RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 CNTLNQ9NXG0 1405 aa34.25■■■■□ 3.07
NDEL1-207ENST00000580012 ESF1Q9H501 851 aaKnown RBP34.25■■■■□ 3.07
NDEL1-207ENST00000580012 RNF17Q9BXT8 1623 aaKnown RBP34.24■■■■□ 3.07
NDEL1-207ENST00000580012 PTPRMP28827 1452 aa34.23■■■■□ 3.07
NDEL1-207ENST00000580012 WASHC2CQ9Y4E1 1318 aa34.22■■■■□ 3.07
NDEL1-207ENST00000580012 MROH1Q8NDA8 1641 aa34.19■■■■□ 3.06
NDEL1-207ENST00000580012 ZMYM3Q14202 1370 aa34.19■■■■□ 3.06
NDEL1-207ENST00000580012 FAM135AQ9P2D6 1515 aa34.19■■■■□ 3.06
NDEL1-207ENST00000580012 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.18■■■■□ 3.068e-10■■□□□ 12.4
NDEL1-207ENST00000580012 KDM5DQ9BY66 1539 aa34.17■■■■□ 3.06
NDEL1-207ENST00000580012 PRDM15P57071 1507 aaPredicted RBP34.14■■■■□ 3.06
NDEL1-207ENST00000580012 CEBPAP49715 358 aaPredicted RBP34.14■■■■□ 3.06
NDEL1-207ENST00000580012 DEPDC5O75140 1603 aa34.14■■■■□ 3.06
NDEL1-207ENST00000580012 FER1L4A9Z1Z3 1794 aa34.13■■■■□ 3.05
NDEL1-207ENST00000580012 KANK1Q14678 1352 aa34.12■■■■□ 3.05
NDEL1-207ENST00000580012 TRIM26Q12899 539 aaPredicted RBP34.11■■■■□ 3.05
NDEL1-207ENST00000580012 ILDR1Q86SU0 546 aaPredicted RBP34.11■■■■□ 3.05
NDEL1-207ENST00000580012 RIMS1Q86UR5 1692 aaKnown RBP34.11■■■■□ 3.05
NDEL1-207ENST00000580012 VWDEQ8N2E2 1590 aa34.11■■■■□ 3.05
NDEL1-207ENST00000580012 ABCC3O15438 1527 aa34.1■■■■□ 3.05
NDEL1-207ENST00000580012 SETD5Q9C0A6 1442 aa34.08■■■■□ 3.05
NDEL1-207ENST00000580012 GCC2Q8IWJ2 1684 aa34.06■■■■□ 3.04
NDEL1-207ENST00000580012 LMTK2Q8IWU2 1503 aa34.05■■■■□ 3.04
NDEL1-207ENST00000580012 NUP155O75694 1391 aa34.05■■■■□ 3.04
NDEL1-207ENST00000580012 UNC13BO14795 1591 aa34.03■■■■□ 3.04
NDEL1-207ENST00000580012 MROH2AA6NES4 1674 aa34.03■■■■□ 3.04
NDEL1-207ENST00000580012 CLTCQ00610 1675 aaKnown RBP34.03■■■■□ 3.04
NDEL1-207ENST00000580012 ARHGAP31Q2M1Z3 1444 aa34.02■■■■□ 3.04
NDEL1-207ENST00000580012 HRCP23327 699 aa34■■■■□ 3.03
NDEL1-207ENST00000580012 PLPPR3Q6T4P5 718 aa34■■■■□ 3.03
NDEL1-207ENST00000580012 ACIN1Q9UKV3 1341 aaKnown RBP33.99■■■■□ 3.03
NDEL1-207ENST00000580012 FBXO31Q5XUX0 539 aaPredicted RBP33.98■■■■□ 3.03
NDEL1-207ENST00000580012 PZPP20742 1482 aa33.98■■■■□ 3.03
NDEL1-207ENST00000580012 NPATQ14207 1427 aa33.97■■■■□ 3.03
NDEL1-207ENST00000580012 ZC3H13Q5T200 1668 aaKnown RBP33.97■■■■□ 3.03
NDEL1-207ENST00000580012 RAB3GAP2Q9H2M9 1393 aa33.96■■■■□ 3.03
NDEL1-207ENST00000580012 C3P01024 1663 aa33.95■■■■□ 3.03
NDEL1-207ENST00000580012 TRIM52Q96A61 297 aa33.93■■■■□ 3.02
NDEL1-207ENST00000580012 IQGAP3Q86VI3 1631 aa33.9■■■■□ 3.02
NDEL1-207ENST00000580012 CEP152O94986 1710 aa33.88■■■■□ 3.01
NDEL1-207ENST00000580012 CAMSAP1Q5T5Y3 1602 aa33.87■■■■□ 3.01
NDEL1-207ENST00000580012 EFCAB6Q5THR3 1501 aa33.86■■■■□ 3.01
NDEL1-207ENST00000580012 RPRD2Q5VT52 1461 aaKnown RBP33.84■■■■□ 3.01
NDEL1-207ENST00000580012 TNRQ92752 1358 aa33.84■■■■□ 3.01
NDEL1-207ENST00000580012 ERVK-7P63135 1459 aa33.83■■■■□ 3.01
NDEL1-207ENST00000580012 LMTK3Q96Q04 1460 aa33.83■■■■□ 3.01
NDEL1-207ENST00000580012 TET3O43151 1660 aa33.81■■■■□ 3
NDEL1-207ENST00000580012 SLC4A1APQ9BWU0 796 aaKnown RBP33.81■■■■□ 3
NDEL1-207ENST00000580012 SPATA31D1Q6ZQQ2 1576 aa33.81■■■■□ 3
NDEL1-207ENST00000580012 NOS1P29475 1434 aa33.8■■■■□ 3
NDEL1-207ENST00000580012 SETD1BQ9UPS6 1966 aaKnown RBP33.8■■■■□ 3
NDEL1-207ENST00000580012 MPHOSPH9Q99550 1183 aa33.8■■■■□ 3
NDEL1-207ENST00000580012 PKD2Q13563 968 aa33.77■■■■□ 3
NDEL1-207ENST00000580012 UHRF1BP1Q6BDS2 1440 aa33.74■■■□□ 2.99
NDEL1-207ENST00000580012 PTPRTO14522 1441 aa33.7■■■□□ 2.99
NDEL1-207ENST00000580012 SLC52A1Q9NWF4 448 aa33.7■■■□□ 2.99
NDEL1-207ENST00000580012 NLRP1Q9C000 1473 aa33.69■■■□□ 2.98
NDEL1-207ENST00000580012 E9PCH4 1651 aa33.69■■■□□ 2.98
NDEL1-207ENST00000580012 IDI1Q13907 227 aa33.68■■■□□ 2.98
NDEL1-207ENST00000580012 PREX1Q8TCU6 1659 aa33.68■■■□□ 2.98
NDEL1-207ENST00000580012 A2ML1A8K2U0 1454 aa33.65■■■□□ 2.98
NDEL1-207ENST00000580012 HSPA2P54652 639 aa33.65■■■□□ 2.98
NDEL1-207ENST00000580012 PLA2R1Q13018 1463 aa33.63■■■□□ 2.97
NDEL1-207ENST00000580012 PCGF6Q9BYE7 350 aa33.63■■■□□ 2.97
NDEL1-207ENST00000580012 FOXD1Q16676 465 aa33.62■■■□□ 2.97
NDEL1-207ENST00000580012 SYNMO15061 1565 aa33.62■■■□□ 2.97
NDEL1-207ENST00000580012 MYO3AQ8NEV4 1616 aa33.6■■■□□ 2.97
NDEL1-207ENST00000580012 CFAP65Q6ZU64 1925 aaKnown RBP33.59■■■□□ 2.97
NDEL1-207ENST00000580012 FBXO41Q8TF61 875 aa33.58■■■□□ 2.97
NDEL1-207ENST00000580012 CEP170BQ9Y4F5 1589 aaPredicted RBP33.57■■■□□ 2.96
NDEL1-207ENST00000580012 THEMISQ8N1K5 641 aaPredicted RBP33.56■■■□□ 2.96
NDEL1-207ENST00000580012 ZNF142P52746 1687 aaPredicted RBP33.52■■■□□ 2.96
NDEL1-207ENST00000580012 UGGT1Q9NYU2 1555 aa33.5■■■□□ 2.95
NDEL1-207ENST00000580012 TRPM2O94759 1503 aa33.49■■■□□ 2.95
NDEL1-207ENST00000580012 PIK3C2BO00750 1634 aa33.49■■■□□ 2.95
NDEL1-207ENST00000580012 ANKRD30BQ9BXX2 1392 aa33.47■■■□□ 2.95
NDEL1-207ENST00000580012 STAG3Q9UJ98 1225 aa33.46■■■□□ 2.95
NDEL1-207ENST00000580012 SPHKAPQ2M3C7 1700 aa33.44■■■□□ 2.94
NDEL1-207ENST00000580012 TMEM2Q9UHN6 1383 aa33.4■■■□□ 2.94
NDEL1-207ENST00000580012 ADGRB3O60242 1522 aa33.39■■■□□ 2.94
NDEL1-207ENST00000580012 ARHGAP23Q9P227 1491 aa33.38■■■□□ 2.93
NDEL1-207ENST00000580012 DHX57Q6P158 1386 aaKnown RBP33.38■■■□□ 2.93
NDEL1-207ENST00000580012 CHGAP10645 457 aaKnown RBP33.38■■■□□ 2.93
NDEL1-207ENST00000580012 ANKLE2Q86XL3 938 aa33.38■■■□□ 2.93
NDEL1-207ENST00000580012 UBR1Q8IWV7 1749 aa33.38■■■□□ 2.93
NDEL1-207ENST00000580012 KDM5AP29375 1690 aaKnown RBP33.38■■■□□ 2.93
NDEL1-207ENST00000580012 CCDC144AA2RUR9 1427 aa33.37■■■□□ 2.93
NDEL1-207ENST00000580012 CLTCL1P53675 1640 aa33.36■■■□□ 2.93
NDEL1-207ENST00000580012 NCKAP5LQ9HCH0 1330 aa33.36■■■□□ 2.93
NDEL1-207ENST00000580012 SLIT1O75093 1534 aa33.36■■■□□ 2.93
NDEL1-207ENST00000580012 TMEM131LA2VDJ0 1609 aa33.35■■■□□ 2.93
NDEL1-207ENST00000580012 LTKP29376 864 aa33.34■■■□□ 2.93
NDEL1-207ENST00000580012 TXNDC2Q86VQ3 553 aa33.32■■■□□ 2.92
NDEL1-207ENST00000580012 DMRT2Q9Y5R5 561 aa33.29■■■□□ 2.92
NDEL1-207ENST00000580012 EID1Q9Y6B2 187 aa33.29■■■□□ 2.92
NDEL1-207ENST00000580012 ZFYVE9O95405 1425 aa33.28■■■□□ 2.92
NDEL1-207ENST00000580012 HDGFP51858 240 aaKnown RBP33.28■■■□□ 2.92
NDEL1-207ENST00000580012 SPATA31E1Q6ZUB1 1445 aa33.28■■■□□ 2.92
NDEL1-207ENST00000580012 STRCQ7RTU9 1775 aa33.26■■■□□ 2.91
NDEL1-207ENST00000580012 RIMS2Q9UQ26 1411 aa33.26■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms