RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 CLIP1P30622 1438 aa7.86□□□□□ -1.15
GAPLINC-202ENST00000579007 ADGBQ8N7X0 1667 aa7.86□□□□□ -1.15
GAPLINC-202ENST00000579007 TIAM1Q13009 1591 aa7.86□□□□□ -1.15
GAPLINC-202ENST00000579007 SUPT6HQ7KZ85 1726 aaKnown RBP7.86□□□□□ -1.15
GAPLINC-202ENST00000579007 AGLP35573 1532 aa7.85□□□□□ -1.15
GAPLINC-202ENST00000579007 MLH3Q9UHC1 1453 aa7.85□□□□□ -1.15
GAPLINC-202ENST00000579007 ZNF142P52746 1687 aaPredicted RBP7.85□□□□□ -1.15
GAPLINC-202ENST00000579007 TRAPPC8Q9Y2L5 1435 aa7.85□□□□□ -1.15
GAPLINC-202ENST00000579007 ARID4BQ4LE39 1312 aaPredicted RBP7.84□□□□□ -1.15
GAPLINC-202ENST00000579007 CLTCQ00610 1675 aaKnown RBP7.84□□□□□ -1.15
GAPLINC-202ENST00000579007 TRIM26Q12899 539 aaPredicted RBP7.84□□□□□ -1.15
GAPLINC-202ENST00000579007 MYO3AQ8NEV4 1616 aa7.84□□□□□ -1.15
GAPLINC-202ENST00000579007 UBTFP17480 764 aaKnown RBP7.83□□□□□ -1.16
GAPLINC-202ENST00000579007 ATP7AQ04656 1500 aa7.83□□□□□ -1.16
GAPLINC-202ENST00000579007 EHBP1L1Q8N3D4 1523 aa7.83□□□□□ -1.16
GAPLINC-202ENST00000579007 SETD1BQ9UPS6 1966 aaKnown RBP7.82□□□□□ -1.16
GAPLINC-202ENST00000579007 MKRN4PQ13434 485 aaPredicted RBP7.81□□□□□ -1.16
GAPLINC-202ENST00000579007 GPATCH8Q9UKJ3 1502 aaKnown RBP7.81□□□□□ -1.16
GAPLINC-202ENST00000579007 HSPA2P54652 639 aa7.8□□□□□ -1.16
GAPLINC-202ENST00000579007 HS6ST3Q8IZP7 471 aa7.8□□□□□ -1.16
GAPLINC-202ENST00000579007 BRPF1P55201 1214 aaPredicted RBP7.79□□□□□ -1.16
GAPLINC-202ENST00000579007 MLECQ14165 292 aa7.79□□□□□ -1.16
GAPLINC-202ENST00000579007 EFCAB2Q5VUJ9 269 aa7.79□□□□□ -1.16
GAPLINC-202ENST00000579007 ATP1B4Q9UN42 357 aaPredicted RBP7.79□□□□□ -1.16
GAPLINC-202ENST00000579007 POLR1AO95602 1720 aaPredicted RBP7.78□□□□□ -1.16
GAPLINC-202ENST00000579007 AFAP1Q8N556 730 aa7.78□□□□□ -1.16
GAPLINC-202ENST00000579007 UHRF1BP1Q6BDS2 1440 aa7.77□□□□□ -1.17
GAPLINC-202ENST00000579007 FBXO41Q8TF61 875 aa7.76□□□□□ -1.17
GAPLINC-202ENST00000579007 CDK11AQ9UQ88 783 aaPredicted RBP7.76□□□□□ -1.17
GAPLINC-202ENST00000579007 LTBP4Q8N2S1 1624 aa7.76□□□□□ -1.17
GAPLINC-202ENST00000579007 CEP162Q5TB80 1403 aa7.76□□□□□ -1.17
GAPLINC-202ENST00000579007 CROCC2H7BZ55 1655 aa7.76□□□□□ -1.17
GAPLINC-202ENST00000579007 CEP170BQ9Y4F5 1589 aaPredicted RBP7.76□□□□□ -1.17
GAPLINC-202ENST00000579007 CAMSAP1Q5T5Y3 1602 aa7.75□□□□□ -1.17
GAPLINC-202ENST00000579007 HRCP23327 699 aa7.75□□□□□ -1.17
GAPLINC-202ENST00000579007 CEBPAP49715 358 aaPredicted RBP7.75□□□□□ -1.17
GAPLINC-202ENST00000579007 PLEKHH2Q8IVE3 1493 aa7.75□□□□□ -1.17
GAPLINC-202ENST00000579007 MBD5Q9P267 1494 aa7.75□□□□□ -1.17
GAPLINC-202ENST00000579007 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.74□□□□□ -1.17
GAPLINC-202ENST00000579007 NCOA1Q15788 1441 aa7.74□□□□□ -1.17
GAPLINC-202ENST00000579007 KIAA1107Q9UPP5 1409 aa7.74□□□□□ -1.17
GAPLINC-202ENST00000579007 A2MP01023 1474 aa7.74□□□□□ -1.17
GAPLINC-202ENST00000579007 CAMSAP2Q08AD1 1489 aa7.74□□□□□ -1.17
GAPLINC-202ENST00000579007 RNF17Q9BXT8 1623 aaKnown RBP7.74□□□□□ -1.17
GAPLINC-202ENST00000579007 CEP152O94986 1710 aa7.73□□□□□ -1.17
GAPLINC-202ENST00000579007 ARHGEF5Q12774 1597 aa7.73□□□□□ -1.17
GAPLINC-202ENST00000579007 CNTLNQ9NXG0 1405 aa7.73□□□□□ -1.17
GAPLINC-202ENST00000579007 MROH1Q8NDA8 1641 aa7.73□□□□□ -1.17
GAPLINC-202ENST00000579007 NEURL4Q96JN8 1562 aa7.72□□□□□ -1.17
GAPLINC-202ENST00000579007 NPATQ14207 1427 aa7.72□□□□□ -1.17
GAPLINC-202ENST00000579007 DNMT1P26358 1616 aaKnown RBP7.72□□□□□ -1.17
GAPLINC-202ENST00000579007 APLP2Q06481 763 aa7.72□□□□□ -1.17
GAPLINC-202ENST00000579007 U3KPZ7 1027 aaPredicted RBP7.72□□□□□ -1.17
GAPLINC-202ENST00000579007 NCOA2Q15596 1464 aa7.72□□□□□ -1.17
GAPLINC-202ENST00000579007 ZC3H13Q5T200 1668 aaKnown RBP7.72□□□□□ -1.17
GAPLINC-202ENST00000579007 MTUS2Q5JR59 1369 aa7.71□□□□□ -1.17
GAPLINC-202ENST00000579007 MAST1Q9Y2H9 1570 aa7.71□□□□□ -1.17
GAPLINC-202ENST00000579007 CCDC141Q6ZP82 1450 aa7.71□□□□□ -1.18
GAPLINC-202ENST00000579007 LMOD2Q6P5Q4 547 aa7.71□□□□□ -1.18
GAPLINC-202ENST00000579007 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.71□□□□□ -1.18
GAPLINC-202ENST00000579007 KDM5DQ9BY66 1539 aa7.71□□□□□ -1.18
GAPLINC-202ENST00000579007 FAM135AQ9P2D6 1515 aa7.71□□□□□ -1.18
GAPLINC-202ENST00000579007 CCNB3Q8WWL7 1395 aa7.71□□□□□ -1.18
GAPLINC-202ENST00000579007 EIF2AK4Q9P2K8 1649 aaKnown RBP7.7□□□□□ -1.18
GAPLINC-202ENST00000579007 PTPRTO14522 1441 aa7.7□□□□□ -1.18
GAPLINC-202ENST00000579007 PTPRKQ15262 1439 aa7.7□□□□□ -1.18
GAPLINC-202ENST00000579007 STAG3Q9UJ98 1225 aa7.7□□□□□ -1.18
GAPLINC-202ENST00000579007 SPATA31D1Q6ZQQ2 1576 aa7.7□□□□□ -1.18
GAPLINC-202ENST00000579007 PLA2R1Q13018 1463 aa7.69□□□□□ -1.18
GAPLINC-202ENST00000579007 TCOF1Q13428 1488 aaKnown RBP7.69□□□□□ -1.18
GAPLINC-202ENST00000579007 SPAG9O60271 1321 aaKnown RBP7.69□□□□□ -1.18
GAPLINC-202ENST00000579007 HNRNPMP52272 730 aaKnown RBP eCLIP7.68□□□□□ -1.18
GAPLINC-202ENST00000579007 ZMYND15Q9H091 742 aa7.68□□□□□ -1.18
GAPLINC-202ENST00000579007 ZNF777Q9ULD5 760 aaPredicted RBP7.68□□□□□ -1.18
GAPLINC-202ENST00000579007 ZNF644Q9H582 1327 aaPredicted RBP7.68□□□□□ -1.18
GAPLINC-202ENST00000579007 STRCP1A6NGW2 1772 aa7.68□□□□□ -1.18
GAPLINC-202ENST00000579007 VPS8Q8N3P4 1428 aa7.68□□□□□ -1.18
GAPLINC-202ENST00000579007 IQSEC2Q5JU85 1478 aa7.68□□□□□ -1.18
GAPLINC-202ENST00000579007 GTPBP6O43824 516 aaPredicted RBP7.67□□□□□ -1.18
GAPLINC-202ENST00000579007 NEUROD2Q15784 382 aa7.67□□□□□ -1.18
GAPLINC-202ENST00000579007 CERKQ8TCT0 537 aa7.67□□□□□ -1.18
GAPLINC-202ENST00000579007 RSPH6AQ9H0K4 717 aa7.67□□□□□ -1.18
GAPLINC-202ENST00000579007 MYT1LQ9UL68 1186 aa7.67□□□□□ -1.18
GAPLINC-202ENST00000579007 RTEL1-TNFRSF6BF6WH68 1400 aa7.67□□□□□ -1.18
GAPLINC-202ENST00000579007 PZPP20742 1482 aa7.67□□□□□ -1.18
GAPLINC-202ENST00000579007 LRRC9Q6ZRR7 1453 aa7.67□□□□□ -1.18
GAPLINC-202ENST00000579007 DEPDC5O75140 1603 aa7.67□□□□□ -1.18
GAPLINC-202ENST00000579007 ZMYM3Q14202 1370 aa7.66□□□□□ -1.18
GAPLINC-202ENST00000579007 A2ML1A8K2U0 1454 aa7.66□□□□□ -1.18
GAPLINC-202ENST00000579007 ABCC3O15438 1527 aa7.66□□□□□ -1.18
GAPLINC-202ENST00000579007 PRDM15P57071 1507 aaPredicted RBP7.66□□□□□ -1.18
GAPLINC-202ENST00000579007 IQGAP1P46940 1657 aa7.66□□□□□ -1.18
GAPLINC-202ENST00000579007 UBR1Q8IWV7 1749 aa7.66□□□□□ -1.18
GAPLINC-202ENST00000579007 CFAP65Q6ZU64 1925 aaKnown RBP7.66□□□□□ -1.18
GAPLINC-202ENST00000579007 MAP3K1Q13233 1512 aa7.65□□□□□ -1.18
GAPLINC-202ENST00000579007 VWDEQ8N2E2 1590 aa7.65□□□□□ -1.18
GAPLINC-202ENST00000579007 CFDP1Q9UEE9 299 aaPredicted RBP7.65□□□□□ -1.18
GAPLINC-202ENST00000579007 ALKQ9UM73 1620 aa7.65□□□□□ -1.18
GAPLINC-202ENST00000579007 PTPN23Q9H3S7 1636 aa7.64□□□□□ -1.19
GAPLINC-202ENST00000579007 PLCD3Q8N3E9 789 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms