RNA–Protein interactions for RNA: ENST00000573553.5

PAM16-208, Transcript of presequence translocase associated motor 16, humanhuman

TSL 2 BASIC

Gene PAM16, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAM16-208ENST00000573553 KIF15Q9NS87 1388 aa27.1■■□□□ 1.93
PAM16-208ENST00000573553 KDM5DQ9BY66 1539 aa27.1■■□□□ 1.93
PAM16-208ENST00000573553 PTPRKQ15262 1439 aa27.09■■□□□ 1.93
PAM16-208ENST00000573553 CHIC2Q9UKJ5 165 aa27.09■■□□□ 1.93
PAM16-208ENST00000573553 CEP152O94986 1710 aa27.08■■□□□ 1.93
PAM16-208ENST00000573553 FAM50AQ14320 339 aaKnown RBP27.08■■□□□ 1.93
PAM16-208ENST00000573553 RRP7BPQ9NSQ0 103 aa27.07■■□□□ 1.92
PAM16-208ENST00000573553 MYO3AQ8NEV4 1616 aa27.06■■□□□ 1.92
PAM16-208ENST00000573553 STRCQ7RTU9 1775 aa27.06■■□□□ 1.92
PAM16-208ENST00000573553 NPATQ14207 1427 aa27.05■■□□□ 1.92
PAM16-208ENST00000573553 UHRF1BP1Q6BDS2 1440 aa27.05■■□□□ 1.92
PAM16-208ENST00000573553 ABCC3O15438 1527 aa27.05■■□□□ 1.92
PAM16-208ENST00000573553 ADGRL2O95490 1459 aa27.04■■□□□ 1.92
PAM16-208ENST00000573553 NCOA1Q15788 1441 aa27.03■■□□□ 1.92
PAM16-208ENST00000573553 DEPDC5O75140 1603 aa27.02■■□□□ 1.92
PAM16-208ENST00000573553 FAM135AQ9P2D6 1515 aa27.02■■□□□ 1.92
PAM16-208ENST00000573553 PPP6R1Q9UPN7 881 aa27.01■■□□□ 1.91
PAM16-208ENST00000573553 ZNF142P52746 1687 aaPredicted RBP27.01■■□□□ 1.91
PAM16-208ENST00000573553 ZC3H13Q5T200 1668 aaKnown RBP27.01■■□□□ 1.91
PAM16-208ENST00000573553 ERBINQ96RT1 1412 aa27■■□□□ 1.91
PAM16-208ENST00000573553 PRDM15P57071 1507 aaPredicted RBP27■■□□□ 1.91
PAM16-208ENST00000573553 FBXO31Q5XUX0 539 aaPredicted RBP26.99■■□□□ 1.91
PAM16-208ENST00000573553 CFAP65Q6ZU64 1925 aaKnown RBP26.98■■□□□ 1.91
PAM16-208ENST00000573553 CAMSAP1Q5T5Y3 1602 aa26.98■■□□□ 1.91
PAM16-208ENST00000573553 PZPP20742 1482 aa26.98■■□□□ 1.91
PAM16-208ENST00000573553 ANKRD30AQ9BXX3 1397 aa26.97■■□□□ 1.91
PAM16-208ENST00000573553 WASHC2CQ9Y4E1 1318 aa26.96■■□□□ 1.91
PAM16-208ENST00000573553 CEP170BQ9Y4F5 1589 aaPredicted RBP26.95■■□□□ 1.9
PAM16-208ENST00000573553 VWDEQ8N2E2 1590 aa26.9■■□□□ 1.9
PAM16-208ENST00000573553 RRBP1Q9P2E9 1410 aaKnown RBP26.88■■□□□ 1.89
PAM16-208ENST00000573553 TNRQ92752 1358 aa26.87■■□□□ 1.89
PAM16-208ENST00000573553 SPATA31D1Q6ZQQ2 1576 aa26.87■■□□□ 1.89
PAM16-208ENST00000573553 ITGAEP38570 1179 aa26.85■■□□□ 1.89
PAM16-208ENST00000573553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.85■■□□□ 1.89
PAM16-208ENST00000573553 ERVK-7P63135 1459 aa26.85■■□□□ 1.89
PAM16-208ENST00000573553 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.84■■□□□ 1.89
PAM16-208ENST00000573553 ANKRD50Q9ULJ7 1429 aa26.84■■□□□ 1.89
PAM16-208ENST00000573553 A2ML1A8K2U0 1454 aa26.84■■□□□ 1.89
PAM16-208ENST00000573553 LMTK2Q8IWU2 1503 aa26.8■■□□□ 1.88
PAM16-208ENST00000573553 UNC13BO14795 1591 aa26.8■■□□□ 1.88
PAM16-208ENST00000573553 ROCK1Q13464 1354 aa26.8■■□□□ 1.88
PAM16-208ENST00000573553 ARHGAP31Q2M1Z3 1444 aa26.77■■□□□ 1.88
PAM16-208ENST00000573553 EFCAB6Q5THR3 1501 aa26.76■■□□□ 1.87
PAM16-208ENST00000573553 NCKAP5LQ9HCH0 1330 aa26.75■■□□□ 1.87
PAM16-208ENST00000573553 PLA2R1Q13018 1463 aa26.74■■□□□ 1.87
PAM16-208ENST00000573553 NLRP1Q9C000 1473 aa26.74■■□□□ 1.87
PAM16-208ENST00000573553 POLR1AO95602 1720 aaPredicted RBP26.73■■□□□ 1.87
PAM16-208ENST00000573553 SYNMO15061 1565 aa26.72■■□□□ 1.87
PAM16-208ENST00000573553 NEURL4Q96JN8 1562 aa26.72■■□□□ 1.87
PAM16-208ENST00000573553 UBR1Q8IWV7 1749 aa26.72■■□□□ 1.87
PAM16-208ENST00000573553 KANK1Q14678 1352 aa26.71■■□□□ 1.87
PAM16-208ENST00000573553 TET3O43151 1660 aa26.71■■□□□ 1.87
PAM16-208ENST00000573553 PTPRTO14522 1441 aa26.71■■□□□ 1.87
PAM16-208ENST00000573553 UGGT1Q9NYU2 1555 aa26.71■■□□□ 1.87
PAM16-208ENST00000573553 GCC2Q8IWJ2 1684 aa26.7■■□□□ 1.86
PAM16-208ENST00000573553 PIK3C2BO00750 1634 aa26.68■■□□□ 1.86
PAM16-208ENST00000573553 IQGAP3Q86VI3 1631 aa26.68■■□□□ 1.86
PAM16-208ENST00000573553 E9PCH4 1651 aa26.67■■□□□ 1.86
PAM16-208ENST00000573553 ILDR1Q86SU0 546 aaPredicted RBP26.64■■□□□ 1.86
PAM16-208ENST00000573553 NOS1P29475 1434 aa26.64■■□□□ 1.85
PAM16-208ENST00000573553 NAIPQ13075 1403 aa26.63■■□□□ 1.85
PAM16-208ENST00000573553 LTBP4Q8N2S1 1624 aa26.62■■□□□ 1.85
PAM16-208ENST00000573553 DMRT2Q9Y5R5 561 aa26.6■■□□□ 1.85
PAM16-208ENST00000573553 MYO5BQ9ULV0 1848 aa26.6■■□□□ 1.85
PAM16-208ENST00000573553 PKD2Q13563 968 aa26.57■■□□□ 1.84
PAM16-208ENST00000573553 RPRD2Q5VT52 1461 aaKnown RBP26.55■■□□□ 1.84
PAM16-208ENST00000573553 NUP155O75694 1391 aa26.55■■□□□ 1.84
PAM16-208ENST00000573553 THEMISQ8N1K5 641 aaPredicted RBP26.54■■□□□ 1.84
PAM16-208ENST00000573553 ARHGAP23Q9P227 1491 aa26.54■■□□□ 1.84
PAM16-208ENST00000573553 IQGAP1P46940 1657 aa26.54■■□□□ 1.84
PAM16-208ENST00000573553 IDI1Q13907 227 aa26.53■■□□□ 1.84
PAM16-208ENST00000573553 ZNF335Q9H4Z2 1342 aaPredicted RBP26.53■■□□□ 1.84
PAM16-208ENST00000573553 HFM1A2PYH4 1435 aa26.53■■□□□ 1.84
PAM16-208ENST00000573553 KDM5AP29375 1690 aaKnown RBP26.53■■□□□ 1.84
PAM16-208ENST00000573553 SLIT1O75093 1534 aa26.52■■□□□ 1.84
PAM16-208ENST00000573553 CERKQ8TCT0 537 aa26.52■■□□□ 1.84
PAM16-208ENST00000573553 MED14O60244 1454 aa26.51■■□□□ 1.83
PAM16-208ENST00000573553 ADGRB3O60242 1522 aa26.5■■□□□ 1.83
PAM16-208ENST00000573553 NPHP4O75161 1426 aaPredicted RBP26.48■■□□□ 1.83
PAM16-208ENST00000573553 ANKLE2Q86XL3 938 aa26.48■■□□□ 1.83
PAM16-208ENST00000573553 STRCP1A6NGW2 1772 aa26.48■■□□□ 1.83
PAM16-208ENST00000573553 LTKP29376 864 aa26.47■■□□□ 1.83
PAM16-208ENST00000573553 TMEM131LA2VDJ0 1609 aa26.47■■□□□ 1.83
PAM16-208ENST00000573553 SPHKAPQ2M3C7 1700 aa26.46■■□□□ 1.83
PAM16-208ENST00000573553 SCAF11Q99590 1463 aaKnown RBP26.45■■□□□ 1.82
PAM16-208ENST00000573553 FBXO41Q8TF61 875 aa26.43■■□□□ 1.82
PAM16-208ENST00000573553 TMEM2Q9UHN6 1383 aa26.43■■□□□ 1.82
PAM16-208ENST00000573553 SLC52A1Q9NWF4 448 aa26.38■■□□□ 1.81
PAM16-208ENST00000573553 TXNDC2Q86VQ3 553 aa26.37■■□□□ 1.81
PAM16-208ENST00000573553 STAG3Q9UJ98 1225 aa26.36■■□□□ 1.81
PAM16-208ENST00000573553 ZFYVE9O95405 1425 aa26.36■■□□□ 1.81
PAM16-208ENST00000573553 CLTCL1P53675 1640 aa26.36■■□□□ 1.81
PAM16-208ENST00000573553 TRIM52Q96A61 297 aa26.31■■□□□ 1.8
PAM16-208ENST00000573553 TRPM2O94759 1503 aa26.29■■□□□ 1.8
PAM16-208ENST00000573553 SENP3Q9H4L4 574 aaPredicted RBP26.29■■□□□ 1.8
PAM16-208ENST00000573553 RIMS2Q9UQ26 1411 aa26.29■■□□□ 1.8
PAM16-208ENST00000573553 IQSEC2Q5JU85 1478 aa26.29■■□□□ 1.8
PAM16-208ENST00000573553 CPS1P31327 1500 aa26.28■■□□□ 1.8
PAM16-208ENST00000573553 XIRP1Q702N8 1843 aaKnown RBP26.28■■□□□ 1.8
PAM16-208ENST00000573553 CHGAP10645 457 aaKnown RBP26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms