RNA–Protein interactions for RNA: ENST00000577335.1

SCO1-202, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 3

Gene SCO1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-202ENST00000577335 ROCK1Q13464 1354 aa29.84■■■□□ 2.37
SCO1-202ENST00000577335 PTPRKQ15262 1439 aa29.82■■■□□ 2.36
SCO1-202ENST00000577335 RNF17Q9BXT8 1623 aaKnown RBP29.78■■■□□ 2.36
SCO1-202ENST00000577335 ZMYM3Q14202 1370 aa29.77■■■□□ 2.36
SCO1-202ENST00000577335 MROH2AA6NES4 1674 aa29.76■■■□□ 2.36
SCO1-202ENST00000577335 WASHC2CQ9Y4E1 1318 aa29.75■■■□□ 2.35
SCO1-202ENST00000577335 ITGAEP38570 1179 aa29.75■■■□□ 2.35
SCO1-202ENST00000577335 CEBPAP49715 358 aaPredicted RBP29.75■■■□□ 2.35
SCO1-202ENST00000577335 KDM5DQ9BY66 1539 aa29.74■■■□□ 2.35
SCO1-202ENST00000577335 ANKRD50Q9ULJ7 1429 aa29.72■■■□□ 2.35
SCO1-202ENST00000577335 PLPPR3Q6T4P5 718 aa29.72■■■□□ 2.35
SCO1-202ENST00000577335 CLTCQ00610 1675 aaKnown RBP29.69■■■□□ 2.34
SCO1-202ENST00000577335 NPATQ14207 1427 aa29.69■■■□□ 2.34
SCO1-202ENST00000577335 C3P01024 1663 aa29.68■■■□□ 2.34
SCO1-202ENST00000577335 MROH1Q8NDA8 1641 aa29.67■■■□□ 2.34
SCO1-202ENST00000577335 PRDM15P57071 1507 aaPredicted RBP29.66■■■□□ 2.34
SCO1-202ENST00000577335 KANK1Q14678 1352 aa29.65■■■□□ 2.34
SCO1-202ENST00000577335 ABCC3O15438 1527 aa29.64■■■□□ 2.34
SCO1-202ENST00000577335 DEPDC5O75140 1603 aa29.63■■■□□ 2.33
SCO1-202ENST00000577335 ZC3H13Q5T200 1668 aaKnown RBP29.63■■■□□ 2.33
SCO1-202ENST00000577335 PZPP20742 1482 aa29.61■■■□□ 2.33
SCO1-202ENST00000577335 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.6■■■□□ 2.333e-7■□□□□ 9.7
SCO1-202ENST00000577335 LMTK3Q96Q04 1460 aa29.6■■■□□ 2.33
SCO1-202ENST00000577335 SETD1BQ9UPS6 1966 aaKnown RBP29.58■■■□□ 2.33
SCO1-202ENST00000577335 UHRF1BP1Q6BDS2 1440 aa29.57■■■□□ 2.32
SCO1-202ENST00000577335 VWDEQ8N2E2 1590 aa29.56■■■□□ 2.32
SCO1-202ENST00000577335 LMTK2Q8IWU2 1503 aa29.55■■■□□ 2.32
SCO1-202ENST00000577335 ARHGAP31Q2M1Z3 1444 aa29.54■■■□□ 2.32
SCO1-202ENST00000577335 PREX1Q8TCU6 1659 aa29.54■■■□□ 2.32
SCO1-202ENST00000577335 HFM1A2PYH4 1435 aa29.53■■■□□ 2.32
SCO1-202ENST00000577335 NAIPQ13075 1403 aa29.53■■■□□ 2.32
SCO1-202ENST00000577335 FBXO31Q5XUX0 539 aaPredicted RBP29.5■■■□□ 2.31
SCO1-202ENST00000577335 TNRQ92752 1358 aa29.49■■■□□ 2.31
SCO1-202ENST00000577335 UNC13BO14795 1591 aa29.48■■■□□ 2.31
SCO1-202ENST00000577335 CAMSAP1Q5T5Y3 1602 aa29.48■■■□□ 2.31
SCO1-202ENST00000577335 CEP152O94986 1710 aa29.46■■■□□ 2.31
SCO1-202ENST00000577335 GCC2Q8IWJ2 1684 aa29.43■■■□□ 2.3
SCO1-202ENST00000577335 SPATA31D1Q6ZQQ2 1576 aa29.43■■■□□ 2.3
SCO1-202ENST00000577335 ERVK-7P63135 1459 aa29.42■■■□□ 2.3
SCO1-202ENST00000577335 NUP155O75694 1391 aa29.42■■■□□ 2.3
SCO1-202ENST00000577335 HSPA2P54652 639 aa29.42■■■□□ 2.3
SCO1-202ENST00000577335 NLRP1Q9C000 1473 aa29.41■■■□□ 2.3
SCO1-202ENST00000577335 EFCAB6Q5THR3 1501 aa29.4■■■□□ 2.3
SCO1-202ENST00000577335 MYO3AQ8NEV4 1616 aa29.39■■■□□ 2.3
SCO1-202ENST00000577335 RPRD2Q5VT52 1461 aaKnown RBP29.39■■■□□ 2.3
SCO1-202ENST00000577335 A2ML1A8K2U0 1454 aa29.38■■■□□ 2.29
SCO1-202ENST00000577335 ACIN1Q9UKV3 1341 aaKnown RBP29.37■■■□□ 2.29
SCO1-202ENST00000577335 CEP170BQ9Y4F5 1589 aaPredicted RBP29.36■■■□□ 2.29
SCO1-202ENST00000577335 IQGAP3Q86VI3 1631 aa29.36■■■□□ 2.29
SCO1-202ENST00000577335 TET3O43151 1660 aa29.35■■■□□ 2.29
SCO1-202ENST00000577335 ZNF142P52746 1687 aaPredicted RBP29.35■■■□□ 2.29
SCO1-202ENST00000577335 NOS1P29475 1434 aa29.31■■■□□ 2.28
SCO1-202ENST00000577335 THEMISQ8N1K5 641 aaPredicted RBP29.28■■■□□ 2.28
SCO1-202ENST00000577335 PLA2R1Q13018 1463 aa29.27■■■□□ 2.28
SCO1-202ENST00000577335 SETD5Q9C0A6 1442 aa29.27■■■□□ 2.28
SCO1-202ENST00000577335 TRIM52Q96A61 297 aa29.26■■■□□ 2.27
SCO1-202ENST00000577335 SLC52A1Q9NWF4 448 aa29.26■■■□□ 2.27
SCO1-202ENST00000577335 DMRT2Q9Y5R5 561 aa29.26■■■□□ 2.27
SCO1-202ENST00000577335 UGGT1Q9NYU2 1555 aa29.24■■■□□ 2.27
SCO1-202ENST00000577335 PKD2Q13563 968 aa29.21■■■□□ 2.27
SCO1-202ENST00000577335 E9PCH4 1651 aa29.19■■■□□ 2.26
SCO1-202ENST00000577335 SYNMO15061 1565 aa29.19■■■□□ 2.26
SCO1-202ENST00000577335 IDI1Q13907 227 aa29.19■■■□□ 2.26
SCO1-202ENST00000577335 CFAP65Q6ZU64 1925 aaKnown RBP29.18■■■□□ 2.26
SCO1-202ENST00000577335 SLC4A1APQ9BWU0 796 aaKnown RBP29.17■■■□□ 2.26
SCO1-202ENST00000577335 HRCP23327 699 aa29.16■■■□□ 2.26
SCO1-202ENST00000577335 PTPRTO14522 1441 aa29.15■■■□□ 2.26
SCO1-202ENST00000577335 STRCQ7RTU9 1775 aa29.14■■■□□ 2.26
SCO1-202ENST00000577335 STAG3Q9UJ98 1225 aa29.14■■■□□ 2.26
SCO1-202ENST00000577335 RAB3GAP2Q9H2M9 1393 aa29.13■■■□□ 2.25
SCO1-202ENST00000577335 ANKLE2Q86XL3 938 aa29.13■■■□□ 2.25
SCO1-202ENST00000577335 KDM5AP29375 1690 aaKnown RBP29.12■■■□□ 2.25
SCO1-202ENST00000577335 NCKAP5LQ9HCH0 1330 aa29.11■■■□□ 2.25
SCO1-202ENST00000577335 UBR1Q8IWV7 1749 aa29.1■■■□□ 2.25
SCO1-202ENST00000577335 PIK3C2BO00750 1634 aa29.09■■■□□ 2.25
SCO1-202ENST00000577335 MPHOSPH9Q99550 1183 aa29.08■■■□□ 2.25
SCO1-202ENST00000577335 ADGRB3O60242 1522 aa29.06■■■□□ 2.24
SCO1-202ENST00000577335 SLIT1O75093 1534 aa29.06■■■□□ 2.24
SCO1-202ENST00000577335 ARHGAP23Q9P227 1491 aa29.06■■■□□ 2.24
SCO1-202ENST00000577335 TMEM2Q9UHN6 1383 aa29.05■■■□□ 2.24
SCO1-202ENST00000577335 EID1Q9Y6B2 187 aa29.03■■■□□ 2.24
SCO1-202ENST00000577335 MED14O60244 1454 aa29.03■■■□□ 2.24
SCO1-202ENST00000577335 TRPM2O94759 1503 aa29.01■■■□□ 2.23
SCO1-202ENST00000577335 SPHKAPQ2M3C7 1700 aa29.01■■■□□ 2.23
SCO1-202ENST00000577335 SCAF11Q99590 1463 aaKnown RBP28.99■■■□□ 2.23
SCO1-202ENST00000577335 HDGFP51858 240 aaKnown RBP28.99■■■□□ 2.23
SCO1-202ENST00000577335 TXNDC2Q86VQ3 553 aa28.99■■■□□ 2.23
SCO1-202ENST00000577335 TRIM26Q12899 539 aaPredicted RBP28.98■■■□□ 2.23
SCO1-202ENST00000577335 POLR1AO95602 1720 aaPredicted RBP28.97■■■□□ 2.23
SCO1-202ENST00000577335 NEURL4Q96JN8 1562 aa28.97■■■□□ 2.23
SCO1-202ENST00000577335 NPHP4O75161 1426 aaPredicted RBP28.97■■■□□ 2.23
SCO1-202ENST00000577335 TMEM131LA2VDJ0 1609 aa28.97■■■□□ 2.23
SCO1-202ENST00000577335 CHGAP10645 457 aaKnown RBP28.96■■■□□ 2.23
SCO1-202ENST00000577335 LTKP29376 864 aa28.95■■■□□ 2.22
SCO1-202ENST00000577335 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.92■■■□□ 2.22
SCO1-202ENST00000577335 FOXD1Q16676 465 aa28.91■■■□□ 2.22
SCO1-202ENST00000577335 ZFYVE9O95405 1425 aa28.9■■■□□ 2.22
SCO1-202ENST00000577335 RIMS2Q9UQ26 1411 aa28.89■■■□□ 2.22
SCO1-202ENST00000577335 CLTCL1P53675 1640 aa28.89■■■□□ 2.22
SCO1-202ENST00000577335 CCDC144AA2RUR9 1427 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms