RNA–Protein interactions for RNA: ENST00000578431.1

EPB41L3-210, Transcript of erythrocyte membrane protein band 4.1 like 3, human

TSL 2

Gene EPB41L3, Length 570 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EPB41L3-210	ENST00000578431	PPP6R1	Q9UPN7	881 aa		43.75	■■■■■ 4.59
EPB41L3-210	ENST00000578431	DEPDC5	O75140	1603 aa		43.71	■■■■■ 4.59
EPB41L3-210	ENST00000578431	AEBP2	Q6ZN18	517 aa	Predicted RBP	43.71	■■■■■ 4.59
EPB41L3-210	ENST00000578431	MROH1	Q8NDA8	1641 aa		43.7	■■■■■ 4.59
EPB41L3-210	ENST00000578431	ITGAE	P38570	1179 aa		43.69	■■■■■ 4.58
EPB41L3-210	ENST00000578431	GGT6	Q6P531	493 aa		43.69	■■■■■ 4.58
EPB41L3-210	ENST00000578431	CLTC	Q00610	1675 aa	Known RBP	43.68	■■■■■ 4.58
EPB41L3-210	ENST00000578431	PRDM15	P57071	1507 aa	Predicted RBP	43.67	■■■■■ 4.58
EPB41L3-210	ENST00000578431	KDM5D	Q9BY66	1539 aa		43.66	■■■■■ 4.58
EPB41L3-210	ENST00000578431	ANKRD50	Q9ULJ7	1429 aa		43.65	■■■■■ 4.58
EPB41L3-210	ENST00000578431	ZC3H13	Q5T200	1668 aa	Known RBP	43.65	■■■■■ 4.58
EPB41L3-210	ENST00000578431	C3	P01024	1663 aa		43.63	■■■■■ 4.58
EPB41L3-210	ENST00000578431	ESF1	Q9H501	851 aa	Known RBP	43.63	■■■■■ 4.57
EPB41L3-210	ENST00000578431	GCC2	Q8IWJ2	1684 aa		43.58	■■■■■ 4.57
EPB41L3-210	ENST00000578431	ABCC3	O15438	1527 aa		43.53	■■■■■ 4.56
EPB41L3-210	ENST00000578431	UNC13B	O14795	1591 aa		43.5	■■■■■ 4.55
EPB41L3-210	ENST00000578431	VWDE	Q8N2E2	1590 aa		43.5	■■■■■ 4.55
EPB41L3-210	ENST00000578431	HFM1	A2PYH4	1435 aa		43.49	■■■■■ 4.55
EPB41L3-210	ENST00000578431	ZMYM3	Q14202	1370 aa		43.49	■■■■■ 4.55
EPB41L3-210	ENST00000578431	CEP152	O94986	1710 aa		43.48	■■■■■ 4.55
EPB41L3-210	ENST00000578431	NAIP	Q13075	1403 aa		43.48	■■■■■ 4.55
EPB41L3-210	ENST00000578431	WASHC2C	Q9Y4E1	1318 aa		43.48	■■■■■ 4.55
EPB41L3-210	ENST00000578431	CAMSAP1	Q5T5Y3	1602 aa		43.43	■■■■■ 4.54
EPB41L3-210	ENST00000578431	LMTK2	Q8IWU2	1503 aa		43.43	■■■■■ 4.54
EPB41L3-210	ENST00000578431	KANK1	Q14678	1352 aa		43.41	■■■■■ 4.54
EPB41L3-210	ENST00000578431	NPAT	Q14207	1427 aa		43.4	■■■■■ 4.54
EPB41L3-210	ENST00000578431	CEBPA	P49715	358 aa	Predicted RBP	43.4	■■■■■ 4.54
EPB41L3-210	ENST00000578431	PZP	P20742	1482 aa		43.39	■■■■■ 4.54
EPB41L3-210	ENST00000578431	PREX1	Q8TCU6	1659 aa		43.35	■■■■■ 4.53
EPB41L3-210	ENST00000578431	SETD1B	Q9UPS6	1966 aa	Known RBP	43.35	■■■■■ 4.53
EPB41L3-210	ENST00000578431	ARHGAP31	Q2M1Z3	1444 aa		43.31	■■■■■ 4.52
EPB41L3-210	ENST00000578431	IQGAP3	Q86VI3	1631 aa		43.31	■■■■■ 4.52
EPB41L3-210	ENST00000578431	PLPPR3	Q6T4P5	718 aa		43.31	■■■■■ 4.52
EPB41L3-210	ENST00000578431	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	43.31	■■■■■ 4.52
EPB41L3-210	ENST00000578431	EFCAB6	Q5THR3	1501 aa		43.27	■■■■■ 4.52
EPB41L3-210	ENST00000578431	TET3	O43151	1660 aa		43.26	■■■■■ 4.52
EPB41L3-210	ENST00000578431	LMTK3	Q96Q04	1460 aa		43.24	■■■■■ 4.51
EPB41L3-210	ENST00000578431	SPATA31D1	Q6ZQQ2	1576 aa		43.22	■■■■■ 4.51
EPB41L3-210	ENST00000578431	MYO3A	Q8NEV4	1616 aa		43.2	■■■■■ 4.51
EPB41L3-210	ENST00000578431	UHRF1BP1	Q6BDS2	1440 aa		43.19	■■■■■ 4.5
EPB41L3-210	ENST00000578431	ERVK-7	P63135	1459 aa		43.17	■■■■■ 4.5
EPB41L3-210	ENST00000578431	ZNF142	P52746	1687 aa	Predicted RBP	43.16	■■■■■ 4.5
EPB41L3-210	ENST00000578431	NUP155	O75694	1391 aa		43.16	■■■■■ 4.5
EPB41L3-210	ENST00000578431	RPRD2	Q5VT52	1461 aa	Known RBP	43.15	■■■■■ 4.5
EPB41L3-210	ENST00000578431	FBXO31	Q5XUX0	539 aa	Predicted RBP	43.11	■■■■■ 4.49
EPB41L3-210	ENST00000578431	TNR	Q92752	1358 aa		43.11	■■■■■ 4.49
EPB41L3-210	ENST00000578431	SETD5	Q9C0A6	1442 aa		43.1	■■■■■ 4.49
EPB41L3-210	ENST00000578431		E9PCH4	1651 aa		43.07	■■■■■ 4.49
EPB41L3-210	ENST00000578431	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	43.06	■■■■■ 4.48
EPB41L3-210	ENST00000578431	CFAP65	Q6ZU64	1925 aa	Known RBP	43.05	■■■■■ 4.48
EPB41L3-210	ENST00000578431	NLRP1	Q9C000	1473 aa		43.05	■■■■■ 4.48
EPB41L3-210	ENST00000578431	ACIN1	Q9UKV3	1341 aa	Known RBP	43.03	■■■■■ 4.48
EPB41L3-210	ENST00000578431	NOS1	P29475	1434 aa		43.01	■■■■■ 4.48
EPB41L3-210	ENST00000578431	A2ML1	A8K2U0	1454 aa		43	■■■■■ 4.47
EPB41L3-210	ENST00000578431	SYNM	O15061	1565 aa		42.97	■■■■■ 4.47
EPB41L3-210	ENST00000578431	RAB3GAP2	Q9H2M9	1393 aa		42.95	■■■■■ 4.47
EPB41L3-210	ENST00000578431	TRIM52	Q96A61	297 aa		42.9	■■■■■ 4.46
EPB41L3-210	ENST00000578431	SPHKAP	Q2M3C7	1700 aa		42.85	■■■■■ 4.45
EPB41L3-210	ENST00000578431	UGGT1	Q9NYU2	1555 aa		42.85	■■■■■ 4.45
EPB41L3-210	ENST00000578431	KDM5A	P29375	1690 aa	Known RBP	42.85	■■■■■ 4.45
EPB41L3-210	ENST00000578431	PIK3C2B	O00750	1634 aa		42.84	■■■■■ 4.45
EPB41L3-210	ENST00000578431	HRC	P23327	699 aa		42.84	■■■■■ 4.45
EPB41L3-210	ENST00000578431	HSPA2	P54652	639 aa		42.84	■■■■■ 4.45
EPB41L3-210	ENST00000578431	UBR1	Q8IWV7	1749 aa		42.82	■■■■■ 4.44
EPB41L3-210	ENST00000578431	TRIM26	Q12899	539 aa	Predicted RBP	42.81	■■■■■ 4.44
EPB41L3-210	ENST00000578431	PLA2R1	Q13018	1463 aa		42.81	■■■■■ 4.44
EPB41L3-210	ENST00000578431	PTPRT	O14522	1441 aa		42.8	■■■■■ 4.44
EPB41L3-210	ENST00000578431	SLC4A1AP	Q9BWU0	796 aa	Known RBP	42.78	■■■■■ 4.44
EPB41L3-210	ENST00000578431	SLC52A1	Q9NWF4	448 aa		42.77	■■■■■ 4.44
EPB41L3-210	ENST00000578431	STRC	Q7RTU9	1775 aa		42.75	■■■■■ 4.43
EPB41L3-210	ENST00000578431	TRPM2	O94759	1503 aa		42.73	■■■■■ 4.43
EPB41L3-210	ENST00000578431	ADGRB3	O60242	1522 aa		42.72	■■■■■ 4.43
EPB41L3-210	ENST00000578431	PKD2	Q13563	968 aa		42.71	■■■■■ 4.43
EPB41L3-210	ENST00000578431	IDI1	Q13907	227 aa		42.69	■■■■■ 4.42
EPB41L3-210	ENST00000578431	THEMIS	Q8N1K5	641 aa	Predicted RBP	42.68	■■■■■ 4.42
EPB41L3-210	ENST00000578431	MPHOSPH9	Q99550	1183 aa		42.68	■■■■■ 4.42
EPB41L3-210	ENST00000578431	POLR1A	O95602	1720 aa	Predicted RBP	42.65	■■■■■ 4.42
EPB41L3-210	ENST00000578431	SLIT1	O75093	1534 aa		42.62	■■■■■ 4.41
EPB41L3-210	ENST00000578431	TMEM131L	A2VDJ0	1609 aa		42.62	■■■■■ 4.41
EPB41L3-210	ENST00000578431	ARHGAP23	Q9P227	1491 aa		42.61	■■■■■ 4.41
EPB41L3-210	ENST00000578431	CLTCL1	P53675	1640 aa		42.6	■■■■■ 4.41
EPB41L3-210	ENST00000578431	MYO5B	Q9ULV0	1848 aa		42.56	■■■■■ 4.4
EPB41L3-210	ENST00000578431	NEURL4	Q96JN8	1562 aa		42.53	■■■■■ 4.4
EPB41L3-210	ENST00000578431	STAG3	Q9UJ98	1225 aa		42.53	■■■■■ 4.4
EPB41L3-210	ENST00000578431	TMEM2	Q9UHN6	1383 aa		42.51	■■■■■ 4.4
EPB41L3-210	ENST00000578431	KIF1B	O60333	1816 aa		42.48	■■■■■ 4.39
EPB41L3-210	ENST00000578431	DMRT2	Q9Y5R5	561 aa		42.48	■■■■■ 4.39
EPB41L3-210	ENST00000578431	MED14	O60244	1454 aa		42.48	■■■■■ 4.39
EPB41L3-210	ENST00000578431	FOXD1	Q16676	465 aa		42.47	■■■■■ 4.39
EPB41L3-210	ENST00000578431	ANKLE2	Q86XL3	938 aa		42.46	■■■■■ 4.39
EPB41L3-210	ENST00000578431	SCAF11	Q99590	1463 aa	Known RBP	42.45	■■■■■ 4.39
EPB41L3-210	ENST00000578431	NCKAP5L	Q9HCH0	1330 aa		42.45	■■■■■ 4.39
EPB41L3-210	ENST00000578431	CCDC144A	A2RUR9	1427 aa		42.4	■■■■■ 4.38
EPB41L3-210	ENST00000578431	ZFYVE9	O95405	1425 aa		42.4	■■■■■ 4.38
EPB41L3-210	ENST00000578431	IQGAP1	P46940	1657 aa		42.38	■■■■■ 4.38
EPB41L3-210	ENST00000578431	NPHP4	O75161	1426 aa	Predicted RBP	42.35	■■■■■ 4.37
EPB41L3-210	ENST00000578431	CHGA	P10645	457 aa	Known RBP	42.34	■■■■■ 4.37
EPB41L3-210	ENST00000578431	EID1	Q9Y6B2	187 aa		42.34	■■■■■ 4.37
EPB41L3-210	ENST00000578431	RIMS2	Q9UQ26	1411 aa		42.33	■■■■■ 4.37
EPB41L3-210	ENST00000578431	LTK	P29376	864 aa		42.32	■■■■■ 4.37

Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms