RNA–Protein interactions for RNA: ENST00000575313.1

CLDN7-208, Transcript of claudin 7, humanhuman

TSL 3

Gene CLDN7, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-208ENST00000575313 ITGAEP38570 1179 aa27.12■■□□□ 1.93
CLDN7-208ENST00000575313 CNTLNQ9NXG0 1405 aa27.12■■□□□ 1.93
CLDN7-208ENST00000575313 RNF17Q9BXT8 1623 aaKnown RBP27.07■■□□□ 1.92
CLDN7-208ENST00000575313 FAM135AQ9P2D6 1515 aa27.06■■□□□ 1.92
CLDN7-208ENST00000575313 ANKRD50Q9ULJ7 1429 aa27.03■■□□□ 1.92
CLDN7-208ENST00000575313 MROH2AA6NES4 1674 aa27.02■■□□□ 1.92
CLDN7-208ENST00000575313 TRIM26Q12899 539 aaPredicted RBP27.01■■□□□ 1.91
CLDN7-208ENST00000575313 KDM5DQ9BY66 1539 aa27■■□□□ 1.91
CLDN7-208ENST00000575313 CLTCQ00610 1675 aaKnown RBP27■■□□□ 1.91
CLDN7-208ENST00000575313 WASHC2CQ9Y4E1 1318 aa26.99■■□□□ 1.91
CLDN7-208ENST00000575313 ZMYM3Q14202 1370 aa26.97■■□□□ 1.91
CLDN7-208ENST00000575313 PLPPR3Q6T4P5 718 aa26.97■■□□□ 1.91
CLDN7-208ENST00000575313 MROH1Q8NDA8 1641 aa26.97■■□□□ 1.91
CLDN7-208ENST00000575313 PRDM15P57071 1507 aaPredicted RBP26.96■■□□□ 1.91
CLDN7-208ENST00000575313 C3P01024 1663 aa26.96■■□□□ 1.91
CLDN7-208ENST00000575313 CEBPAP49715 358 aaPredicted RBP26.96■■□□□ 1.91
CLDN7-208ENST00000575313 DEPDC5O75140 1603 aa26.96■■□□□ 1.91
CLDN7-208ENST00000575313 ZC3H13Q5T200 1668 aaKnown RBP26.95■■□□□ 1.9
CLDN7-208ENST00000575313 KANK1Q14678 1352 aa26.94■■□□□ 1.9
CLDN7-208ENST00000575313 ABCC3O15438 1527 aa26.92■■□□□ 1.9
CLDN7-208ENST00000575313 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.9■■□□□ 1.9
CLDN7-208ENST00000575313 NPATQ14207 1427 aa26.89■■□□□ 1.89
CLDN7-208ENST00000575313 HFM1A2PYH4 1435 aa26.88■■□□□ 1.89
CLDN7-208ENST00000575313 NAIPQ13075 1403 aa26.88■■□□□ 1.89
CLDN7-208ENST00000575313 PZPP20742 1482 aa26.86■■□□□ 1.89
CLDN7-208ENST00000575313 GCC2Q8IWJ2 1684 aa26.85■■□□□ 1.89
CLDN7-208ENST00000575313 VWDEQ8N2E2 1590 aa26.85■■□□□ 1.89
CLDN7-208ENST00000575313 UNC13BO14795 1591 aa26.84■■□□□ 1.89
CLDN7-208ENST00000575313 CEP152O94986 1710 aa26.84■■□□□ 1.89
CLDN7-208ENST00000575313 LMTK2Q8IWU2 1503 aa26.83■■□□□ 1.89
CLDN7-208ENST00000575313 CAMSAP1Q5T5Y3 1602 aa26.83■■□□□ 1.88
CLDN7-208ENST00000575313 SETD1BQ9UPS6 1966 aaKnown RBP26.82■■□□□ 1.88
CLDN7-208ENST00000575313 PREX1Q8TCU6 1659 aa26.81■■□□□ 1.88
CLDN7-208ENST00000575313 ARHGAP31Q2M1Z3 1444 aa26.8■■□□□ 1.88
CLDN7-208ENST00000575313 PCGF6Q9BYE7 350 aa26.78■■□□□ 1.88
CLDN7-208ENST00000575313 UHRF1BP1Q6BDS2 1440 aa26.78■■□□□ 1.88
CLDN7-208ENST00000575313 LMTK3Q96Q04 1460 aa26.78■■□□□ 1.88
CLDN7-208ENST00000575313 NUP155O75694 1391 aa26.75■■□□□ 1.87
CLDN7-208ENST00000575313 FBXO31Q5XUX0 539 aaPredicted RBP26.75■■□□□ 1.87
CLDN7-208ENST00000575313 EFCAB6Q5THR3 1501 aa26.74■■□□□ 1.87
CLDN7-208ENST00000575313 TNRQ92752 1358 aa26.73■■□□□ 1.87
CLDN7-208ENST00000575313 IQGAP3Q86VI3 1631 aa26.73■■□□□ 1.87
CLDN7-208ENST00000575313 ERVK-7P63135 1459 aa26.72■■□□□ 1.87
CLDN7-208ENST00000575313 TET3O43151 1660 aa26.72■■□□□ 1.87
CLDN7-208ENST00000575313 SPATA31D1Q6ZQQ2 1576 aa26.71■■□□□ 1.87
CLDN7-208ENST00000575313 RPRD2Q5VT52 1461 aaKnown RBP26.69■■□□□ 1.86
CLDN7-208ENST00000575313 MYO3AQ8NEV4 1616 aa26.69■■□□□ 1.86
CLDN7-208ENST00000575313 ACIN1Q9UKV3 1341 aaKnown RBP26.66■■□□□ 1.86
CLDN7-208ENST00000575313 SETD5Q9C0A6 1442 aa26.66■■□□□ 1.86
CLDN7-208ENST00000575313 NLRP1Q9C000 1473 aa26.66■■□□□ 1.86
CLDN7-208ENST00000575313 ZNF142P52746 1687 aaPredicted RBP26.64■■□□□ 1.86
CLDN7-208ENST00000575313 CEP170BQ9Y4F5 1589 aaPredicted RBP26.64■■□□□ 1.86
CLDN7-208ENST00000575313 TRIM52Q96A61 297 aa26.64■■□□□ 1.86
CLDN7-208ENST00000575313 A2ML1A8K2U0 1454 aa26.63■■□□□ 1.85
CLDN7-208ENST00000575313 HSPA2P54652 639 aa26.63■■□□□ 1.85
CLDN7-208ENST00000575313 CFAP65Q6ZU64 1925 aaKnown RBP26.61■■□□□ 1.85
CLDN7-208ENST00000575313 NOS1P29475 1434 aa26.6■■□□□ 1.85
CLDN7-208ENST00000575313 E9PCH4 1651 aa26.58■■□□□ 1.85
CLDN7-208ENST00000575313 RAB3GAP2Q9H2M9 1393 aa26.56■■□□□ 1.84
CLDN7-208ENST00000575313 SYNMO15061 1565 aa26.54■■□□□ 1.84
CLDN7-208ENST00000575313 SLC4A1APQ9BWU0 796 aaKnown RBP26.53■■□□□ 1.84
CLDN7-208ENST00000575313 SLC52A1Q9NWF4 448 aa26.53■■□□□ 1.84
CLDN7-208ENST00000575313 UGGT1Q9NYU2 1555 aa26.53■■□□□ 1.84
CLDN7-208ENST00000575313 HRCP23327 699 aa26.51■■□□□ 1.83
CLDN7-208ENST00000575313 THEMISQ8N1K5 641 aaPredicted RBP26.51■■□□□ 1.83
CLDN7-208ENST00000575313 PLA2R1Q13018 1463 aa26.5■■□□□ 1.83
CLDN7-208ENST00000575313 PKD2Q13563 968 aa26.48■■□□□ 1.83
CLDN7-208ENST00000575313 IDI1Q13907 227 aa26.48■■□□□ 1.83
CLDN7-208ENST00000575313 PTPRTO14522 1441 aa26.47■■□□□ 1.83
CLDN7-208ENST00000575313 PIK3C2BO00750 1634 aa26.46■■□□□ 1.83
CLDN7-208ENST00000575313 UBR1Q8IWV7 1749 aa26.45■■□□□ 1.83
CLDN7-208ENST00000575313 MPHOSPH9Q99550 1183 aa26.45■■□□□ 1.82
CLDN7-208ENST00000575313 STAG3Q9UJ98 1225 aa26.45■■□□□ 1.82
CLDN7-208ENST00000575313 KDM5AP29375 1690 aaKnown RBP26.44■■□□□ 1.82
CLDN7-208ENST00000575313 SPHKAPQ2M3C7 1700 aa26.44■■□□□ 1.82
CLDN7-208ENST00000575313 DMRT2Q9Y5R5 561 aa26.43■■□□□ 1.82
CLDN7-208ENST00000575313 STRCQ7RTU9 1775 aa26.43■■□□□ 1.82
CLDN7-208ENST00000575313 ADGRB3O60242 1522 aa26.41■■□□□ 1.82
CLDN7-208ENST00000575313 TRPM2O94759 1503 aa26.39■■□□□ 1.82
CLDN7-208ENST00000575313 ANKLE2Q86XL3 938 aa26.38■■□□□ 1.81
CLDN7-208ENST00000575313 NCKAP5LQ9HCH0 1330 aa26.38■■□□□ 1.81
CLDN7-208ENST00000575313 SLIT1O75093 1534 aa26.36■■□□□ 1.81
CLDN7-208ENST00000575313 ARHGAP23Q9P227 1491 aa26.36■■□□□ 1.81
CLDN7-208ENST00000575313 TMEM2Q9UHN6 1383 aa26.34■■□□□ 1.81
CLDN7-208ENST00000575313 POLR1AO95602 1720 aaPredicted RBP26.34■■□□□ 1.81
CLDN7-208ENST00000575313 TMEM131LA2VDJ0 1609 aa26.33■■□□□ 1.81
CLDN7-208ENST00000575313 FOXD1Q16676 465 aa26.33■■□□□ 1.81
CLDN7-208ENST00000575313 CHGAP10645 457 aaKnown RBP26.32■■□□□ 1.8
CLDN7-208ENST00000575313 EID1Q9Y6B2 187 aa26.31■■□□□ 1.8
CLDN7-208ENST00000575313 CLTCL1P53675 1640 aa26.31■■□□□ 1.8
CLDN7-208ENST00000575313 SCAF11Q99590 1463 aaKnown RBP26.3■■□□□ 1.8
CLDN7-208ENST00000575313 NEURL4Q96JN8 1562 aa26.29■■□□□ 1.8
CLDN7-208ENST00000575313 MED14O60244 1454 aa26.29■■□□□ 1.8
CLDN7-208ENST00000575313 TXNDC2Q86VQ3 553 aa26.28■■□□□ 1.8
CLDN7-208ENST00000575313 HDGFP51858 240 aaKnown RBP26.27■■□□□ 1.8
CLDN7-208ENST00000575313 CCDC144AA2RUR9 1427 aa26.26■■□□□ 1.79
CLDN7-208ENST00000575313 NPHP4O75161 1426 aaPredicted RBP26.26■■□□□ 1.79
CLDN7-208ENST00000575313 MYO5BQ9ULV0 1848 aa26.25■■□□□ 1.79
CLDN7-208ENST00000575313 LTKP29376 864 aa26.25■■□□□ 1.79
CLDN7-208ENST00000575313 ZFYVE9O95405 1425 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 1608.6 ms