RNA–Protein interactions for RNA: ENST00000575836.1

TNFRSF12A-207, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 3

Gene TNFRSF12A, Length 161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-207ENST00000575836 PTPRKQ15262 1439 aa23.44■■□□□ 1.34
TNFRSF12A-207ENST00000575836 PLPPR3Q6T4P5 718 aa23.44■■□□□ 1.34
TNFRSF12A-207ENST00000575836 ROCK1Q13464 1354 aa23.42■■□□□ 1.34
TNFRSF12A-207ENST00000575836 FAM135AQ9P2D6 1515 aa23.39■■□□□ 1.34
TNFRSF12A-207ENST00000575836 RNF17Q9BXT8 1623 aaKnown RBP23.38■■□□□ 1.33
TNFRSF12A-207ENST00000575836 WASHC2CQ9Y4E1 1318 aa23.37■■□□□ 1.33
TNFRSF12A-207ENST00000575836 CEBPAP49715 358 aaPredicted RBP23.37■■□□□ 1.33
TNFRSF12A-207ENST00000575836 MROH2AA6NES4 1674 aa23.37■■□□□ 1.33
TNFRSF12A-207ENST00000575836 ZMYM3Q14202 1370 aa23.37■■□□□ 1.33
TNFRSF12A-207ENST00000575836 ANKRD50Q9ULJ7 1429 aa23.36■■□□□ 1.33
TNFRSF12A-207ENST00000575836 CLTCQ00610 1675 aaKnown RBP23.36■■□□□ 1.33
TNFRSF12A-207ENST00000575836 KDM5DQ9BY66 1539 aa23.36■■□□□ 1.33
TNFRSF12A-207ENST00000575836 C3P01024 1663 aa23.33■■□□□ 1.33
TNFRSF12A-207ENST00000575836 KANK1Q14678 1352 aa23.31■■□□□ 1.32
TNFRSF12A-207ENST00000575836 MROH1Q8NDA8 1641 aa23.3■■□□□ 1.32
TNFRSF12A-207ENST00000575836 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.3■■□□□ 1.32
TNFRSF12A-207ENST00000575836 PRDM15P57071 1507 aaPredicted RBP23.29■■□□□ 1.32
TNFRSF12A-207ENST00000575836 DEPDC5O75140 1603 aa23.29■■□□□ 1.32
TNFRSF12A-207ENST00000575836 ZC3H13Q5T200 1668 aaKnown RBP23.28■■□□□ 1.32
TNFRSF12A-207ENST00000575836 ABCC3O15438 1527 aa23.28■■□□□ 1.32
TNFRSF12A-207ENST00000575836 NPATQ14207 1427 aa23.27■■□□□ 1.32
TNFRSF12A-207ENST00000575836 SETD1BQ9UPS6 1966 aaKnown RBP23.25■■□□□ 1.31
TNFRSF12A-207ENST00000575836 PZPP20742 1482 aa23.24■■□□□ 1.31
TNFRSF12A-207ENST00000575836 UHRF1BP1Q6BDS2 1440 aa23.22■■□□□ 1.31
TNFRSF12A-207ENST00000575836 PREX1Q8TCU6 1659 aa23.21■■□□□ 1.31
TNFRSF12A-207ENST00000575836 CEP152O94986 1710 aa23.21■■□□□ 1.31
TNFRSF12A-207ENST00000575836 LMTK3Q96Q04 1460 aa23.2■■□□□ 1.3
TNFRSF12A-207ENST00000575836 HFM1A2PYH4 1435 aa23.2■■□□□ 1.3
TNFRSF12A-207ENST00000575836 NAIPQ13075 1403 aa23.2■■□□□ 1.3
TNFRSF12A-207ENST00000575836 VWDEQ8N2E2 1590 aa23.19■■□□□ 1.3
TNFRSF12A-207ENST00000575836 CAMSAP1Q5T5Y3 1602 aa23.19■■□□□ 1.3
TNFRSF12A-207ENST00000575836 LMTK2Q8IWU2 1503 aa23.18■■□□□ 1.3
TNFRSF12A-207ENST00000575836 UNC13BO14795 1591 aa23.18■■□□□ 1.3
TNFRSF12A-207ENST00000575836 GCC2Q8IWJ2 1684 aa23.17■■□□□ 1.3
TNFRSF12A-207ENST00000575836 FBXO31Q5XUX0 539 aaPredicted RBP23.17■■□□□ 1.3
TNFRSF12A-207ENST00000575836 ARHGAP31Q2M1Z3 1444 aa23.16■■□□□ 1.3
TNFRSF12A-207ENST00000575836 TNRQ92752 1358 aa23.15■■□□□ 1.3
TNFRSF12A-207ENST00000575836 NUP155O75694 1391 aa23.14■■□□□ 1.29
TNFRSF12A-207ENST00000575836 HSPA2P54652 639 aa23.11■■□□□ 1.29
TNFRSF12A-207ENST00000575836 MYO3AQ8NEV4 1616 aa23.11■■□□□ 1.29
TNFRSF12A-207ENST00000575836 ERVK-7P63135 1459 aa23.11■■□□□ 1.29
TNFRSF12A-207ENST00000575836 SPATA31D1Q6ZQQ2 1576 aa23.1■■□□□ 1.29
TNFRSF12A-207ENST00000575836 EFCAB6Q5THR3 1501 aa23.1■■□□□ 1.29
TNFRSF12A-207ENST00000575836 IQGAP3Q86VI3 1631 aa23.08■■□□□ 1.29
TNFRSF12A-207ENST00000575836 TET3O43151 1660 aa23.08■■□□□ 1.29
TNFRSF12A-207ENST00000575836 RPRD2Q5VT52 1461 aaKnown RBP23.07■■□□□ 1.28
TNFRSF12A-207ENST00000575836 CEP170BQ9Y4F5 1589 aaPredicted RBP23.06■■□□□ 1.28
TNFRSF12A-207ENST00000575836 NLRP1Q9C000 1473 aa23.06■■□□□ 1.28
TNFRSF12A-207ENST00000575836 A2ML1A8K2U0 1454 aa23.05■■□□□ 1.28
TNFRSF12A-207ENST00000575836 TRIM52Q96A61 297 aa23.05■■□□□ 1.28
TNFRSF12A-207ENST00000575836 CFAP65Q6ZU64 1925 aaKnown RBP23.05■■□□□ 1.28
TNFRSF12A-207ENST00000575836 ZNF142P52746 1687 aaPredicted RBP23.05■■□□□ 1.28
TNFRSF12A-207ENST00000575836 ACIN1Q9UKV3 1341 aaKnown RBP23.03■■□□□ 1.28
TNFRSF12A-207ENST00000575836 SETD5Q9C0A6 1442 aa23.02■■□□□ 1.28
TNFRSF12A-207ENST00000575836 NOS1P29475 1434 aa23■■□□□ 1.27
TNFRSF12A-207ENST00000575836 THEMISQ8N1K5 641 aaPredicted RBP22.97■■□□□ 1.27
TNFRSF12A-207ENST00000575836 UGGT1Q9NYU2 1555 aa22.97■■□□□ 1.27
TNFRSF12A-207ENST00000575836 E9PCH4 1651 aa22.97■■□□□ 1.27
TNFRSF12A-207ENST00000575836 SLC52A1Q9NWF4 448 aa22.96■■□□□ 1.27
TNFRSF12A-207ENST00000575836 PLA2R1Q13018 1463 aa22.95■■□□□ 1.26
TNFRSF12A-207ENST00000575836 SYNMO15061 1565 aa22.94■■□□□ 1.26
TNFRSF12A-207ENST00000575836 SLC4A1APQ9BWU0 796 aaKnown RBP22.94■■□□□ 1.26
TNFRSF12A-207ENST00000575836 RAB3GAP2Q9H2M9 1393 aa22.93■■□□□ 1.26
TNFRSF12A-207ENST00000575836 STAG3Q9UJ98 1225 aa22.93■■□□□ 1.26
TNFRSF12A-207ENST00000575836 DMRT2Q9Y5R5 561 aa22.93■■□□□ 1.26
TNFRSF12A-207ENST00000575836 IDI1Q13907 227 aa22.92■■□□□ 1.26
TNFRSF12A-207ENST00000575836 PKD2Q13563 968 aa22.91■■□□□ 1.26
TNFRSF12A-207ENST00000575836 PIK3C2BO00750 1634 aa22.89■■□□□ 1.25
TNFRSF12A-207ENST00000575836 STRCQ7RTU9 1775 aa22.89■■□□□ 1.25
TNFRSF12A-207ENST00000575836 UBR1Q8IWV7 1749 aa22.88■■□□□ 1.25
TNFRSF12A-207ENST00000575836 HRCP23327 699 aa22.87■■□□□ 1.25
TNFRSF12A-207ENST00000575836 ANKLE2Q86XL3 938 aa22.87■■□□□ 1.25
TNFRSF12A-207ENST00000575836 MPHOSPH9Q99550 1183 aa22.87■■□□□ 1.25
TNFRSF12A-207ENST00000575836 NCKAP5LQ9HCH0 1330 aa22.86■■□□□ 1.25
TNFRSF12A-207ENST00000575836 PTPRTO14522 1441 aa22.86■■□□□ 1.25
TNFRSF12A-207ENST00000575836 KDM5AP29375 1690 aaKnown RBP22.85■■□□□ 1.25
TNFRSF12A-207ENST00000575836 SPHKAPQ2M3C7 1700 aa22.84■■□□□ 1.25
TNFRSF12A-207ENST00000575836 ADGRB3O60242 1522 aa22.83■■□□□ 1.25
TNFRSF12A-207ENST00000575836 TRIM26Q12899 539 aaPredicted RBP22.83■■□□□ 1.25
TNFRSF12A-207ENST00000575836 CHGAP10645 457 aaKnown RBP22.81■■□□□ 1.24
TNFRSF12A-207ENST00000575836 TMEM2Q9UHN6 1383 aa22.8■■□□□ 1.24
TNFRSF12A-207ENST00000575836 EID1Q9Y6B2 187 aa22.8■■□□□ 1.24
TNFRSF12A-207ENST00000575836 SLIT1O75093 1534 aa22.8■■□□□ 1.24
TNFRSF12A-207ENST00000575836 TRPM2O94759 1503 aa22.8■■□□□ 1.24
TNFRSF12A-207ENST00000575836 POLR1AO95602 1720 aaPredicted RBP22.79■■□□□ 1.24
TNFRSF12A-207ENST00000575836 ARHGAP23Q9P227 1491 aa22.79■■□□□ 1.24
TNFRSF12A-207ENST00000575836 TXNDC2Q86VQ3 553 aa22.78■■□□□ 1.24
TNFRSF12A-207ENST00000575836 FOXD1Q16676 465 aa22.77■■□□□ 1.24
TNFRSF12A-207ENST00000575836 SCAF11Q99590 1463 aaKnown RBP22.77■■□□□ 1.24
TNFRSF12A-207ENST00000575836 TMEM131LA2VDJ0 1609 aa22.76■■□□□ 1.23
TNFRSF12A-207ENST00000575836 HDGFP51858 240 aaKnown RBP22.76■■□□□ 1.23
TNFRSF12A-207ENST00000575836 NPHP4O75161 1426 aaPredicted RBP22.75■■□□□ 1.23
TNFRSF12A-207ENST00000575836 NEURL4Q96JN8 1562 aa22.75■■□□□ 1.23
TNFRSF12A-207ENST00000575836 MED14O60244 1454 aa22.74■■□□□ 1.23
TNFRSF12A-207ENST00000575836 LTKP29376 864 aa22.73■■□□□ 1.23
TNFRSF12A-207ENST00000575836 CLTCL1P53675 1640 aa22.72■■□□□ 1.23
TNFRSF12A-207ENST00000575836 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.7■■□□□ 1.22
TNFRSF12A-207ENST00000575836 CCDC144AA2RUR9 1427 aa22.7■■□□□ 1.22
TNFRSF12A-207ENST00000575836 RIMS2Q9UQ26 1411 aa22.7■■□□□ 1.22
TNFRSF12A-207ENST00000575836 MYO5BQ9ULV0 1848 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms