RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 TNRQ92752 1358 aa16.37■□□□□ 0.21
NPLOC4-220ENST00000576940 ADGBQ8N7X0 1667 aa16.37■□□□□ 0.21
NPLOC4-220ENST00000576940 ANKLE2Q86XL3 938 aa16.36■□□□□ 0.21
NPLOC4-220ENST00000576940 WASHC2CQ9Y4E1 1318 aa16.36■□□□□ 0.21
NPLOC4-220ENST00000576940 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.36■□□□□ 0.21
NPLOC4-220ENST00000576940 SHANK2Q9UPX8 1470 aa16.35■□□□□ 0.21
NPLOC4-220ENST00000576940 RTEL1-TNFRSF6BF6WH68 1400 aa16.35■□□□□ 0.21
NPLOC4-220ENST00000576940 THEMISQ8N1K5 641 aaPredicted RBP16.34■□□□□ 0.21
NPLOC4-220ENST00000576940 SENP3Q9H4L4 574 aaPredicted RBP16.33■□□□□ 0.2
NPLOC4-220ENST00000576940 TIAM1Q13009 1591 aa16.33■□□□□ 0.2
NPLOC4-220ENST00000576940 NEURL4Q96JN8 1562 aa16.32■□□□□ 0.2
NPLOC4-220ENST00000576940 MED1Q15648 1581 aaPredicted RBP16.31■□□□□ 0.2
NPLOC4-220ENST00000576940 CPS1P31327 1500 aa16.31■□□□□ 0.2
NPLOC4-220ENST00000576940 MIA2Q96PC5 1412 aa16.3■□□□□ 0.2
NPLOC4-220ENST00000576940 PZPP20742 1482 aa16.29■□□□□ 0.2
NPLOC4-220ENST00000576940 POLR1AO95602 1720 aaPredicted RBP16.29■□□□□ 0.2
NPLOC4-220ENST00000576940 RSPH4AQ5TD94 716 aa16.28■□□□□ 0.2
NPLOC4-220ENST00000576940 PHF23Q9BUL5 403 aaPredicted RBP16.28■□□□□ 0.2
NPLOC4-220ENST00000576940 NPHP4O75161 1426 aaPredicted RBP16.28■□□□□ 0.2
NPLOC4-220ENST00000576940 VWDEQ8N2E2 1590 aa16.27■□□□□ 0.2
NPLOC4-220ENST00000576940 CEP162Q5TB80 1403 aa16.27■□□□□ 0.19
NPLOC4-220ENST00000576940 KDM5DQ9BY66 1539 aa16.26■□□□□ 0.19
NPLOC4-220ENST00000576940 TSPY4P0CV99 314 aa16.26■□□□□ 0.19
NPLOC4-220ENST00000576940 TSPY10P0CW01 314 aa16.26■□□□□ 0.19
NPLOC4-220ENST00000576940 UGGT1Q9NYU2 1555 aa16.26■□□□□ 0.19
NPLOC4-220ENST00000576940 EHBP1L1Q8N3D4 1523 aa16.25■□□□□ 0.19
NPLOC4-220ENST00000576940 CCDC141Q6ZP82 1450 aa16.25■□□□□ 0.19
NPLOC4-220ENST00000576940 ALKQ9UM73 1620 aa16.25■□□□□ 0.19
NPLOC4-220ENST00000576940 MED14O60244 1454 aa16.24■□□□□ 0.19
NPLOC4-220ENST00000576940 FAM135AQ9P2D6 1515 aa16.24■□□□□ 0.19
NPLOC4-220ENST00000576940 CAMSAP2Q08AD1 1489 aa16.23■□□□□ 0.19
NPLOC4-220ENST00000576940 NLRP1Q9C000 1473 aa16.23■□□□□ 0.19
NPLOC4-220ENST00000576940 NCOA2Q15596 1464 aa16.22■□□□□ 0.19
NPLOC4-220ENST00000576940 STRCP1A6NGW2 1772 aa16.2■□□□□ 0.18
NPLOC4-220ENST00000576940 LRRC7Q96NW7 1537 aa16.19■□□□□ 0.18
NPLOC4-220ENST00000576940 DEPDC5O75140 1603 aa16.19■□□□□ 0.18
NPLOC4-220ENST00000576940 IQGAP1P46940 1657 aa16.18■□□□□ 0.18
NPLOC4-220ENST00000576940 RGS17Q9UGC6 210 aaPredicted RBP16.17■□□□□ 0.18
NPLOC4-220ENST00000576940 LTKP29376 864 aa16.16■□□□□ 0.18
NPLOC4-220ENST00000576940 CFAP65Q6ZU64 1925 aaKnown RBP16.15■□□□□ 0.18
NPLOC4-220ENST00000576940 TXNDC2Q86VQ3 553 aa16.15■□□□□ 0.18
NPLOC4-220ENST00000576940 ABCC3O15438 1527 aa16.14■□□□□ 0.18
NPLOC4-220ENST00000576940 ARHGEF5Q12774 1597 aa16.14■□□□□ 0.17
NPLOC4-220ENST00000576940 ERVK-7P63135 1459 aa16.13■□□□□ 0.17
NPLOC4-220ENST00000576940 RNF17Q9BXT8 1623 aaKnown RBP16.1■□□□□ 0.17
NPLOC4-220ENST00000576940 KANK4Q5T7N3 995 aaPredicted RBP16.1■□□□□ 0.17
NPLOC4-220ENST00000576940 ZC3H13Q5T200 1668 aaKnown RBP16.09■□□□□ 0.17
NPLOC4-220ENST00000576940 SCAF11Q99590 1463 aaKnown RBP16.09■□□□□ 0.17
NPLOC4-220ENST00000576940 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.08■□□□□ 0.166e-8■■□□□ 14.5
NPLOC4-220ENST00000576940 UBR1Q8IWV7 1749 aa16.08■□□□□ 0.16
NPLOC4-220ENST00000576940 RBM33Q96EV2 1170 aaKnown RBP16.07■□□□□ 0.16
NPLOC4-220ENST00000576940 EID1Q9Y6B2 187 aa16.07■□□□□ 0.16
NPLOC4-220ENST00000576940 MROH1Q8NDA8 1641 aa16.07■□□□□ 0.16
NPLOC4-220ENST00000576940 CEP152O94986 1710 aa16.06■□□□□ 0.16
NPLOC4-220ENST00000576940 SYNMO15061 1565 aa16.06■□□□□ 0.16
NPLOC4-220ENST00000576940 MAST1Q9Y2H9 1570 aa16.06■□□□□ 0.16
NPLOC4-220ENST00000576940 LRRC9Q6ZRR7 1453 aa16.06■□□□□ 0.16
NPLOC4-220ENST00000576940 POTEAQ6S8J7 498 aa16.05■□□□□ 0.16
NPLOC4-220ENST00000576940 RRP7BPQ9NSQ0 103 aa16.05■□□□□ 0.16
NPLOC4-220ENST00000576940 STAG3Q9UJ98 1225 aa16.05■□□□□ 0.16
NPLOC4-220ENST00000576940 ARHGAP23Q9P227 1491 aa16.04■□□□□ 0.16
NPLOC4-220ENST00000576940 XIRP1Q702N8 1843 aaKnown RBP16.04■□□□□ 0.16
NPLOC4-220ENST00000576940 LOC105371045A0A1W2PR82 267 aa16.03■□□□□ 0.16
NPLOC4-220ENST00000576940 SLC26A8Q96RN1 970 aa16.03■□□□□ 0.16
NPLOC4-220ENST00000576940 EIF2AK4Q9P2K8 1649 aaKnown RBP16.03■□□□□ 0.16
NPLOC4-220ENST00000576940 SLIT1O75093 1534 aa16.03■□□□□ 0.16
NPLOC4-220ENST00000576940 FAM135BQ49AJ0 1406 aa16.02■□□□□ 0.16
NPLOC4-220ENST00000576940 IDI1Q13907 227 aa16.02■□□□□ 0.16
NPLOC4-220ENST00000576940 TMEM94Q12767 1356 aa16.01■□□□□ 0.15
NPLOC4-220ENST00000576940 TMEM2Q9UHN6 1383 aa16.01■□□□□ 0.15
NPLOC4-220ENST00000576940 DUOX2Q9NRD8 1548 aa16.01■□□□□ 0.15
NPLOC4-220ENST00000576940 KCNA6P17658 529 aa16.01■□□□□ 0.15
NPLOC4-220ENST00000576940 PROSER2Q86WR7 435 aaPredicted RBP16.01■□□□□ 0.15
NPLOC4-220ENST00000576940 ARHGAP31Q2M1Z3 1444 aa16.01■□□□□ 0.15
NPLOC4-220ENST00000576940 MYOM3Q5VTT5 1437 aa16.01■□□□□ 0.15
NPLOC4-220ENST00000576940 KIF15Q9NS87 1388 aa16■□□□□ 0.15
NPLOC4-220ENST00000576940 VPS8Q8N3P4 1428 aa15.98■□□□□ 0.15
NPLOC4-220ENST00000576940 PIK3C2BO00750 1634 aa15.97■□□□□ 0.15
NPLOC4-220ENST00000576940 ABCC5O15440 1437 aa15.97■□□□□ 0.15
NPLOC4-220ENST00000576940 BCANQ96GW7 911 aa15.96■□□□□ 0.15
NPLOC4-220ENST00000576940 CHIC2Q9UKJ5 165 aa15.96■□□□□ 0.15
NPLOC4-220ENST00000576940 ERBINQ96RT1 1412 aa15.94■□□□□ 0.14
NPLOC4-220ENST00000576940 PRDM15P57071 1507 aaPredicted RBP15.94■□□□□ 0.14
NPLOC4-220ENST00000576940 KANK1Q14678 1352 aa15.94■□□□□ 0.14
NPLOC4-220ENST00000576940 ROBO1Q9Y6N7 1651 aa15.93■□□□□ 0.14
NPLOC4-220ENST00000576940 SLAIN2Q9P270 581 aa15.93■□□□□ 0.14
NPLOC4-220ENST00000576940 TET3O43151 1660 aa15.92■□□□□ 0.14
NPLOC4-220ENST00000576940 EFCAB6Q5THR3 1501 aa15.92■□□□□ 0.14
NPLOC4-220ENST00000576940 MAP3K1Q13233 1512 aa15.91■□□□□ 0.14
NPLOC4-220ENST00000576940 DAPK1P53355 1430 aa15.89■□□□□ 0.13
NPLOC4-220ENST00000576940 MSH6P52701 1360 aa15.88■□□□□ 0.13
NPLOC4-220ENST00000576940 SLC52A1Q9NWF4 448 aa15.88■□□□□ 0.13
NPLOC4-220ENST00000576940 PTPN23Q9H3S7 1636 aa15.87■□□□□ 0.13
NPLOC4-220ENST00000576940 NOS1P29475 1434 aa15.87■□□□□ 0.13
NPLOC4-220ENST00000576940 LMTK2Q8IWU2 1503 aa15.86■□□□□ 0.13
NPLOC4-220ENST00000576940 ANKRD30AQ9BXX3 1397 aa15.86■□□□□ 0.13
NPLOC4-220ENST00000576940 JCADQ9P266 1359 aa15.86■□□□□ 0.13
NPLOC4-220ENST00000576940 APLP2Q06481 763 aa15.85■□□□□ 0.13
NPLOC4-220ENST00000576940 CROCC2H7BZ55 1655 aa15.85■□□□□ 0.13
NPLOC4-220ENST00000576940 KDM5AP29375 1690 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms