RNA–Protein interactions for RNA: ENST00000574293.1

GSE1-214, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 3

Gene GSE1, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-214ENST00000574293 PPP6R1Q9UPN7 881 aa23.66■■□□□ 1.38
GSE1-214ENST00000574293 CEBPAP49715 358 aaPredicted RBP23.65■■□□□ 1.38
GSE1-214ENST00000574293 EIF2AK4Q9P2K8 1649 aaKnown RBP23.65■■□□□ 1.38
GSE1-214ENST00000574293 CNTLNQ9NXG0 1405 aa23.63■■□□□ 1.37
GSE1-214ENST00000574293 ANKRD50Q9ULJ7 1429 aa23.62■■□□□ 1.37
GSE1-214ENST00000574293 WASHC2CQ9Y4E1 1318 aa23.61■■□□□ 1.37
GSE1-214ENST00000574293 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.61■■□□□ 1.37
GSE1-214ENST00000574293 CLTCQ00610 1675 aaKnown RBP23.6■■□□□ 1.37
GSE1-214ENST00000574293 RNF17Q9BXT8 1623 aaKnown RBP23.59■■□□□ 1.37
GSE1-214ENST00000574293 ZMYM3Q14202 1370 aa23.58■■□□□ 1.37
GSE1-214ENST00000574293 KDM5DQ9BY66 1539 aa23.55■■□□□ 1.36
GSE1-214ENST00000574293 MROH1Q8NDA8 1641 aa23.55■■□□□ 1.36
GSE1-214ENST00000574293 C3P01024 1663 aa23.54■■□□□ 1.36
GSE1-214ENST00000574293 MROH2AA6NES4 1674 aa23.54■■□□□ 1.36
GSE1-214ENST00000574293 KANK1Q14678 1352 aa23.52■■□□□ 1.36
GSE1-214ENST00000574293 FAM135AQ9P2D6 1515 aa23.52■■□□□ 1.36
GSE1-214ENST00000574293 DEPDC5O75140 1603 aa23.51■■□□□ 1.35
GSE1-214ENST00000574293 ABCC3O15438 1527 aa23.5■■□□□ 1.35
GSE1-214ENST00000574293 PRDM15P57071 1507 aaPredicted RBP23.5■■□□□ 1.35
GSE1-214ENST00000574293 NAIPQ13075 1403 aa23.5■■□□□ 1.35
GSE1-214ENST00000574293 ZC3H13Q5T200 1668 aaKnown RBP23.47■■□□□ 1.35
GSE1-214ENST00000574293 CEP152O94986 1710 aa23.47■■□□□ 1.35
GSE1-214ENST00000574293 HFM1A2PYH4 1435 aa23.46■■□□□ 1.35
GSE1-214ENST00000574293 FBXO31Q5XUX0 539 aaPredicted RBP23.46■■□□□ 1.35
GSE1-214ENST00000574293 GCC2Q8IWJ2 1684 aa23.44■■□□□ 1.34
GSE1-214ENST00000574293 PZPP20742 1482 aa23.43■■□□□ 1.34
GSE1-214ENST00000574293 NPATQ14207 1427 aa23.42■■□□□ 1.34
GSE1-214ENST00000574293 UNC13BO14795 1591 aa23.42■■□□□ 1.34
GSE1-214ENST00000574293 VWDEQ8N2E2 1590 aa23.42■■□□□ 1.34
GSE1-214ENST00000574293 NUP155O75694 1391 aa23.41■■□□□ 1.34
GSE1-214ENST00000574293 CAMSAP1Q5T5Y3 1602 aa23.41■■□□□ 1.34
GSE1-214ENST00000574293 LMTK2Q8IWU2 1503 aa23.39■■□□□ 1.34
GSE1-214ENST00000574293 SETD1BQ9UPS6 1966 aaKnown RBP23.38■■□□□ 1.33
GSE1-214ENST00000574293 UHRF1BP1Q6BDS2 1440 aa23.38■■□□□ 1.33
GSE1-214ENST00000574293 PREX1Q8TCU6 1659 aa23.38■■□□□ 1.33
GSE1-214ENST00000574293 LMTK3Q96Q04 1460 aa23.37■■□□□ 1.33
GSE1-214ENST00000574293 TRIM52Q96A61 297 aa23.37■■□□□ 1.33
GSE1-214ENST00000574293 ARHGAP31Q2M1Z3 1444 aa23.36■■□□□ 1.33
GSE1-214ENST00000574293 TNRQ92752 1358 aa23.36■■□□□ 1.33
GSE1-214ENST00000574293 HSPA2P54652 639 aa23.35■■□□□ 1.33
GSE1-214ENST00000574293 SETD5Q9C0A6 1442 aa23.33■■□□□ 1.33
GSE1-214ENST00000574293 CFAP65Q6ZU64 1925 aaKnown RBP23.33■■□□□ 1.33
GSE1-214ENST00000574293 IQGAP3Q86VI3 1631 aa23.33■■□□□ 1.32
GSE1-214ENST00000574293 EFCAB6Q5THR3 1501 aa23.33■■□□□ 1.32
GSE1-214ENST00000574293 ERVK-7P63135 1459 aa23.32■■□□□ 1.32
GSE1-214ENST00000574293 TET3O43151 1660 aa23.31■■□□□ 1.32
GSE1-214ENST00000574293 SPATA31D1Q6ZQQ2 1576 aa23.3■■□□□ 1.32
GSE1-214ENST00000574293 MYO3AQ8NEV4 1616 aa23.29■■□□□ 1.32
GSE1-214ENST00000574293 RAB3GAP2Q9H2M9 1393 aa23.26■■□□□ 1.31
GSE1-214ENST00000574293 RPRD2Q5VT52 1461 aaKnown RBP23.25■■□□□ 1.31
GSE1-214ENST00000574293 CEP170BQ9Y4F5 1589 aaPredicted RBP23.25■■□□□ 1.31
GSE1-214ENST00000574293 A2ML1A8K2U0 1454 aa23.24■■□□□ 1.31
GSE1-214ENST00000574293 SLC4A1APQ9BWU0 796 aaKnown RBP23.24■■□□□ 1.31
GSE1-214ENST00000574293 E9PCH4 1651 aa23.24■■□□□ 1.31
GSE1-214ENST00000574293 NLRP1Q9C000 1473 aa23.24■■□□□ 1.31
GSE1-214ENST00000574293 TRIM26Q12899 539 aaPredicted RBP23.22■■□□□ 1.31
GSE1-214ENST00000574293 NOS1P29475 1434 aa23.22■■□□□ 1.31
GSE1-214ENST00000574293 ZNF142P52746 1687 aaPredicted RBP23.21■■□□□ 1.31
GSE1-214ENST00000574293 ACIN1Q9UKV3 1341 aaKnown RBP23.2■■□□□ 1.3
GSE1-214ENST00000574293 PKD2Q13563 968 aa23.2■■□□□ 1.3
GSE1-214ENST00000574293 IDI1Q13907 227 aa23.19■■□□□ 1.3
GSE1-214ENST00000574293 SYNMO15061 1565 aa23.18■■□□□ 1.3
GSE1-214ENST00000574293 THEMISQ8N1K5 641 aaPredicted RBP23.17■■□□□ 1.3
GSE1-214ENST00000574293 MPHOSPH9Q99550 1183 aa23.17■■□□□ 1.3
GSE1-214ENST00000574293 SLC52A1Q9NWF4 448 aa23.17■■□□□ 1.3
GSE1-214ENST00000574293 STAG3Q9UJ98 1225 aa23.17■■□□□ 1.3
GSE1-214ENST00000574293 UGGT1Q9NYU2 1555 aa23.17■■□□□ 1.3
GSE1-214ENST00000574293 HRCP23327 699 aa23.14■■□□□ 1.29
GSE1-214ENST00000574293 FOXD1Q16676 465 aa23.13■■□□□ 1.29
GSE1-214ENST00000574293 PIK3C2BO00750 1634 aa23.12■■□□□ 1.29
GSE1-214ENST00000574293 NCKAP5LQ9HCH0 1330 aa23.11■■□□□ 1.29
GSE1-214ENST00000574293 PTPRTO14522 1441 aa23.1■■□□□ 1.29
GSE1-214ENST00000574293 CHGAP10645 457 aaKnown RBP23.1■■□□□ 1.29
GSE1-214ENST00000574293 UBR1Q8IWV7 1749 aa23.09■■□□□ 1.29
GSE1-214ENST00000574293 PLA2R1Q13018 1463 aa23.09■■□□□ 1.29
GSE1-214ENST00000574293 STRCQ7RTU9 1775 aa23.09■■□□□ 1.29
GSE1-214ENST00000574293 SPHKAPQ2M3C7 1700 aa23.08■■□□□ 1.29
GSE1-214ENST00000574293 ANKLE2Q86XL3 938 aa23.07■■□□□ 1.28
GSE1-214ENST00000574293 DMRT2Q9Y5R5 561 aa23.06■■□□□ 1.28
GSE1-214ENST00000574293 ADGRB3O60242 1522 aa23.04■■□□□ 1.28
GSE1-214ENST00000574293 TRPM2O94759 1503 aa23.03■■□□□ 1.28
GSE1-214ENST00000574293 TMEM2Q9UHN6 1383 aa23.01■■□□□ 1.27
GSE1-214ENST00000574293 KDM5AP29375 1690 aaKnown RBP23.01■■□□□ 1.27
GSE1-214ENST00000574293 TXNDC2Q86VQ3 553 aa23.01■■□□□ 1.27
GSE1-214ENST00000574293 EID1Q9Y6B2 187 aa23.01■■□□□ 1.27
GSE1-214ENST00000574293 TMEM131LA2VDJ0 1609 aa23■■□□□ 1.27
GSE1-214ENST00000574293 ARHGAP23Q9P227 1491 aa22.99■■□□□ 1.27
GSE1-214ENST00000574293 LTKP29376 864 aa22.99■■□□□ 1.27
GSE1-214ENST00000574293 CLTCL1P53675 1640 aa22.99■■□□□ 1.27
GSE1-214ENST00000574293 SLIT1O75093 1534 aa22.98■■□□□ 1.27
GSE1-214ENST00000574293 POLR1AO95602 1720 aaPredicted RBP22.97■■□□□ 1.27
GSE1-214ENST00000574293 MYO5BQ9ULV0 1848 aa22.96■■□□□ 1.27
GSE1-214ENST00000574293 ZNF326Q5BKZ1 582 aaKnown RBP22.96■■□□□ 1.27
GSE1-214ENST00000574293 CCDC144AA2RUR9 1427 aa22.95■■□□□ 1.26
GSE1-214ENST00000574293 NEURL4Q96JN8 1562 aa22.95■■□□□ 1.26
GSE1-214ENST00000574293 SCAF11Q99590 1463 aaKnown RBP22.95■■□□□ 1.26
GSE1-214ENST00000574293 NPHP4O75161 1426 aaPredicted RBP22.94■■□□□ 1.26
GSE1-214ENST00000574293 RIMS2Q9UQ26 1411 aa22.94■■□□□ 1.26
GSE1-214ENST00000574293 HDGFP51858 240 aaKnown RBP22.94■■□□□ 1.26
GSE1-214ENST00000574293 NUTM2DQ5VT03 806 aaPredicted RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms