RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 CLTCQ00610 1675 aaKnown RBP23.09■■□□□ 1.29
LITAF-217ENST00000575426 ERBINQ96RT1 1412 aa23.08■■□□□ 1.29
LITAF-217ENST00000575426 MROH2AA6NES4 1674 aa23.08■■□□□ 1.29
LITAF-217ENST00000575426 PTPRKQ15262 1439 aa23.08■■□□□ 1.28
LITAF-217ENST00000575426 C3P01024 1663 aa23.06■■□□□ 1.28
LITAF-217ENST00000575426 ROCK1Q13464 1354 aa23.05■■□□□ 1.28
LITAF-217ENST00000575426 RNF17Q9BXT8 1623 aaKnown RBP23.05■■□□□ 1.28
LITAF-217ENST00000575426 WASHC2CQ9Y4E1 1318 aa23.04■■□□□ 1.28
LITAF-217ENST00000575426 SETD1BQ9UPS6 1966 aaKnown RBP23.03■■□□□ 1.28
LITAF-217ENST00000575426 CEBPAP49715 358 aaPredicted RBP23.03■■□□□ 1.28
LITAF-217ENST00000575426 FAM135AQ9P2D6 1515 aa23.02■■□□□ 1.28
LITAF-217ENST00000575426 KDM5DQ9BY66 1539 aa23.01■■□□□ 1.27
LITAF-217ENST00000575426 ZMYM3Q14202 1370 aa23.01■■□□□ 1.27
LITAF-217ENST00000575426 ANKRD50Q9ULJ7 1429 aa23■■□□□ 1.27
LITAF-217ENST00000575426 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.99■■□□□ 1.27
LITAF-217ENST00000575426 ZC3H13Q5T200 1668 aaKnown RBP22.99■■□□□ 1.27
LITAF-217ENST00000575426 KANK1Q14678 1352 aa22.98■■□□□ 1.27
LITAF-217ENST00000575426 CEP152O94986 1710 aa22.96■■□□□ 1.27
LITAF-217ENST00000575426 DEPDC5O75140 1603 aa22.96■■□□□ 1.27
LITAF-217ENST00000575426 MROH1Q8NDA8 1641 aa22.96■■□□□ 1.27
LITAF-217ENST00000575426 CFAP65Q6ZU64 1925 aaKnown RBP22.94■■□□□ 1.26
LITAF-217ENST00000575426 PREX1Q8TCU6 1659 aa22.93■■□□□ 1.26
LITAF-217ENST00000575426 PRDM15P57071 1507 aaPredicted RBP22.93■■□□□ 1.26
LITAF-217ENST00000575426 ABCC3O15438 1527 aa22.92■■□□□ 1.26
LITAF-217ENST00000575426 GCC2Q8IWJ2 1684 aa22.9■■□□□ 1.26
LITAF-217ENST00000575426 NPATQ14207 1427 aa22.9■■□□□ 1.26
LITAF-217ENST00000575426 CAMSAP1Q5T5Y3 1602 aa22.9■■□□□ 1.26
LITAF-217ENST00000575426 PZPP20742 1482 aa22.87■■□□□ 1.25
LITAF-217ENST00000575426 UHRF1BP1Q6BDS2 1440 aa22.87■■□□□ 1.25
LITAF-217ENST00000575426 UNC13BO14795 1591 aa22.86■■□□□ 1.25
LITAF-217ENST00000575426 NAIPQ13075 1403 aa22.84■■□□□ 1.25
LITAF-217ENST00000575426 VWDEQ8N2E2 1590 aa22.84■■□□□ 1.25
LITAF-217ENST00000575426 FBXO31Q5XUX0 539 aaPredicted RBP22.83■■□□□ 1.25
LITAF-217ENST00000575426 LMTK3Q96Q04 1460 aa22.83■■□□□ 1.25
LITAF-217ENST00000575426 HFM1A2PYH4 1435 aa22.82■■□□□ 1.24
LITAF-217ENST00000575426 LMTK2Q8IWU2 1503 aa22.82■■□□□ 1.24
LITAF-217ENST00000575426 NUP155O75694 1391 aa22.79■■□□□ 1.24
LITAF-217ENST00000575426 TNRQ92752 1358 aa22.79■■□□□ 1.24
LITAF-217ENST00000575426 TET3O43151 1660 aa22.79■■□□□ 1.24
LITAF-217ENST00000575426 ARHGAP31Q2M1Z3 1444 aa22.79■■□□□ 1.24
LITAF-217ENST00000575426 MYO3AQ8NEV4 1616 aa22.79■■□□□ 1.24
LITAF-217ENST00000575426 IQGAP3Q86VI3 1631 aa22.78■■□□□ 1.24
LITAF-217ENST00000575426 HSPA2P54652 639 aa22.76■■□□□ 1.23
LITAF-217ENST00000575426 EFCAB6Q5THR3 1501 aa22.76■■□□□ 1.23
LITAF-217ENST00000575426 ERVK-7P63135 1459 aa22.75■■□□□ 1.23
LITAF-217ENST00000575426 TRIM52Q96A61 297 aa22.75■■□□□ 1.23
LITAF-217ENST00000575426 SPATA31D1Q6ZQQ2 1576 aa22.75■■□□□ 1.23
LITAF-217ENST00000575426 ZNF142P52746 1687 aaPredicted RBP22.74■■□□□ 1.23
LITAF-217ENST00000575426 CEP170BQ9Y4F5 1589 aaPredicted RBP22.72■■□□□ 1.23
LITAF-217ENST00000575426 A2ML1A8K2U0 1454 aa22.71■■□□□ 1.23
LITAF-217ENST00000575426 RPRD2Q5VT52 1461 aaKnown RBP22.71■■□□□ 1.23
LITAF-217ENST00000575426 NLRP1Q9C000 1473 aa22.71■■□□□ 1.23
LITAF-217ENST00000575426 E9PCH4 1651 aa22.7■■□□□ 1.22
LITAF-217ENST00000575426 SETD5Q9C0A6 1442 aa22.69■■□□□ 1.22
LITAF-217ENST00000575426 ACIN1Q9UKV3 1341 aaKnown RBP22.69■■□□□ 1.22
LITAF-217ENST00000575426 UGGT1Q9NYU2 1555 aa22.64■■□□□ 1.22
LITAF-217ENST00000575426 THEMISQ8N1K5 641 aaPredicted RBP22.64■■□□□ 1.21
LITAF-217ENST00000575426 STAG3Q9UJ98 1225 aa22.63■■□□□ 1.21
LITAF-217ENST00000575426 NOS1P29475 1434 aa22.63■■□□□ 1.21
LITAF-217ENST00000575426 SLC4A1APQ9BWU0 796 aaKnown RBP22.62■■□□□ 1.21
LITAF-217ENST00000575426 STRCQ7RTU9 1775 aa22.62■■□□□ 1.21
LITAF-217ENST00000575426 SYNMO15061 1565 aa22.61■■□□□ 1.21
LITAF-217ENST00000575426 SLC52A1Q9NWF4 448 aa22.61■■□□□ 1.21
LITAF-217ENST00000575426 DMRT2Q9Y5R5 561 aa22.6■■□□□ 1.21
LITAF-217ENST00000575426 PIK3C2BO00750 1634 aa22.6■■□□□ 1.21
LITAF-217ENST00000575426 SPHKAPQ2M3C7 1700 aa22.6■■□□□ 1.21
LITAF-217ENST00000575426 UBR1Q8IWV7 1749 aa22.6■■□□□ 1.21
LITAF-217ENST00000575426 IDI1Q13907 227 aa22.59■■□□□ 1.21
LITAF-217ENST00000575426 RAB3GAP2Q9H2M9 1393 aa22.59■■□□□ 1.21
LITAF-217ENST00000575426 PLA2R1Q13018 1463 aa22.58■■□□□ 1.2
LITAF-217ENST00000575426 PKD2Q13563 968 aa22.57■■□□□ 1.2
LITAF-217ENST00000575426 KDM5AP29375 1690 aaKnown RBP22.56■■□□□ 1.2
LITAF-217ENST00000575426 POLR1AO95602 1720 aaPredicted RBP22.55■■□□□ 1.2
LITAF-217ENST00000575426 ANKLE2Q86XL3 938 aa22.54■■□□□ 1.2
LITAF-217ENST00000575426 NCKAP5LQ9HCH0 1330 aa22.54■■□□□ 1.2
LITAF-217ENST00000575426 HRCP23327 699 aa22.53■■□□□ 1.2
LITAF-217ENST00000575426 TRIM26Q12899 539 aaPredicted RBP22.53■■□□□ 1.2
LITAF-217ENST00000575426 MPHOSPH9Q99550 1183 aa22.53■■□□□ 1.2
LITAF-217ENST00000575426 MYO5BQ9ULV0 1848 aa22.52■■□□□ 1.2
LITAF-217ENST00000575426 CHGAP10645 457 aaKnown RBP22.52■■□□□ 1.2
LITAF-217ENST00000575426 ADGRB3O60242 1522 aa22.5■■□□□ 1.19
LITAF-217ENST00000575426 PTPRTO14522 1441 aa22.49■■□□□ 1.19
LITAF-217ENST00000575426 EID1Q9Y6B2 187 aa22.49■■□□□ 1.19
LITAF-217ENST00000575426 KIF1BO60333 1816 aa22.48■■□□□ 1.19
LITAF-217ENST00000575426 TRPM2O94759 1503 aa22.46■■□□□ 1.19
LITAF-217ENST00000575426 TMEM131LA2VDJ0 1609 aa22.46■■□□□ 1.19
LITAF-217ENST00000575426 FOXD1Q16676 465 aa22.45■■□□□ 1.18
LITAF-217ENST00000575426 TXNDC2Q86VQ3 553 aa22.45■■□□□ 1.18
LITAF-217ENST00000575426 SLIT1O75093 1534 aa22.45■■□□□ 1.18
LITAF-217ENST00000575426 HDGFP51858 240 aaKnown RBP22.44■■□□□ 1.18
LITAF-217ENST00000575426 TMEM2Q9UHN6 1383 aa22.44■■□□□ 1.18
LITAF-217ENST00000575426 CLTCL1P53675 1640 aa22.42■■□□□ 1.18
LITAF-217ENST00000575426 ARHGAP23Q9P227 1491 aa22.42■■□□□ 1.18
LITAF-217ENST00000575426 SCAF11Q99590 1463 aaKnown RBP22.41■■□□□ 1.18
LITAF-217ENST00000575426 NEURL4Q96JN8 1562 aa22.41■■□□□ 1.18
LITAF-217ENST00000575426 IQGAP1P46940 1657 aa22.4■■□□□ 1.18
LITAF-217ENST00000575426 NPHP4O75161 1426 aaPredicted RBP22.4■■□□□ 1.18
LITAF-217ENST00000575426 LTKP29376 864 aa22.39■■□□□ 1.17
LITAF-217ENST00000575426 ZNF326Q5BKZ1 582 aaKnown RBP22.39■■□□□ 1.17
LITAF-217ENST00000575426 MED14O60244 1454 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms