RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.56□□□□□ -0.247e-9■■□□□ 13.5
CDK5RAP3-220ENST00000581160 PPP6R1Q9UPN7 881 aa13.56□□□□□ -0.24
CDK5RAP3-220ENST00000581160 NUP155O75694 1391 aa13.56□□□□□ -0.24
CDK5RAP3-220ENST00000581160 ARID4BQ4LE39 1312 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP3-220ENST00000581160 MPHOSPH9Q99550 1183 aa13.54□□□□□ -0.24
CDK5RAP3-220ENST00000581160 KANK1Q14678 1352 aa13.53□□□□□ -0.24
CDK5RAP3-220ENST00000581160 UNC13BO14795 1591 aa13.53□□□□□ -0.24
CDK5RAP3-220ENST00000581160 DEPDC5O75140 1603 aa13.52□□□□□ -0.25
CDK5RAP3-220ENST00000581160 RNF17Q9BXT8 1623 aaKnown RBP13.52□□□□□ -0.25
CDK5RAP3-220ENST00000581160 SIGLEC1Q9BZZ2 1709 aa13.52□□□□□ -0.25
CDK5RAP3-220ENST00000581160 KDM5DQ9BY66 1539 aa13.51□□□□□ -0.25
CDK5RAP3-220ENST00000581160 MLECQ14165 292 aa13.51□□□□□ -0.25
CDK5RAP3-220ENST00000581160 SLC4A1APQ9BWU0 796 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP3-220ENST00000581160 MROH1Q8NDA8 1641 aa13.5□□□□□ -0.25
CDK5RAP3-220ENST00000581160 WASHC2CQ9Y4E1 1318 aa13.5□□□□□ -0.25
CDK5RAP3-220ENST00000581160 VWDEQ8N2E2 1590 aa13.49□□□□□ -0.25
CDK5RAP3-220ENST00000581160 PRDM15P57071 1507 aaPredicted RBP13.49□□□□□ -0.25
CDK5RAP3-220ENST00000581160 PZPP20742 1482 aa13.49□□□□□ -0.25
CDK5RAP3-220ENST00000581160 DHX57Q6P158 1386 aaKnown RBP13.49□□□□□ -0.25
CDK5RAP3-220ENST00000581160 FAM135AQ9P2D6 1515 aa13.48□□□□□ -0.25
CDK5RAP3-220ENST00000581160 IQGAP3Q86VI3 1631 aa13.47□□□□□ -0.25
CDK5RAP3-220ENST00000581160 PKD2Q13563 968 aa13.47□□□□□ -0.25
CDK5RAP3-220ENST00000581160 ESF1Q9H501 851 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP3-220ENST00000581160 LMTK2Q8IWU2 1503 aa13.47□□□□□ -0.25
CDK5RAP3-220ENST00000581160 CCER1Q8TC90 406 aaPredicted RBP13.45□□□□□ -0.26
CDK5RAP3-220ENST00000581160 ABCC3O15438 1527 aa13.44□□□□□ -0.26
CDK5RAP3-220ENST00000581160 ARHGAP31Q2M1Z3 1444 aa13.42□□□□□ -0.26
CDK5RAP3-220ENST00000581160 CNTLNQ9NXG0 1405 aa13.42□□□□□ -0.26
CDK5RAP3-220ENST00000581160 FOXD1Q16676 465 aa13.42□□□□□ -0.26
CDK5RAP3-220ENST00000581160 TET3O43151 1660 aa13.42□□□□□ -0.26
CDK5RAP3-220ENST00000581160 ZC3H13Q5T200 1668 aaKnown RBP13.42□□□□□ -0.26
CDK5RAP3-220ENST00000581160 ZMYM3Q14202 1370 aa13.42□□□□□ -0.26
CDK5RAP3-220ENST00000581160 CLSPNQ9HAW4 1339 aa13.41□□□□□ -0.26
CDK5RAP3-220ENST00000581160 CEP152O94986 1710 aa13.41□□□□□ -0.26
CDK5RAP3-220ENST00000581160 ANKRD30BQ9BXX2 1392 aa13.39□□□□□ -0.27
CDK5RAP3-220ENST00000581160 RPRD2Q5VT52 1461 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP3-220ENST00000581160 CLTCQ00610 1675 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP3-220ENST00000581160 CAMSAP1Q5T5Y3 1602 aa13.39□□□□□ -0.27
CDK5RAP3-220ENST00000581160 EFCAB6Q5THR3 1501 aa13.39□□□□□ -0.27
CDK5RAP3-220ENST00000581160 NPATQ14207 1427 aa13.39□□□□□ -0.27
CDK5RAP3-220ENST00000581160 E9PCH4 1651 aa13.38□□□□□ -0.27
CDK5RAP3-220ENST00000581160 ADAMTSL3P82987 1691 aa13.38□□□□□ -0.27
CDK5RAP3-220ENST00000581160 PTPRTO14522 1441 aa13.38□□□□□ -0.27
CDK5RAP3-220ENST00000581160 FBXO31Q5XUX0 539 aaPredicted RBP13.36□□□□□ -0.27
CDK5RAP3-220ENST00000581160 MROH2AA6NES4 1674 aa13.36□□□□□ -0.27
CDK5RAP3-220ENST00000581160 PLA2R1Q13018 1463 aa13.36□□□□□ -0.27
CDK5RAP3-220ENST00000581160 FER1L4A9Z1Z3 1794 aa13.35□□□□□ -0.27
CDK5RAP3-220ENST00000581160 SIN3AQ96ST3 1273 aa13.35□□□□□ -0.27
CDK5RAP3-220ENST00000581160 NOS1P29475 1434 aa13.34□□□□□ -0.27
CDK5RAP3-220ENST00000581160 CEBPAP49715 358 aaPredicted RBP13.34□□□□□ -0.27
CDK5RAP3-220ENST00000581160 MADDQ8WXG6 1647 aa13.34□□□□□ -0.27
CDK5RAP3-220ENST00000581160 CFAP65Q6ZU64 1925 aaKnown RBP13.33□□□□□ -0.28
CDK5RAP3-220ENST00000581160 KDM4FA0A1W2PPD8 638 aa13.33□□□□□ -0.28
CDK5RAP3-220ENST00000581160 NEUROD1Q13562 356 aa13.32□□□□□ -0.28
CDK5RAP3-220ENST00000581160 SLC52A1Q9NWF4 448 aa13.32□□□□□ -0.28
CDK5RAP3-220ENST00000581160 RIMS1Q86UR5 1692 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP3-220ENST00000581160 ERVK-7P63135 1459 aa13.31□□□□□ -0.28
CDK5RAP3-220ENST00000581160 SPHKAPQ2M3C7 1700 aa13.3□□□□□ -0.28
CDK5RAP3-220ENST00000581160 TRPM2O94759 1503 aa13.3□□□□□ -0.28
CDK5RAP3-220ENST00000581160 SPATA31D1Q6ZQQ2 1576 aa13.3□□□□□ -0.28
CDK5RAP3-220ENST00000581160 IDI1Q13907 227 aa13.3□□□□□ -0.28
CDK5RAP3-220ENST00000581160 C3P01024 1663 aa13.3□□□□□ -0.28
CDK5RAP3-220ENST00000581160 PREX1Q8TCU6 1659 aa13.3□□□□□ -0.28
CDK5RAP3-220ENST00000581160 CCDC144AA2RUR9 1427 aa13.3□□□□□ -0.28
CDK5RAP3-220ENST00000581160 TIMELESSQ9UNS1 1208 aa13.29□□□□□ -0.28
CDK5RAP3-220ENST00000581160 PTPRMP28827 1452 aa13.29□□□□□ -0.28
CDK5RAP3-220ENST00000581160 PLPPR3Q6T4P5 718 aa13.28□□□□□ -0.28
CDK5RAP3-220ENST00000581160 TNRQ92752 1358 aa13.28□□□□□ -0.28
CDK5RAP3-220ENST00000581160 SYNMO15061 1565 aa13.27□□□□□ -0.29
CDK5RAP3-220ENST00000581160 CLTCL1P53675 1640 aa13.25□□□□□ -0.29
CDK5RAP3-220ENST00000581160 ZEB1P37275 1124 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-220ENST00000581160 SETD1BQ9UPS6 1966 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-220ENST00000581160 PIK3C2BO00750 1634 aa13.24□□□□□ -0.29
CDK5RAP3-220ENST00000581160 CHGAP10645 457 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP3-220ENST00000581160 UGGT1Q9NYU2 1555 aa13.24□□□□□ -0.29
CDK5RAP3-220ENST00000581160 NLRP1Q9C000 1473 aa13.23□□□□□ -0.29
CDK5RAP3-220ENST00000581160 SPATA31E1Q6ZUB1 1445 aa13.22□□□□□ -0.29
CDK5RAP3-220ENST00000581160 RGL3Q3MIN7 710 aa13.22□□□□□ -0.29
CDK5RAP3-220ENST00000581160 L3MBTL2Q969R5 705 aa13.22□□□□□ -0.29
CDK5RAP3-220ENST00000581160 STAG3Q9UJ98 1225 aa13.22□□□□□ -0.29
CDK5RAP3-220ENST00000581160 NEURL4Q96JN8 1562 aa13.22□□□□□ -0.29
CDK5RAP3-220ENST00000581160 TONSLQ96HA7 1378 aa13.21□□□□□ -0.29
CDK5RAP3-220ENST00000581160 RPGRIP1LQ68CZ1 1315 aa13.21□□□□□ -0.29
CDK5RAP3-220ENST00000581160 KIF1BO60333 1816 aa13.21□□□□□ -0.29
CDK5RAP3-220ENST00000581160 STAC3Q96MF2 364 aa13.21□□□□□ -0.29
CDK5RAP3-220ENST00000581160 ZNF326Q5BKZ1 582 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-220ENST00000581160 PPP1R15AO75807 674 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-220ENST00000581160 THEMISQ8N1K5 641 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-220ENST00000581160 DCAF11Q8TEB1 546 aa13.19□□□□□ -0.3
CDK5RAP3-220ENST00000581160 TMEM131LA2VDJ0 1609 aa13.19□□□□□ -0.3
CDK5RAP3-220ENST00000581160 A2ML1A8K2U0 1454 aa13.18□□□□□ -0.3
CDK5RAP3-220ENST00000581160 ADGRB3O60242 1522 aa13.18□□□□□ -0.3
CDK5RAP3-220ENST00000581160 HDGFP51858 240 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP3-220ENST00000581160 KDM5AP29375 1690 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-220ENST00000581160 KDM2AQ9Y2K7 1162 aa13.16□□□□□ -0.3
CDK5RAP3-220ENST00000581160 UHRF1BP1Q6BDS2 1440 aa13.15□□□□□ -0.3
CDK5RAP3-220ENST00000581160 MYO3AQ8NEV4 1616 aa13.15□□□□□ -0.3
CDK5RAP3-220ENST00000581160 VGFO15240 615 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-220ENST00000581160 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.15□□□□□ -0.3
CDK5RAP3-220ENST00000581160 UBR1Q8IWV7 1749 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms