RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 TIAM1Q13009 1591 aa19.31■□□□□ 0.68
CTNS-208ENST00000574218 TNRQ92752 1358 aa19.3■□□□□ 0.68
CTNS-208ENST00000574218 EHBP1L1Q8N3D4 1523 aa19.3■□□□□ 0.68
CTNS-208ENST00000574218 RTEL1-TNFRSF6BF6WH68 1400 aa19.28■□□□□ 0.68
CTNS-208ENST00000574218 HSPA1LP34931 641 aa19.28■□□□□ 0.68
CTNS-208ENST00000574218 KDM5DQ9BY66 1539 aa19.28■□□□□ 0.68
CTNS-208ENST00000574218 FAM135AQ9P2D6 1515 aa19.28■□□□□ 0.68
CTNS-208ENST00000574218 SHANK2Q9UPX8 1470 aa19.28■□□□□ 0.68
CTNS-208ENST00000574218 NEURL4Q96JN8 1562 aa19.27■□□□□ 0.68
CTNS-208ENST00000574218 DHX29Q7Z478 1369 aaKnown RBP19.27■□□□□ 0.68
CTNS-208ENST00000574218 PZPP20742 1482 aa19.25■□□□□ 0.67
CTNS-208ENST00000574218 KIF3BO15066 747 aa19.25■□□□□ 0.67
CTNS-208ENST00000574218 ANKLE2Q86XL3 938 aa19.25■□□□□ 0.67
CTNS-208ENST00000574218 ZNF644Q9H582 1327 aaPredicted RBP19.25■□□□□ 0.67
CTNS-208ENST00000574218 MBD5Q9P267 1494 aa19.24■□□□□ 0.67
CTNS-208ENST00000574218 WASHC2CQ9Y4E1 1318 aa19.23■□□□□ 0.67
CTNS-208ENST00000574218 CCDC141Q6ZP82 1450 aa19.22■□□□□ 0.67
CTNS-208ENST00000574218 THEMISQ8N1K5 641 aaPredicted RBP19.22■□□□□ 0.67
CTNS-208ENST00000574218 DEPDC5O75140 1603 aa19.22■□□□□ 0.67
CTNS-208ENST00000574218 FBXO31Q5XUX0 539 aaPredicted RBP19.21■□□□□ 0.67
CTNS-208ENST00000574218 UGGT1Q9NYU2 1555 aa19.21■□□□□ 0.67
CTNS-208ENST00000574218 NLRP1Q9C000 1473 aa19.21■□□□□ 0.67
CTNS-208ENST00000574218 IQGAP1P46940 1657 aa19.2■□□□□ 0.66
CTNS-208ENST00000574218 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.2■□□□□ 0.66
CTNS-208ENST00000574218 VWDEQ8N2E2 1590 aa19.19■□□□□ 0.66
CTNS-208ENST00000574218 CEP162Q5TB80 1403 aa19.19■□□□□ 0.66
CTNS-208ENST00000574218 NPHP4O75161 1426 aaPredicted RBP19.18■□□□□ 0.66
CTNS-208ENST00000574218 CAMSAP2Q08AD1 1489 aa19.17■□□□□ 0.66
CTNS-208ENST00000574218 RSPH4AQ5TD94 716 aa19.17■□□□□ 0.66
CTNS-208ENST00000574218 MIA2Q96PC5 1412 aa19.17■□□□□ 0.66
CTNS-208ENST00000574218 ZC3H13Q5T200 1668 aaKnown RBP19.16■□□□□ 0.66
CTNS-208ENST00000574218 MED14O60244 1454 aa19.16■□□□□ 0.66
CTNS-208ENST00000574218 SYNMO15061 1565 aa19.15■□□□□ 0.66
CTNS-208ENST00000574218 CFAP65Q6ZU64 1925 aaKnown RBP19.15■□□□□ 0.66
CTNS-208ENST00000574218 RNF17Q9BXT8 1623 aaKnown RBP19.14■□□□□ 0.66
CTNS-208ENST00000574218 TSPY4P0CV99 314 aa19.13■□□□□ 0.65
CTNS-208ENST00000574218 TSPY10P0CW01 314 aa19.13■□□□□ 0.65
CTNS-208ENST00000574218 ARHGEF5Q12774 1597 aa19.12■□□□□ 0.65
CTNS-208ENST00000574218 NCOA2Q15596 1464 aa19.12■□□□□ 0.65
CTNS-208ENST00000574218 STRCP1A6NGW2 1772 aa19.11■□□□□ 0.65
CTNS-208ENST00000574218 EIF2AK4Q9P2K8 1649 aaKnown RBP19.08■□□□□ 0.65
CTNS-208ENST00000574218 ALKQ9UM73 1620 aa19.08■□□□□ 0.65
CTNS-208ENST00000574218 CEP152O94986 1710 aa19.08■□□□□ 0.64
CTNS-208ENST00000574218 ABCC3O15438 1527 aa19.07■□□□□ 0.64
CTNS-208ENST00000574218 LRRC7Q96NW7 1537 aa19.07■□□□□ 0.64
CTNS-208ENST00000574218 UBR1Q8IWV7 1749 aa19.06■□□□□ 0.64
CTNS-208ENST00000574218 ERVK-7P63135 1459 aa19.04■□□□□ 0.64
CTNS-208ENST00000574218 MAST1Q9Y2H9 1570 aa19.04■□□□□ 0.64
CTNS-208ENST00000574218 SCAF11Q99590 1463 aaKnown RBP19.01■□□□□ 0.63
CTNS-208ENST00000574218 XIRP1Q702N8 1843 aaKnown RBP18.98■□□□□ 0.63
CTNS-208ENST00000574218 MROH1Q8NDA8 1641 aa18.97■□□□□ 0.63
CTNS-208ENST00000574218 EID1Q9Y6B2 187 aa18.96■□□□□ 0.63
CTNS-208ENST00000574218 DUOX2Q9NRD8 1548 aa18.95■□□□□ 0.62
CTNS-208ENST00000574218 TXNDC2Q86VQ3 553 aa18.95■□□□□ 0.62
CTNS-208ENST00000574218 SLIT1O75093 1534 aa18.94■□□□□ 0.62
CTNS-208ENST00000574218 LRRC9Q6ZRR7 1453 aa18.93■□□□□ 0.62
CTNS-208ENST00000574218 ARHGAP23Q9P227 1491 aa18.92■□□□□ 0.62
CTNS-208ENST00000574218 STAG3Q9UJ98 1225 aa18.92■□□□□ 0.62
CTNS-208ENST00000574218 PIK3C2BO00750 1634 aa18.92■□□□□ 0.62
CTNS-208ENST00000574218 MYOM3Q5VTT5 1437 aa18.9■□□□□ 0.62
CTNS-208ENST00000574218 PRDM15P57071 1507 aaPredicted RBP18.9■□□□□ 0.62
CTNS-208ENST00000574218 CROCC2H7BZ55 1655 aa18.89■□□□□ 0.61
CTNS-208ENST00000574218 LTKP29376 864 aa18.89■□□□□ 0.61
CTNS-208ENST00000574218 ARHGAP31Q2M1Z3 1444 aa18.88■□□□□ 0.61
CTNS-208ENST00000574218 KDM5AP29375 1690 aaKnown RBP18.88■□□□□ 0.61
CTNS-208ENST00000574218 KANK1Q14678 1352 aa18.87■□□□□ 0.61
CTNS-208ENST00000574218 ROBO1Q9Y6N7 1651 aa18.87■□□□□ 0.61
CTNS-208ENST00000574218 FAM135BQ49AJ0 1406 aa18.86■□□□□ 0.61
CTNS-208ENST00000574218 VPS8Q8N3P4 1428 aa18.85■□□□□ 0.61
CTNS-208ENST00000574218 ERBINQ96RT1 1412 aa18.85■□□□□ 0.61
CTNS-208ENST00000574218 KIF15Q9NS87 1388 aa18.85■□□□□ 0.61
CTNS-208ENST00000574218 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.85■□□□□ 0.61
CTNS-208ENST00000574218 RGS17Q9UGC6 210 aaPredicted RBP18.85■□□□□ 0.61
CTNS-208ENST00000574218 EFCAB6Q5THR3 1501 aa18.84■□□□□ 0.61
CTNS-208ENST00000574218 TMEM2Q9UHN6 1383 aa18.84■□□□□ 0.61
CTNS-208ENST00000574218 TMEM94Q12767 1356 aa18.82■□□□□ 0.6
CTNS-208ENST00000574218 MAP3K1Q13233 1512 aa18.81■□□□□ 0.6
CTNS-208ENST00000574218 PROSER2Q86WR7 435 aaPredicted RBP18.81■□□□□ 0.6
CTNS-208ENST00000574218 PHLPP1O60346 1717 aa18.8■□□□□ 0.6
CTNS-208ENST00000574218 KCNA6P17658 529 aa18.8■□□□□ 0.6
CTNS-208ENST00000574218 RRP7BPQ9NSQ0 103 aa18.8■□□□□ 0.6
CTNS-208ENST00000574218 PTPN23Q9H3S7 1636 aa18.8■□□□□ 0.6
CTNS-208ENST00000574218 FOXD1Q16676 465 aa18.79■□□□□ 0.6
CTNS-208ENST00000574218 BCANQ96GW7 911 aa18.79■□□□□ 0.6
CTNS-208ENST00000574218 NKTRP30414 1462 aaKnown RBP18.77■□□□□ 0.6
CTNS-208ENST00000574218 POTEAQ6S8J7 498 aa18.77■□□□□ 0.6
CTNS-208ENST00000574218 MSH6P52701 1360 aa18.77■□□□□ 0.6
CTNS-208ENST00000574218 SETD1AO15047 1707 aaKnown RBP18.77■□□□□ 0.59
CTNS-208ENST00000574218 ADGRB3O60242 1522 aa18.76■□□□□ 0.59
CTNS-208ENST00000574218 KANK4Q5T7N3 995 aaPredicted RBP18.76■□□□□ 0.59
CTNS-208ENST00000574218 SLC26A8Q96RN1 970 aa18.76■□□□□ 0.59
CTNS-208ENST00000574218 NWD1Q149M9 1564 aa18.76■□□□□ 0.59
CTNS-208ENST00000574218 TET3O43151 1660 aa18.75■□□□□ 0.59
CTNS-208ENST00000574218 ABCC5O15440 1437 aa18.74■□□□□ 0.59
CTNS-208ENST00000574218 LMTK2Q8IWU2 1503 aa18.74■□□□□ 0.59
CTNS-208ENST00000574218 IDI1Q13907 227 aa18.74■□□□□ 0.59
CTNS-208ENST00000574218 APLP2Q06481 763 aa18.73■□□□□ 0.59
CTNS-208ENST00000574218 RBM33Q96EV2 1170 aaKnown RBP18.73■□□□□ 0.59
CTNS-208ENST00000574218 DAPK1P53355 1430 aa18.73■□□□□ 0.59
CTNS-208ENST00000574218 CHD2O14647 1828 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms