RNA–Protein interactions for RNA: ENST00000581055.1

TOP2A-205, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 4

Gene TOP2A, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-205ENST00000581055 CEBPAP49715 358 aaPredicted RBP27.56■■■□□ 2
TOP2A-205ENST00000581055 ROCK1Q13464 1354 aa27.54■■■□□ 2
TOP2A-205ENST00000581055 ZMYM3Q14202 1370 aa27.54■■■□□ 2
TOP2A-205ENST00000581055 PTPRKQ15262 1439 aa27.54■■■□□ 2
TOP2A-205ENST00000581055 WASHC2CQ9Y4E1 1318 aa27.54■■■□□ 2
TOP2A-205ENST00000581055 EIF2AK4Q9P2K8 1649 aaKnown RBP27.52■■■□□ 2
TOP2A-205ENST00000581055 FAM135AQ9P2D6 1515 aa27.51■■□□□ 1.99
TOP2A-205ENST00000581055 ANKRD50Q9ULJ7 1429 aa27.47■■□□□ 1.99
TOP2A-205ENST00000581055 KDM5DQ9BY66 1539 aa27.46■■□□□ 1.99
TOP2A-205ENST00000581055 RNF17Q9BXT8 1623 aaKnown RBP27.45■■□□□ 1.99
TOP2A-205ENST00000581055 MROH2AA6NES4 1674 aa27.44■■□□□ 1.98
TOP2A-205ENST00000581055 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.43■■□□□ 1.982e-11■■□□□ 14
TOP2A-205ENST00000581055 KANK1Q14678 1352 aa27.43■■□□□ 1.98
TOP2A-205ENST00000581055 NPATQ14207 1427 aa27.42■■□□□ 1.98
TOP2A-205ENST00000581055 CLTCQ00610 1675 aaKnown RBP27.42■■□□□ 1.98
TOP2A-205ENST00000581055 C3P01024 1663 aa27.4■■□□□ 1.98
TOP2A-205ENST00000581055 ABCC3O15438 1527 aa27.37■■□□□ 1.97
TOP2A-205ENST00000581055 PRDM15P57071 1507 aaPredicted RBP27.36■■□□□ 1.97
TOP2A-205ENST00000581055 UHRF1BP1Q6BDS2 1440 aa27.36■■□□□ 1.97
TOP2A-205ENST00000581055 MROH1Q8NDA8 1641 aa27.36■■□□□ 1.97
TOP2A-205ENST00000581055 LMTK3Q96Q04 1460 aa27.36■■□□□ 1.97
TOP2A-205ENST00000581055 PZPP20742 1482 aa27.34■■□□□ 1.97
TOP2A-205ENST00000581055 ZC3H13Q5T200 1668 aaKnown RBP27.32■■□□□ 1.96
TOP2A-205ENST00000581055 DEPDC5O75140 1603 aa27.31■■□□□ 1.96
TOP2A-205ENST00000581055 FBXO31Q5XUX0 539 aaPredicted RBP27.31■■□□□ 1.96
TOP2A-205ENST00000581055 TNRQ92752 1358 aa27.27■■□□□ 1.96
TOP2A-205ENST00000581055 HSPA2P54652 639 aa27.27■■□□□ 1.96
TOP2A-205ENST00000581055 PREX1Q8TCU6 1659 aa27.27■■□□□ 1.96
TOP2A-205ENST00000581055 ARHGAP31Q2M1Z3 1444 aa27.26■■□□□ 1.95
TOP2A-205ENST00000581055 LMTK2Q8IWU2 1503 aa27.26■■□□□ 1.95
TOP2A-205ENST00000581055 HFM1A2PYH4 1435 aa27.25■■□□□ 1.95
TOP2A-205ENST00000581055 NAIPQ13075 1403 aa27.25■■□□□ 1.95
TOP2A-205ENST00000581055 SETD1BQ9UPS6 1966 aaKnown RBP27.25■■□□□ 1.95
TOP2A-205ENST00000581055 VWDEQ8N2E2 1590 aa27.25■■□□□ 1.95
TOP2A-205ENST00000581055 NUP155O75694 1391 aa27.22■■□□□ 1.95
TOP2A-205ENST00000581055 CAMSAP1Q5T5Y3 1602 aa27.2■■□□□ 1.95
TOP2A-205ENST00000581055 ERVK-7P63135 1459 aa27.19■■□□□ 1.94
TOP2A-205ENST00000581055 CEP152O94986 1710 aa27.19■■□□□ 1.94
TOP2A-205ENST00000581055 UNC13BO14795 1591 aa27.18■■□□□ 1.94
TOP2A-205ENST00000581055 NLRP1Q9C000 1473 aa27.16■■□□□ 1.94
TOP2A-205ENST00000581055 SPATA31D1Q6ZQQ2 1576 aa27.16■■□□□ 1.94
TOP2A-205ENST00000581055 A2ML1A8K2U0 1454 aa27.15■■□□□ 1.94
TOP2A-205ENST00000581055 MYO3AQ8NEV4 1616 aa27.14■■□□□ 1.94
TOP2A-205ENST00000581055 EFCAB6Q5THR3 1501 aa27.14■■□□□ 1.94
TOP2A-205ENST00000581055 RPRD2Q5VT52 1461 aaKnown RBP27.13■■□□□ 1.93
TOP2A-205ENST00000581055 CEP170BQ9Y4F5 1589 aaPredicted RBP27.12■■□□□ 1.93
TOP2A-205ENST00000581055 GCC2Q8IWJ2 1684 aa27.11■■□□□ 1.93
TOP2A-205ENST00000581055 TRIM52Q96A61 297 aa27.1■■□□□ 1.93
TOP2A-205ENST00000581055 THEMISQ8N1K5 641 aaPredicted RBP27.09■■□□□ 1.93
TOP2A-205ENST00000581055 ACIN1Q9UKV3 1341 aaKnown RBP27.09■■□□□ 1.93
TOP2A-205ENST00000581055 DMRT2Q9Y5R5 561 aa27.08■■□□□ 1.93
TOP2A-205ENST00000581055 IQGAP3Q86VI3 1631 aa27.08■■□□□ 1.93
TOP2A-205ENST00000581055 TET3O43151 1660 aa27.07■■□□□ 1.92
TOP2A-205ENST00000581055 ZNF142P52746 1687 aaPredicted RBP27.07■■□□□ 1.92
TOP2A-205ENST00000581055 NOS1P29475 1434 aa27.06■■□□□ 1.92
TOP2A-205ENST00000581055 SLC52A1Q9NWF4 448 aa27.05■■□□□ 1.92
TOP2A-205ENST00000581055 PLA2R1Q13018 1463 aa27.03■■□□□ 1.92
TOP2A-205ENST00000581055 PKD2Q13563 968 aa27.03■■□□□ 1.92
TOP2A-205ENST00000581055 SETD5Q9C0A6 1442 aa27.03■■□□□ 1.92
TOP2A-205ENST00000581055 UGGT1Q9NYU2 1555 aa27.02■■□□□ 1.92
TOP2A-205ENST00000581055 STAG3Q9UJ98 1225 aa27.01■■□□□ 1.91
TOP2A-205ENST00000581055 IDI1Q13907 227 aa27■■□□□ 1.91
TOP2A-205ENST00000581055 SLC4A1APQ9BWU0 796 aaKnown RBP26.99■■□□□ 1.91
TOP2A-205ENST00000581055 NCKAP5LQ9HCH0 1330 aa26.97■■□□□ 1.91
TOP2A-205ENST00000581055 ANKLE2Q86XL3 938 aa26.97■■□□□ 1.91
TOP2A-205ENST00000581055 SYNMO15061 1565 aa26.94■■□□□ 1.9
TOP2A-205ENST00000581055 PTPRTO14522 1441 aa26.94■■□□□ 1.9
TOP2A-205ENST00000581055 E9PCH4 1651 aa26.92■■□□□ 1.9
TOP2A-205ENST00000581055 RAB3GAP2Q9H2M9 1393 aa26.92■■□□□ 1.9
TOP2A-205ENST00000581055 CFAP65Q6ZU64 1925 aaKnown RBP26.91■■□□□ 1.9
TOP2A-205ENST00000581055 STRCQ7RTU9 1775 aa26.89■■□□□ 1.9
TOP2A-205ENST00000581055 HRCP23327 699 aa26.89■■□□□ 1.9
TOP2A-205ENST00000581055 MPHOSPH9Q99550 1183 aa26.89■■□□□ 1.9
TOP2A-205ENST00000581055 EID1Q9Y6B2 187 aa26.88■■□□□ 1.89
TOP2A-205ENST00000581055 PIK3C2BO00750 1634 aa26.87■■□□□ 1.89
TOP2A-205ENST00000581055 TMEM2Q9UHN6 1383 aa26.86■■□□□ 1.89
TOP2A-205ENST00000581055 CHGAP10645 457 aaKnown RBP26.85■■□□□ 1.89
TOP2A-205ENST00000581055 TXNDC2Q86VQ3 553 aa26.85■■□□□ 1.89
TOP2A-205ENST00000581055 UBR1Q8IWV7 1749 aa26.85■■□□□ 1.89
TOP2A-205ENST00000581055 ADGRB3O60242 1522 aa26.84■■□□□ 1.89
TOP2A-205ENST00000581055 SLIT1O75093 1534 aa26.83■■□□□ 1.89
TOP2A-205ENST00000581055 ARHGAP23Q9P227 1491 aa26.82■■□□□ 1.88
TOP2A-205ENST00000581055 HDGFP51858 240 aaKnown RBP26.82■■□□□ 1.88
TOP2A-205ENST00000581055 KDM5AP29375 1690 aaKnown RBP26.82■■□□□ 1.88
TOP2A-205ENST00000581055 SCAF11Q99590 1463 aaKnown RBP26.81■■□□□ 1.88
TOP2A-205ENST00000581055 NPHP4O75161 1426 aaPredicted RBP26.8■■□□□ 1.88
TOP2A-205ENST00000581055 MED14O60244 1454 aa26.8■■□□□ 1.88
TOP2A-205ENST00000581055 LTKP29376 864 aa26.79■■□□□ 1.88
TOP2A-205ENST00000581055 TRPM2O94759 1503 aa26.78■■□□□ 1.88
TOP2A-205ENST00000581055 TRIM26Q12899 539 aaPredicted RBP26.77■■□□□ 1.88
TOP2A-205ENST00000581055 FOXD1Q16676 465 aa26.77■■□□□ 1.88
TOP2A-205ENST00000581055 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.75■■□□□ 1.87
TOP2A-205ENST00000581055 SPHKAPQ2M3C7 1700 aa26.75■■□□□ 1.87
TOP2A-205ENST00000581055 NEURL4Q96JN8 1562 aa26.75■■□□□ 1.87
TOP2A-205ENST00000581055 TMEM131LA2VDJ0 1609 aa26.73■■□□□ 1.87
TOP2A-205ENST00000581055 PPP1R15AO75807 674 aaPredicted RBP26.73■■□□□ 1.87
TOP2A-205ENST00000581055 POLR1AO95602 1720 aaPredicted RBP26.73■■□□□ 1.87
TOP2A-205ENST00000581055 RIMS2Q9UQ26 1411 aa26.72■■□□□ 1.87
TOP2A-205ENST00000581055 ZNF326Q5BKZ1 582 aaKnown RBP26.7■■□□□ 1.86
TOP2A-205ENST00000581055 ZFYVE9O95405 1425 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms