RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 TCOF1Q13428 1488 aaKnown RBP13.19□□□□□ -0.3
NPLOC4-211ENST00000573212 UBAP1LF5GYI3 381 aa13.19□□□□□ -0.3
NPLOC4-211ENST00000573212 SYCP2Q9BX26 1530 aa13.18□□□□□ -0.3
NPLOC4-211ENST00000573212 PLEKHH2Q8IVE3 1493 aa13.18□□□□□ -0.3
NPLOC4-211ENST00000573212 ZNF644Q9H582 1327 aaPredicted RBP13.17□□□□□ -0.3
NPLOC4-211ENST00000573212 PLXNC1O60486 1568 aa13.17□□□□□ -0.3
NPLOC4-211ENST00000573212 ATP7AQ04656 1500 aa13.17□□□□□ -0.3
NPLOC4-211ENST00000573212 CCNB3Q8WWL7 1395 aa13.17□□□□□ -0.3
NPLOC4-211ENST00000573212 MBD5Q9P267 1494 aa13.16□□□□□ -0.3
NPLOC4-211ENST00000573212 SPATA31D1Q6ZQQ2 1576 aa13.15□□□□□ -0.3
NPLOC4-211ENST00000573212 DHX29Q7Z478 1369 aaKnown RBP13.15□□□□□ -0.3
NPLOC4-211ENST00000573212 RTEL1-TNFRSF6BF6WH68 1400 aa13.14□□□□□ -0.31
NPLOC4-211ENST00000573212 INO80Q9ULG1 1556 aaPredicted RBP13.13□□□□□ -0.31
NPLOC4-211ENST00000573212 FBXO31Q5XUX0 539 aaPredicted RBP13.13□□□□□ -0.31
NPLOC4-211ENST00000573212 SUPT6HQ7KZ85 1726 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-211ENST00000573212 CEP170BQ9Y4F5 1589 aaPredicted RBP13.12□□□□□ -0.31
NPLOC4-211ENST00000573212 MTUS2Q5JR59 1369 aa13.12□□□□□ -0.31
NPLOC4-211ENST00000573212 CLTCQ00610 1675 aaKnown RBP13.12□□□□□ -0.31
NPLOC4-211ENST00000573212 A2ML1A8K2U0 1454 aa13.11□□□□□ -0.31
NPLOC4-211ENST00000573212 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.11□□□□□ -0.316e-8■■□□□ 14.5
NPLOC4-211ENST00000573212 ATF5Q9Y2D1 282 aaPredicted RBP13.11□□□□□ -0.31
NPLOC4-211ENST00000573212 ZNF142P52746 1687 aaPredicted RBP13.1□□□□□ -0.31
NPLOC4-211ENST00000573212 RSPH4AQ5TD94 716 aa13.1□□□□□ -0.31
NPLOC4-211ENST00000573212 MYO3AQ8NEV4 1616 aa13.1□□□□□ -0.31
NPLOC4-211ENST00000573212 KIF3BO15066 747 aa13.09□□□□□ -0.31
NPLOC4-211ENST00000573212 HSPA1LP34931 641 aa13.09□□□□□ -0.31
NPLOC4-211ENST00000573212 TNRQ92752 1358 aa13.07□□□□□ -0.32
NPLOC4-211ENST00000573212 CEP162Q5TB80 1403 aa13.07□□□□□ -0.32
NPLOC4-211ENST00000573212 DNMT1P26358 1616 aaKnown RBP13.07□□□□□ -0.32
NPLOC4-211ENST00000573212 TOM1O60784 492 aa13.07□□□□□ -0.32
NPLOC4-211ENST00000573212 ANKLE2Q86XL3 938 aa13.07□□□□□ -0.32
NPLOC4-211ENST00000573212 THEMISQ8N1K5 641 aaPredicted RBP13.07□□□□□ -0.32
NPLOC4-211ENST00000573212 MIA2Q96PC5 1412 aa13.05□□□□□ -0.32
NPLOC4-211ENST00000573212 SHANK2Q9UPX8 1470 aa13.05□□□□□ -0.32
NPLOC4-211ENST00000573212 U3KPZ7 1027 aaPredicted RBP13.05□□□□□ -0.32
NPLOC4-211ENST00000573212 TIAM1Q13009 1591 aa13.05□□□□□ -0.32
NPLOC4-211ENST00000573212 WASHC2CQ9Y4E1 1318 aa13.05□□□□□ -0.32
NPLOC4-211ENST00000573212 ADGBQ8N7X0 1667 aa13.05□□□□□ -0.32
NPLOC4-211ENST00000573212 PZPP20742 1482 aa13.04□□□□□ -0.32
NPLOC4-211ENST00000573212 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.04□□□□□ -0.32
NPLOC4-211ENST00000573212 PIP4K2BP78356 416 aa13.03□□□□□ -0.32
NPLOC4-211ENST00000573212 CPS1P31327 1500 aa13.03□□□□□ -0.32
NPLOC4-211ENST00000573212 NEURL4Q96JN8 1562 aa13.03□□□□□ -0.32
NPLOC4-211ENST00000573212 MED14O60244 1454 aa13.02□□□□□ -0.33
NPLOC4-211ENST00000573212 TSPY4P0CV99 314 aa13.01□□□□□ -0.33
NPLOC4-211ENST00000573212 TSPY10P0CW01 314 aa13.01□□□□□ -0.33
NPLOC4-211ENST00000573212 CCDC141Q6ZP82 1450 aa13.01□□□□□ -0.33
NPLOC4-211ENST00000573212 EHBP1L1Q8N3D4 1523 aa13.01□□□□□ -0.33
NPLOC4-211ENST00000573212 FAM135AQ9P2D6 1515 aa13.01□□□□□ -0.33
NPLOC4-211ENST00000573212 NLRP1Q9C000 1473 aa13□□□□□ -0.33
NPLOC4-211ENST00000573212 SAMD1Q6SPF0 538 aaPredicted RBP13□□□□□ -0.33
NPLOC4-211ENST00000573212 KDM5DQ9BY66 1539 aa12.99□□□□□ -0.33
NPLOC4-211ENST00000573212 NCOA2Q15596 1464 aa12.99□□□□□ -0.33
NPLOC4-211ENST00000573212 NPHP4O75161 1426 aaPredicted RBP12.99□□□□□ -0.33
NPLOC4-211ENST00000573212 VWDEQ8N2E2 1590 aa12.98□□□□□ -0.33
NPLOC4-211ENST00000573212 ALKQ9UM73 1620 aa12.97□□□□□ -0.33
NPLOC4-211ENST00000573212 UGGT1Q9NYU2 1555 aa12.97□□□□□ -0.33
NPLOC4-211ENST00000573212 CAMSAP2Q08AD1 1489 aa12.97□□□□□ -0.33
NPLOC4-211ENST00000573212 MED1Q15648 1581 aaPredicted RBP12.95□□□□□ -0.34
NPLOC4-211ENST00000573212 DEPDC5O75140 1603 aa12.95□□□□□ -0.34
NPLOC4-211ENST00000573212 ARHGEF5Q12774 1597 aa12.94□□□□□ -0.34
NPLOC4-211ENST00000573212 LRRC7Q96NW7 1537 aa12.93□□□□□ -0.34
NPLOC4-211ENST00000573212 POLR1AO95602 1720 aaPredicted RBP12.93□□□□□ -0.34
NPLOC4-211ENST00000573212 LTKP29376 864 aa12.92□□□□□ -0.34
NPLOC4-211ENST00000573212 ABCC3O15438 1527 aa12.91□□□□□ -0.34
NPLOC4-211ENST00000573212 ERVK-7P63135 1459 aa12.9□□□□□ -0.34
NPLOC4-211ENST00000573212 KANK4Q5T7N3 995 aaPredicted RBP12.89□□□□□ -0.35
NPLOC4-211ENST00000573212 TXNDC2Q86VQ3 553 aa12.89□□□□□ -0.35
NPLOC4-211ENST00000573212 RGS17Q9UGC6 210 aaPredicted RBP12.89□□□□□ -0.35
NPLOC4-211ENST00000573212 LRRC9Q6ZRR7 1453 aa12.89□□□□□ -0.35
NPLOC4-211ENST00000573212 MAST1Q9Y2H9 1570 aa12.88□□□□□ -0.35
NPLOC4-211ENST00000573212 RNF17Q9BXT8 1623 aaKnown RBP12.88□□□□□ -0.35
NPLOC4-211ENST00000573212 ARHGAP23Q9P227 1491 aa12.87□□□□□ -0.35
NPLOC4-211ENST00000573212 ARHGAP31Q2M1Z3 1444 aa12.87□□□□□ -0.35
NPLOC4-211ENST00000573212 STRCP1A6NGW2 1772 aa12.86□□□□□ -0.35
NPLOC4-211ENST00000573212 IQGAP1P46940 1657 aa12.86□□□□□ -0.35
NPLOC4-211ENST00000573212 MROH1Q8NDA8 1641 aa12.85□□□□□ -0.35
NPLOC4-211ENST00000573212 SCAF11Q99590 1463 aaKnown RBP12.85□□□□□ -0.35
NPLOC4-211ENST00000573212 SLIT1O75093 1534 aa12.84□□□□□ -0.35
NPLOC4-211ENST00000573212 MYOM3Q5VTT5 1437 aa12.84□□□□□ -0.35
NPLOC4-211ENST00000573212 FAM135BQ49AJ0 1406 aa12.83□□□□□ -0.36
NPLOC4-211ENST00000573212 VPS8Q8N3P4 1428 aa12.83□□□□□ -0.36
NPLOC4-211ENST00000573212 EID1Q9Y6B2 187 aa12.83□□□□□ -0.36
NPLOC4-211ENST00000573212 EIF2AK4Q9P2K8 1649 aaKnown RBP12.83□□□□□ -0.36
NPLOC4-211ENST00000573212 ZC3H13Q5T200 1668 aaKnown RBP12.83□□□□□ -0.36
NPLOC4-211ENST00000573212 DUOX2Q9NRD8 1548 aa12.83□□□□□ -0.36
NPLOC4-211ENST00000573212 TMEM2Q9UHN6 1383 aa12.82□□□□□ -0.36
NPLOC4-211ENST00000573212 LOC105371045A0A1W2PR82 267 aa12.82□□□□□ -0.36
NPLOC4-211ENST00000573212 IDI1Q13907 227 aa12.82□□□□□ -0.36
NPLOC4-211ENST00000573212 MAP3K1Q13233 1512 aa12.82□□□□□ -0.36
NPLOC4-211ENST00000573212 ABCC5O15440 1437 aa12.81□□□□□ -0.36
NPLOC4-211ENST00000573212 KCNA6P17658 529 aa12.81□□□□□ -0.36
NPLOC4-211ENST00000573212 RRP7BPQ9NSQ0 103 aa12.81□□□□□ -0.36
NPLOC4-211ENST00000573212 UBR1Q8IWV7 1749 aa12.81□□□□□ -0.36
NPLOC4-211ENST00000573212 SYNMO15061 1565 aa12.81□□□□□ -0.36
NPLOC4-211ENST00000573212 KIF15Q9NS87 1388 aa12.8□□□□□ -0.36
NPLOC4-211ENST00000573212 POTEAQ6S8J7 498 aa12.78□□□□□ -0.36
NPLOC4-211ENST00000573212 ZNF219Q9P2Y4 722 aaPredicted RBP12.78□□□□□ -0.36
NPLOC4-211ENST00000573212 TMEM94Q12767 1356 aa12.78□□□□□ -0.36
NPLOC4-211ENST00000573212 ERBINQ96RT1 1412 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms