RNA–Protein interactions for RNA: ENST00000578664.1

GAPLINC-201, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-201ENST00000578664 SLC34A2O95436 690 aa6.77□□□□□ -1.33
GAPLINC-201ENST00000578664 CDK11BP21127 795 aaKnown RBP6.77□□□□□ -1.33
GAPLINC-201ENST00000578664 OXER1Q8TDS5 423 aa6.77□□□□□ -1.33
GAPLINC-201ENST00000578664 SCUBE2Q9NQ36 999 aa6.77□□□□□ -1.33
GAPLINC-201ENST00000578664 CDK11AQ9UQ88 783 aaPredicted RBP6.77□□□□□ -1.33
GAPLINC-201ENST00000578664 PLEKHG3A1L390 1219 aa6.76□□□□□ -1.33
GAPLINC-201ENST00000578664 GPIHBP1Q8IV16 184 aa6.76□□□□□ -1.33
GAPLINC-201ENST00000578664 OTUD5Q96G74 571 aa6.76□□□□□ -1.33
GAPLINC-201ENST00000578664 GZF1Q9H116 711 aaPredicted RBP6.76□□□□□ -1.33
GAPLINC-201ENST00000578664 RBM25P49756 843 aaKnown RBP6.75□□□□□ -1.33
GAPLINC-201ENST00000578664 LHX8Q68G74 356 aa6.75□□□□□ -1.33
GAPLINC-201ENST00000578664 SLAIN1Q8ND83 568 aa6.75□□□□□ -1.33
GAPLINC-201ENST00000578664 PTCD2Q8WV60 388 aaKnown RBP6.75□□□□□ -1.33
GAPLINC-201ENST00000578664 CLUAP1Q96AJ1 413 aa6.75□□□□□ -1.33
GAPLINC-201ENST00000578664 DPYSL4O14531 572 aa6.74□□□□□ -1.33
GAPLINC-201ENST00000578664 HOXB3P14651 431 aaPredicted RBP6.73□□□□□ -1.33
GAPLINC-201ENST00000578664 PDE4CQ08493 712 aa6.73□□□□□ -1.33
GAPLINC-201ENST00000578664 PDIA6Q15084 440 aa6.73□□□□□ -1.33
GAPLINC-201ENST00000578664 SPDYE16A6NNV3 312 aaPredicted RBP6.72□□□□□ -1.33
GAPLINC-201ENST00000578664 PATL2C9JE40 543 aaKnown RBP6.72□□□□□ -1.33
GAPLINC-201ENST00000578664 RBM26Q5T8P6 1007 aaKnown RBP6.72□□□□□ -1.33
GAPLINC-201ENST00000578664 FOXD4L5Q5VV16 416 aaPredicted RBP6.72□□□□□ -1.33
GAPLINC-201ENST00000578664 FOXD4L4Q8WXT5 416 aaPredicted RBP6.72□□□□□ -1.33
GAPLINC-201ENST00000578664 CCDC97Q96F63 343 aaPredicted RBP6.72□□□□□ -1.33
GAPLINC-201ENST00000578664 KDM4FA0A1W2PPD8 638 aa6.71□□□□□ -1.34
GAPLINC-201ENST00000578664 ZNF777Q9ULD5 760 aaPredicted RBP6.71□□□□□ -1.34
GAPLINC-201ENST00000578664 FNBP4Q8N3X1 1017 aaPredicted RBP6.7□□□□□ -1.34
GAPLINC-201ENST00000578664 UPF1Q92900 1129 aaKnown RBP eCLIP6.7□□□□□ -1.34
GAPLINC-201ENST00000578664 AMOTL2Q9Y2J4 779 aa6.7□□□□□ -1.34
GAPLINC-201ENST00000578664 MAP3K9P80192 1104 aa6.69□□□□□ -1.34
GAPLINC-201ENST00000578664 ZNF428Q96B54 188 aa6.69□□□□□ -1.34
GAPLINC-201ENST00000578664 ANO8Q9HCE9 1232 aaPredicted RBP6.69□□□□□ -1.34
GAPLINC-201ENST00000578664 PCDHGA4Q9Y5G9 962 aa6.69□□□□□ -1.34
GAPLINC-201ENST00000578664 TBC1D12O60347 775 aa6.68□□□□□ -1.34
GAPLINC-201ENST00000578664 PTGER2P43116 358 aa6.68□□□□□ -1.34
GAPLINC-201ENST00000578664 DOK7Q18PE1 504 aa6.68□□□□□ -1.34
GAPLINC-201ENST00000578664 PROSER2Q86WR7 435 aaPredicted RBP6.68□□□□□ -1.34
GAPLINC-201ENST00000578664 RETREG2Q8NC44 543 aa6.68□□□□□ -1.34
GAPLINC-201ENST00000578664 ZSWIM6Q9HCJ5 1215 aa6.68□□□□□ -1.34
GAPLINC-201ENST00000578664 MINK1Q8N4C8 1332 aaPredicted RBP6.68□□□□□ -1.34
GAPLINC-201ENST00000578664 PPP1R15AO75807 674 aaPredicted RBP6.67□□□□□ -1.34
GAPLINC-201ENST00000578664 IRF5Q13568 498 aa6.67□□□□□ -1.34
GAPLINC-201ENST00000578664 FBXW7Q969H0 707 aa6.67□□□□□ -1.34
GAPLINC-201ENST00000578664 EVI5O60447 810 aa6.66□□□□□ -1.34
GAPLINC-201ENST00000578664 MLLT3P42568 568 aaPredicted RBP6.66□□□□□ -1.34
GAPLINC-201ENST00000578664 MCM6Q14566 821 aa6.66□□□□□ -1.34
GAPLINC-201ENST00000578664 AMHR2Q16671 573 aa6.66□□□□□ -1.34
GAPLINC-201ENST00000578664 GPR153Q6NV75 609 aa6.66□□□□□ -1.34
GAPLINC-201ENST00000578664 SNPHO15079 494 aa6.65□□□□□ -1.34
GAPLINC-201ENST00000578664 PCMTD1Q96MG8 357 aaPredicted RBP6.65□□□□□ -1.34
GAPLINC-201ENST00000578664 RSPH4AQ5TD94 716 aa6.64□□□□□ -1.35
GAPLINC-201ENST00000578664 ACIN1Q9UKV3 1341 aaKnown RBP6.64□□□□□ -1.35
GAPLINC-201ENST00000578664 RIMBP2O15034 1052 aa6.63□□□□□ -1.35
GAPLINC-201ENST00000578664 ARSIQ5FYB1 569 aa6.63□□□□□ -1.35
GAPLINC-201ENST00000578664 PLSCR2Q9NRY7 297 aa6.63□□□□□ -1.35
GAPLINC-201ENST00000578664 NISCHQ9Y2I1 1504 aa6.62□□□□□ -1.35
GAPLINC-201ENST00000578664 PARP9Q8IXQ6 854 aa6.62□□□□□ -1.35
GAPLINC-201ENST00000578664 IRF6O14896 467 aa6.61□□□□□ -1.35
GAPLINC-201ENST00000578664 HOXB1P14653 301 aaPredicted RBP6.61□□□□□ -1.35
GAPLINC-201ENST00000578664 OSBPP22059 807 aa6.61□□□□□ -1.35
GAPLINC-201ENST00000578664 KCNA1Q09470 495 aa6.61□□□□□ -1.35
GAPLINC-201ENST00000578664 KHSRPQ92945 711 aaKnown RBP eCLIP6.61□□□□□ -1.35
GAPLINC-201ENST00000578664 ZNF710Q8N1W2 664 aa6.6□□□□□ -1.35
GAPLINC-201ENST00000578664 PHF14O94880 888 aa6.59□□□□□ -1.35
GAPLINC-201ENST00000578664 NUDT7P0C024 238 aa6.59□□□□□ -1.35
GAPLINC-201ENST00000578664 PRIM1P49642 420 aaKnown RBP6.59□□□□□ -1.35
GAPLINC-201ENST00000578664 MAP2K5Q13163 448 aa6.59□□□□□ -1.35
GAPLINC-201ENST00000578664 DDX12PQ92771 950 aa6.59□□□□□ -1.35
GAPLINC-201ENST00000578664 USP35Q9P2H5 1018 aa6.59□□□□□ -1.35
GAPLINC-201ENST00000578664 GRXCR2A6NFK2 248 aa6.58□□□□□ -1.36
GAPLINC-201ENST00000578664 GPR37O15354 613 aa6.58□□□□□ -1.36
GAPLINC-201ENST00000578664 BRD1O95696 1058 aa6.58□□□□□ -1.36
GAPLINC-201ENST00000578664 FOSBP53539 338 aa6.58□□□□□ -1.36
GAPLINC-201ENST00000578664 JPH4Q96JJ6 628 aa6.58□□□□□ -1.36
GAPLINC-201ENST00000578664 PCDHGA10Q9Y5H3 936 aa6.58□□□□□ -1.36
GAPLINC-201ENST00000578664 CCDC102AQ96A19 550 aa6.57□□□□□ -1.36
GAPLINC-201ENST00000578664 EPAS1Q99814 870 aa6.57□□□□□ -1.36
GAPLINC-201ENST00000578664 ST18O60284 1047 aa6.56□□□□□ -1.36
GAPLINC-201ENST00000578664 SH3D19Q5HYK7 790 aa6.56□□□□□ -1.36
GAPLINC-201ENST00000578664 POM121Q96HA1 1249 aa6.56□□□□□ -1.36
GAPLINC-201ENST00000578664 LHX6Q9UPM6 363 aa6.56□□□□□ -1.36
GAPLINC-201ENST00000578664 LCE2DQ5TA82 110 aaPredicted RBP6.55□□□□□ -1.36
GAPLINC-201ENST00000578664 EN1Q05925 392 aaPredicted RBP6.54□□□□□ -1.36
GAPLINC-201ENST00000578664 TYW1BQ6NUM6 668 aa6.54□□□□□ -1.36
GAPLINC-201ENST00000578664 CHMP4AQ9BY43 222 aa6.54□□□□□ -1.36
GAPLINC-201ENST00000578664 ZNF330Q9Y3S2 320 aaPredicted RBP6.54□□□□□ -1.36
GAPLINC-201ENST00000578664 PSDA5PKW4 1024 aaPredicted RBP6.53□□□□□ -1.36
GAPLINC-201ENST00000578664 SKIV2LQ15477 1246 aaKnown RBP6.53□□□□□ -1.36
GAPLINC-201ENST00000578664 CCDC27Q2M243 656 aa6.53□□□□□ -1.36
GAPLINC-201ENST00000578664 FAM177A1Q8N128 213 aaPredicted RBP6.53□□□□□ -1.36
GAPLINC-201ENST00000578664 SPDYE5A6NIY4 337 aa6.52□□□□□ -1.37
GAPLINC-201ENST00000578664 CANXP27824 592 aaKnown RBP6.52□□□□□ -1.37
GAPLINC-201ENST00000578664 ZNF454Q8N9F8 522 aa6.52□□□□□ -1.37
GAPLINC-201ENST00000578664 ZDHHC16Q969W1 377 aa6.52□□□□□ -1.37
GAPLINC-201ENST00000578664 IGSF5Q9NSI5 407 aa6.52□□□□□ -1.37
GAPLINC-201ENST00000578664 COG6Q9Y2V7 657 aa6.52□□□□□ -1.37
GAPLINC-201ENST00000578664 ADAM33Q9BZ11 813 aa6.51□□□□□ -1.37
GAPLINC-201ENST00000578664 NPDC1Q9NQX5 325 aaPredicted RBP6.51□□□□□ -1.37
GAPLINC-201ENST00000578664 USTQ9Y2C2 406 aa6.51□□□□□ -1.37
GAPLINC-201ENST00000578664 GNPATO15228 680 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms