RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 KIF3BO15066 747 aa20.47■□□□□ 0.87
TSEN54-206ENST00000579449 BCORL1Q5H9F3 1711 aa20.45■□□□□ 0.86
TSEN54-206ENST00000579449 KDM5DQ9BY66 1539 aa20.45■□□□□ 0.86
TSEN54-206ENST00000579449 REREQ9P2R6 1566 aa20.45■□□□□ 0.86
TSEN54-206ENST00000579449 DEPDC5O75140 1603 aa20.45■□□□□ 0.86
TSEN54-206ENST00000579449 NUP155O75694 1391 aa20.45■□□□□ 0.86
TSEN54-206ENST00000579449 PZPP20742 1482 aa20.44■□□□□ 0.86
TSEN54-206ENST00000579449 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.44■□□□□ 0.86
TSEN54-206ENST00000579449 MPHOSPH9Q99550 1183 aa20.43■□□□□ 0.86
TSEN54-206ENST00000579449 RNF17Q9BXT8 1623 aaKnown RBP20.42■□□□□ 0.86
TSEN54-206ENST00000579449 IQGAP3Q86VI3 1631 aa20.41■□□□□ 0.86
TSEN54-206ENST00000579449 MROH1Q8NDA8 1641 aa20.41■□□□□ 0.86
TSEN54-206ENST00000579449 SLC4A1APQ9BWU0 796 aaKnown RBP20.4■□□□□ 0.86
TSEN54-206ENST00000579449 SIGLEC1Q9BZZ2 1709 aa20.4■□□□□ 0.86
TSEN54-206ENST00000579449 AGLP35573 1532 aa20.39■□□□□ 0.85
TSEN54-206ENST00000579449 FAM135AQ9P2D6 1515 aa20.39■□□□□ 0.85
TSEN54-206ENST00000579449 PRDM15P57071 1507 aaPredicted RBP20.38■□□□□ 0.85
TSEN54-206ENST00000579449 VWDEQ8N2E2 1590 aa20.37■□□□□ 0.85
TSEN54-206ENST00000579449 KANK1Q14678 1352 aa20.36■□□□□ 0.85
TSEN54-206ENST00000579449 GGT6Q6P531 493 aa20.36■□□□□ 0.85
TSEN54-206ENST00000579449 CLSPNQ9HAW4 1339 aa20.35■□□□□ 0.85
TSEN54-206ENST00000579449 CEP152O94986 1710 aa20.33■□□□□ 0.85
TSEN54-206ENST00000579449 PKD2Q13563 968 aa20.33■□□□□ 0.85
TSEN54-206ENST00000579449 FOXD1Q16676 465 aa20.33■□□□□ 0.85
TSEN54-206ENST00000579449 TET3O43151 1660 aa20.31■□□□□ 0.84
TSEN54-206ENST00000579449 LMTK2Q8IWU2 1503 aa20.29■□□□□ 0.84
TSEN54-206ENST00000579449 ARID4BQ4LE39 1312 aaPredicted RBP20.28■□□□□ 0.84
TSEN54-206ENST00000579449 ABCC3O15438 1527 aa20.27■□□□□ 0.84
TSEN54-206ENST00000579449 E9PCH4 1651 aa20.27■□□□□ 0.84
TSEN54-206ENST00000579449 WASHC2CQ9Y4E1 1318 aa20.27■□□□□ 0.83
TSEN54-206ENST00000579449 ZC3H13Q5T200 1668 aaKnown RBP20.26■□□□□ 0.83
TSEN54-206ENST00000579449 ANKRD30BQ9BXX2 1392 aa20.26■□□□□ 0.83
TSEN54-206ENST00000579449 MLECQ14165 292 aa20.26■□□□□ 0.83
TSEN54-206ENST00000579449 SIN3AQ96ST3 1273 aa20.25■□□□□ 0.83
TSEN54-206ENST00000579449 PPP6R1Q9UPN7 881 aa20.25■□□□□ 0.83
TSEN54-206ENST00000579449 CAMSAP1Q5T5Y3 1602 aa20.24■□□□□ 0.83
TSEN54-206ENST00000579449 EFCAB6Q5THR3 1501 aa20.23■□□□□ 0.83
TSEN54-206ENST00000579449 ZEB1P37275 1124 aaPredicted RBP20.22■□□□□ 0.83
TSEN54-206ENST00000579449 CFAP65Q6ZU64 1925 aaKnown RBP20.21■□□□□ 0.83
TSEN54-206ENST00000579449 NEUROD1Q13562 356 aa20.21■□□□□ 0.83
TSEN54-206ENST00000579449 CLTCQ00610 1675 aaKnown RBP20.21■□□□□ 0.83
TSEN54-206ENST00000579449 SPHKAPQ2M3C7 1700 aa20.19■□□□□ 0.82
TSEN54-206ENST00000579449 PLA2R1Q13018 1463 aa20.18■□□□□ 0.82
TSEN54-206ENST00000579449 NPATQ14207 1427 aa20.17■□□□□ 0.82
TSEN54-206ENST00000579449 RPRD2Q5VT52 1461 aaKnown RBP20.17■□□□□ 0.82
TSEN54-206ENST00000579449 ARHGAP31Q2M1Z3 1444 aa20.16■□□□□ 0.82
TSEN54-206ENST00000579449 ESF1Q9H501 851 aaKnown RBP20.15■□□□□ 0.82
TSEN54-206ENST00000579449 PTPRTO14522 1441 aa20.15■□□□□ 0.82
TSEN54-206ENST00000579449 SENP3Q9H4L4 574 aaPredicted RBP20.14■□□□□ 0.81
TSEN54-206ENST00000579449 FER1L4A9Z1Z3 1794 aa20.13■□□□□ 0.81
TSEN54-206ENST00000579449 TRPM2O94759 1503 aa20.12■□□□□ 0.81
TSEN54-206ENST00000579449 CCDC144AA2RUR9 1427 aa20.1■□□□□ 0.81
TSEN54-206ENST00000579449 CNTLNQ9NXG0 1405 aa20.1■□□□□ 0.81
TSEN54-206ENST00000579449 MROH2AA6NES4 1674 aa20.1■□□□□ 0.81
TSEN54-206ENST00000579449 PREX1Q8TCU6 1659 aa20.1■□□□□ 0.81
TSEN54-206ENST00000579449 NOS1P29475 1434 aa20.09■□□□□ 0.81
TSEN54-206ENST00000579449 CLTCL1P53675 1640 aa20.09■□□□□ 0.81
TSEN54-206ENST00000579449 ZMYM3Q14202 1370 aa20.08■□□□□ 0.81
TSEN54-206ENST00000579449 TONSLQ96HA7 1378 aa20.08■□□□□ 0.8
TSEN54-206ENST00000579449 TIMELESSQ9UNS1 1208 aa20.07■□□□□ 0.8
TSEN54-206ENST00000579449 ADAMTSL3P82987 1691 aa20.07■□□□□ 0.8
TSEN54-206ENST00000579449 SYNMO15061 1565 aa20.06■□□□□ 0.8
TSEN54-206ENST00000579449 MADDQ8WXG6 1647 aa20.05■□□□□ 0.8
TSEN54-206ENST00000579449 ERVK-7P63135 1459 aa20.05■□□□□ 0.8
TSEN54-206ENST00000579449 FBXO31Q5XUX0 539 aaPredicted RBP20.05■□□□□ 0.8
TSEN54-206ENST00000579449 UGGT1Q9NYU2 1555 aa20.04■□□□□ 0.8
TSEN54-206ENST00000579449 KIF1BO60333 1816 aa20.03■□□□□ 0.8
TSEN54-206ENST00000579449 SPATA31D1Q6ZQQ2 1576 aa20.03■□□□□ 0.8
TSEN54-206ENST00000579449 C3P01024 1663 aa20.03■□□□□ 0.8
TSEN54-206ENST00000579449 RIMS1Q86UR5 1692 aaKnown RBP20.03■□□□□ 0.8
TSEN54-206ENST00000579449 PIK3C2BO00750 1634 aa20.01■□□□□ 0.79
TSEN54-206ENST00000579449 L3MBTL2Q969R5 705 aa20■□□□□ 0.79
TSEN54-206ENST00000579449 CEBPAP49715 358 aaPredicted RBP19.98■□□□□ 0.79
TSEN54-206ENST00000579449 SPATA31E1Q6ZUB1 1445 aa19.98■□□□□ 0.79
TSEN54-206ENST00000579449 RGL3Q3MIN7 710 aa19.97■□□□□ 0.79
TSEN54-206ENST00000579449 SLC52A1Q9NWF4 448 aa19.97■□□□□ 0.79
TSEN54-206ENST00000579449 PPP1R15AO75807 674 aaPredicted RBP19.96■□□□□ 0.79
TSEN54-206ENST00000579449 IDI1Q13907 227 aa19.96■□□□□ 0.79
TSEN54-206ENST00000579449 PLPPR3Q6T4P5 718 aa19.96■□□□□ 0.79
TSEN54-206ENST00000579449 NEURL4Q96JN8 1562 aa19.95■□□□□ 0.78
TSEN54-206ENST00000579449 TNRQ92752 1358 aa19.95■□□□□ 0.78
TSEN54-206ENST00000579449 CHGAP10645 457 aaKnown RBP19.94■□□□□ 0.78
TSEN54-206ENST00000579449 ADGRB3O60242 1522 aa19.93■□□□□ 0.78
TSEN54-206ENST00000579449 MYO5BQ9ULV0 1848 aa19.92■□□□□ 0.78
TSEN54-206ENST00000579449 DCAF11Q8TEB1 546 aa19.91■□□□□ 0.78
TSEN54-206ENST00000579449 TMEM131LA2VDJ0 1609 aa19.9■□□□□ 0.78
TSEN54-206ENST00000579449 KDM2AQ9Y2K7 1162 aa19.89■□□□□ 0.77
TSEN54-206ENST00000579449 ZNF326Q5BKZ1 582 aaKnown RBP19.87■□□□□ 0.77
TSEN54-206ENST00000579449 IFT172Q9UG01 1749 aa19.87■□□□□ 0.77
TSEN54-206ENST00000579449 PTPRMP28827 1452 aa19.86■□□□□ 0.77
TSEN54-206ENST00000579449 NLRP1Q9C000 1473 aa19.86■□□□□ 0.77
TSEN54-206ENST00000579449 SETD1BQ9UPS6 1966 aaKnown RBP19.85■□□□□ 0.77
TSEN54-206ENST00000579449 NBPF8Q3BBV2 869 aa19.85■□□□□ 0.77
TSEN54-206ENST00000579449 STAG3Q9UJ98 1225 aa19.85■□□□□ 0.77
TSEN54-206ENST00000579449 PPLO60437 1756 aa19.85■□□□□ 0.77
TSEN54-206ENST00000579449 UHRF1BP1Q6BDS2 1440 aa19.84■□□□□ 0.77
TSEN54-206ENST00000579449 RPGRIP1LQ68CZ1 1315 aa19.83■□□□□ 0.77
TSEN54-206ENST00000579449 A2ML1A8K2U0 1454 aa19.83■□□□□ 0.76
TSEN54-206ENST00000579449 MYO3AQ8NEV4 1616 aa19.83■□□□□ 0.76
TSEN54-206ENST00000579449 UBR1Q8IWV7 1749 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 299.8 ms