q5T200 1668 aaKnown RBP30.98■■■□□ 2.55
SNX11-209ENST00000581705 MROH1Q8NDA8 1641 aa30.98■■■□□ 2.55
SNX11-209ENST00000581705 LTBP4Q8N2S1 1624 aa30.97■■■□□ 2.55
SNX11-209ENST00000581705 RRP7BPQ9NSQ0 103 aa30.96■■■□□ 2.55
SNX11-209ENST00000581705 ERBINQ96RT1 1412 aa30.94■■■□□ 2.54
SNX11-209ENST00000581705 NLRP1Q9C000 1473 aa30.93■■■□□ 2.54
SNX11-209ENST00000581705 SPATA31D1Q6ZQQ2 1576 aa30.88■■■□□ 2.53
SNX11-209ENST00000581705 PRDM15P57071 1507 aaPredicted RBP30.88■■■□□ 2.53
SNX11-209ENST00000581705 ANKRD30AQ9BXX3 1397 aa30.87■■■□□ 2.53
SNX11-209ENST00000581705 FAM50AQ14320 339 aaKnown RBP30.86■■■□□ 2.53
SNX11-209ENST00000581705 THEMISQ8N1K5 641 aaPredicted RBP30.86■■■□□ 2.53
SNX11-209ENST00000581705 CHIC2Q9UKJ5 165 aa30.86■■■□□ 2.53
SNX11-209ENST00000581705 ERVK-7P63135 1459 aa30.86■■■□□ 2.53
SNX11-209ENST00000581705 CEP152O94986 1710 aa30.86■■■□□ 2.53
SNX11-209ENST00000581705 ZNF335Q9H4Z2 1342 aaPredicted RBP30.86■■■□□ 2.53
SNX11-209ENST00000581705 IQSEC2Q5JU85 1478 aa30.84■■■□□ 2.53
SNX11-209ENST00000581705 UGGT1Q9NYU2 1555 aa30.84■■■□□ 2.53
SNX11-209ENST00000581705 DEPDC5O75140 1603 aa30.82■■■□□ 2.52
SNX11-209ENST00000581705 ARHGAP31Q2M1Z3 1444 aa30.81■■■□□ 2.52
SNX11-209ENST00000581705 NEURL4Q96JN8 1562 aa30.8■■■□□ 2.52
SNX11-209ENST00000581705 POLR1AO95602 1720 aaPredicted RBP30.8■■■□□ 2.52
SNX11-209ENST00000581705 ANKLE2Q86XL3 938 aa30.8■■■□□ 2.52
SNX11-209ENST00000581705 ADGRL2O95490 1459 aa30.79■■■□□ 2.52
SNX11-209ENST00000581705 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.79■■■□□ 2.52
SNX11-209ENST00000581705 KANK1Q14678 1352 aa30.76■■■□□ 2.51
SNX11-209ENST00000581705 CFAP65Q6ZU64 1925 aaKnown RBP30.73■■■□□ 2.51
SNX11-209ENST00000581705 MED14O60244 1454 aa30.73■■■□□ 2.51
SNX11-209ENST00000581705 VWDEQ8N2E2 1590 aa30.71■■■□□ 2.51
SNX11-209ENST00000581705 LMTK2Q8IWU2 1503 aa30.71■■■□□ 2.51
SNX11-209ENST00000581705 NPHP4O75161 1426 aaPredicted RBP30.69■■■□□ 2.5
SNX11-209ENST00000581705 ANKRD50Q9ULJ7 1429 aa30.66■■■□□ 2.5
SNX11-209ENST00000581705 UBR1Q8IWV7 1749 aa30.66■■■□□ 2.5
SNX11-209ENST00000581705 ITGAEP38570 1179 aa30.63■■■□□ 2.49
SNX11-209ENST00000581705 CPS1P31327 1500 aa30.61■■■□□ 2.49
SNX11-209ENST00000581705 IQGAP1P46940 1657 aa30.61■■■□□ 2.49
SNX11-209ENST00000581705 EFCAB6Q5THR3 1501 aa30.6■■■□□ 2.49
SNX11-209ENST00000581705 ROCK1Q13464 1354 aa30.59■■■□□ 2.49
SNX11-209ENST00000581705 ARHGAP23Q9P227 1491 aa30.59■■■□□ 2.49
SNX11-209ENST00000581705 UBAP1LF5GYI3 381 aa30.58■■■□□ 2.49
SNX11-209ENST00000581705 SLIT1O75093 1534 aa30.58■■■□□ 2.49
SNX11-209ENST00000581705 SCAF11Q99590 1463 aaKnown RBP30.57■■■□□ 2.48
SNX11-209ENST00000581705 HFM1A2PYH4 1435 aa30.57■■■□□ 2.48
SNX11-209ENST00000581705 PIK3C2BO00750 1634 aa30.55■■■□□ 2.48
SNX11-209ENST00000581705 NOS1P29475 1434 aa30.55■■■□□ 2.48
SNX11-209ENST00000581705 HRCP23327 699 aa30.55■■■□□ 2.48
SNX11-209ENST00000581705 SETD5Q9C0A6 1442 aa30.54■■■□□ 2.48
SNX11-209ENST00000581705 LTKP29376 864 aa30.54■■■□□ 2.48
SNX11-209ENST00000581705 IDI1Q13907 227 aa30.54■■■□□ 2.48
SNX11-209ENST00000581705 TXNDC2Q86VQ3 553 aa30.53■■■□□ 2.48
SNX11-209ENST00000581705 SYNMO15061 1565 aa30.52■■■□□ 2.48
SNX11-209ENST00000581705 TMEM2Q9UHN6 1383 aa30.51■■■□□ 2.47
SNX11-209ENST00000581705 KDM5AP29375 1690 aaKnown RBP30.51■■■□□ 2.47
SNX11-209ENST00000581705 RPRD2Q5VT52 1461 aaKnown RBP30.5■■■□□ 2.47
SNX11-209ENST00000581705 STAG3Q9UJ98 1225 aa30.5■■■□□ 2.47
SNX11-209ENST00000581705 EID1Q9Y6B2 187 aa30.49■■■□□ 2.47
SNX11-209ENST00000581705 GCC2Q8IWJ2 1684 aa30.48■■■□□ 2.47
SNX11-209ENST00000581705 SLC52A1Q9NWF4 448 aa30.47■■■□□ 2.47
SNX11-209ENST00000581705 UNC13BO14795 1591 aa30.47■■■□□ 2.47
SNX11-209ENST00000581705 ACIN1Q9UKV3 1341 aaKnown RBP30.46■■■□□ 2.47
SNX11-209ENST00000581705 NAIPQ13075 1403 aa30.46■■■□□ 2.47
SNX11-209ENST00000581705 TET3O43151 1660 aa30.46■■■□□ 2.47
SNX11-209ENST00000581705 STRCP1A6NGW2 1772 aa30.43■■■□□ 2.46
SNX11-209ENST00000581705 RAB3GAP2Q9H2M9 1393 aa30.42■■■□□ 2.46
SNX11-209ENST00000581705 TOM1O60784 492 aa30.41■■■□□ 2.46
SNX11-209ENST00000581705 ADGRB3O60242 1522 aa30.41■■■□□ 2.46
SNX11-209ENST00000581705 LRRC7Q96NW7 1537 aa30.39■■■□□ 2.46
SNX11-209ENST00000581705 IQGAP3Q86VI3 1631 aa30.35■■■□□ 2.45
SNX11-209ENST00000581705 PIP4K2BP78356 416 aa30.34■■■□□ 2.45
SNX11-209ENST00000581705 NUP155O75694 1391 aa30.32■■■□□ 2.44
SNX11-209ENST00000581705 DISP3Q9P2K9 1392 aa30.32■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms