RNA–Protein interactions for RNA: ENST00000572116.1

ATP2A3-210, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 1 (best)

Gene ATP2A3, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-210ENST00000572116 RRP7BPQ9NSQ0 103 aa17.61■□□□□ 0.41
ATP2A3-210ENST00000572116 ZC3H13Q5T200 1668 aaKnown RBP17.61■□□□□ 0.41
ATP2A3-210ENST00000572116 ERBINQ96RT1 1412 aa17.6■□□□□ 0.41
ATP2A3-210ENST00000572116 MROH1Q8NDA8 1641 aa17.59■□□□□ 0.41
ATP2A3-210ENST00000572116 ROCK1Q13464 1354 aa17.58■□□□□ 0.4
ATP2A3-210ENST00000572116 KIF3BO15066 747 aa17.56■□□□□ 0.4
ATP2A3-210ENST00000572116 SETD1BQ9UPS6 1966 aaKnown RBP17.56■□□□□ 0.4
ATP2A3-210ENST00000572116 PRDM15P57071 1507 aaPredicted RBP17.55■□□□□ 0.4
ATP2A3-210ENST00000572116 PTPRMP28827 1452 aa17.55■□□□□ 0.4
ATP2A3-210ENST00000572116 CAMSAP1Q5T5Y3 1602 aa17.54■□□□□ 0.4
ATP2A3-210ENST00000572116 UNC13BO14795 1591 aa17.54■□□□□ 0.4
ATP2A3-210ENST00000572116 KDM5DQ9BY66 1539 aa17.54■□□□□ 0.4
ATP2A3-210ENST00000572116 FAM135AQ9P2D6 1515 aa17.54■□□□□ 0.4
ATP2A3-210ENST00000572116 GGT6Q6P531 493 aa17.54■□□□□ 0.4
ATP2A3-210ENST00000572116 ANKRD50Q9ULJ7 1429 aa17.53■□□□□ 0.4
ATP2A3-210ENST00000572116 ESF1Q9H501 851 aaKnown RBP17.51■□□□□ 0.39
ATP2A3-210ENST00000572116 CNTLNQ9NXG0 1405 aa17.51■□□□□ 0.39
ATP2A3-210ENST00000572116 PREX1Q8TCU6 1659 aa17.5■□□□□ 0.39
ATP2A3-210ENST00000572116 ABCC3O15438 1527 aa17.49■□□□□ 0.39
ATP2A3-210ENST00000572116 AEBP2Q6ZN18 517 aaPredicted RBP17.49■□□□□ 0.39
ATP2A3-210ENST00000572116 VWDEQ8N2E2 1590 aa17.48■□□□□ 0.39
ATP2A3-210ENST00000572116 NAIPQ13075 1403 aa17.47■□□□□ 0.39
ATP2A3-210ENST00000572116 IQGAP3Q86VI3 1631 aa17.47■□□□□ 0.39
ATP2A3-210ENST00000572116 TET3O43151 1660 aa17.47■□□□□ 0.39
ATP2A3-210ENST00000572116 HFM1A2PYH4 1435 aa17.47■□□□□ 0.39
ATP2A3-210ENST00000572116 PPP6R1Q9UPN7 881 aa17.46■□□□□ 0.39
ATP2A3-210ENST00000572116 PLPPR3Q6T4P5 718 aa17.45■□□□□ 0.38
ATP2A3-210ENST00000572116 WASHC2CQ9Y4E1 1318 aa17.44■□□□□ 0.38
ATP2A3-210ENST00000572116 KANK1Q14678 1352 aa17.43■□□□□ 0.38
ATP2A3-210ENST00000572116 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.43■□□□□ 0.38
ATP2A3-210ENST00000572116 E9PCH4 1651 aa17.42■□□□□ 0.38
ATP2A3-210ENST00000572116 ZMYM3Q14202 1370 aa17.41■□□□□ 0.38
ATP2A3-210ENST00000572116 MYO3AQ8NEV4 1616 aa17.41■□□□□ 0.38
ATP2A3-210ENST00000572116 CEBPAP49715 358 aaPredicted RBP17.41■□□□□ 0.38
ATP2A3-210ENST00000572116 EFCAB6Q5THR3 1501 aa17.41■□□□□ 0.38
ATP2A3-210ENST00000572116 LMTK2Q8IWU2 1503 aa17.41■□□□□ 0.38
ATP2A3-210ENST00000572116 ZNF142P52746 1687 aaPredicted RBP17.4■□□□□ 0.38
ATP2A3-210ENST00000572116 PZPP20742 1482 aa17.4■□□□□ 0.38
ATP2A3-210ENST00000572116 SPHKAPQ2M3C7 1700 aa17.38■□□□□ 0.37
ATP2A3-210ENST00000572116 MYO5BQ9ULV0 1848 aa17.37■□□□□ 0.37
ATP2A3-210ENST00000572116 NPATQ14207 1427 aa17.36■□□□□ 0.37
ATP2A3-210ENST00000572116 SPATA31D1Q6ZQQ2 1576 aa17.35■□□□□ 0.37
ATP2A3-210ENST00000572116 NUP155O75694 1391 aa17.34■□□□□ 0.37
ATP2A3-210ENST00000572116 SETD5Q9C0A6 1442 aa17.34■□□□□ 0.37
ATP2A3-210ENST00000572116 ARHGAP31Q2M1Z3 1444 aa17.33■□□□□ 0.36
ATP2A3-210ENST00000572116 ERVK-7P63135 1459 aa17.32■□□□□ 0.36
ATP2A3-210ENST00000572116 SYNMO15061 1565 aa17.31■□□□□ 0.36
ATP2A3-210ENST00000572116 CEP170BQ9Y4F5 1589 aaPredicted RBP17.31■□□□□ 0.36
ATP2A3-210ENST00000572116 LMTK3Q96Q04 1460 aa17.31■□□□□ 0.36
ATP2A3-210ENST00000572116 FBXO31Q5XUX0 539 aaPredicted RBP17.3■□□□□ 0.36
ATP2A3-210ENST00000572116 RPRD2Q5VT52 1461 aaKnown RBP17.3■□□□□ 0.36
ATP2A3-210ENST00000572116 UBR1Q8IWV7 1749 aa17.3■□□□□ 0.36
ATP2A3-210ENST00000572116 UHRF1BP1Q6BDS2 1440 aa17.3■□□□□ 0.36
ATP2A3-210ENST00000572116 KIF1BO60333 1816 aa17.29■□□□□ 0.36
ATP2A3-210ENST00000572116 TRIM52Q96A61 297 aa17.29■□□□□ 0.36
ATP2A3-210ENST00000572116 PIK3C2BO00750 1634 aa17.29■□□□□ 0.36
ATP2A3-210ENST00000572116 TNRQ92752 1358 aa17.28■□□□□ 0.36
ATP2A3-210ENST00000572116 RAB3GAP2Q9H2M9 1393 aa17.28■□□□□ 0.36
ATP2A3-210ENST00000572116 POLR1AO95602 1720 aaPredicted RBP17.28■□□□□ 0.36
ATP2A3-210ENST00000572116 KDM5AP29375 1690 aaKnown RBP17.27■□□□□ 0.36
ATP2A3-210ENST00000572116 TRIM26Q12899 539 aaPredicted RBP17.27■□□□□ 0.36
ATP2A3-210ENST00000572116 STRCQ7RTU9 1775 aa17.25■□□□□ 0.35
ATP2A3-210ENST00000572116 NLRP1Q9C000 1473 aa17.24■□□□□ 0.35
ATP2A3-210ENST00000572116 A2ML1A8K2U0 1454 aa17.24■□□□□ 0.35
ATP2A3-210ENST00000572116 NOS1P29475 1434 aa17.23■□□□□ 0.35
ATP2A3-210ENST00000572116 ACIN1Q9UKV3 1341 aaKnown RBP17.21■□□□□ 0.35
ATP2A3-210ENST00000572116 UGGT1Q9NYU2 1555 aa17.21■□□□□ 0.35
ATP2A3-210ENST00000572116 SLC4A1APQ9BWU0 796 aaKnown RBP17.2■□□□□ 0.34
ATP2A3-210ENST00000572116 CLTCL1P53675 1640 aa17.2■□□□□ 0.34
ATP2A3-210ENST00000572116 TRPM2O94759 1503 aa17.19■□□□□ 0.34
ATP2A3-210ENST00000572116 TMEM131LA2VDJ0 1609 aa17.18■□□□□ 0.34
ATP2A3-210ENST00000572116 ADGRB3O60242 1522 aa17.18■□□□□ 0.34
ATP2A3-210ENST00000572116 HSPA2P54652 639 aa17.17■□□□□ 0.34
ATP2A3-210ENST00000572116 PKD2Q13563 968 aa17.17■□□□□ 0.34
ATP2A3-210ENST00000572116 HRCP23327 699 aa17.16■□□□□ 0.34
ATP2A3-210ENST00000572116 PTPRTO14522 1441 aa17.15■□□□□ 0.34
ATP2A3-210ENST00000572116 MPHOSPH9Q99550 1183 aa17.15■□□□□ 0.34
ATP2A3-210ENST00000572116 PLA2R1Q13018 1463 aa17.12■□□□□ 0.33
ATP2A3-210ENST00000572116 IDI1Q13907 227 aa17.11■□□□□ 0.33
ATP2A3-210ENST00000572116 FOXD1Q16676 465 aa17.11■□□□□ 0.33
ATP2A3-210ENST00000572116 SLC52A1Q9NWF4 448 aa17.11■□□□□ 0.33
ATP2A3-210ENST00000572116 IQGAP1P46940 1657 aa17.1■□□□□ 0.33
ATP2A3-210ENST00000572116 PPLO60437 1756 aa17.1■□□□□ 0.33
ATP2A3-210ENST00000572116 NEURL4Q96JN8 1562 aa17.1■□□□□ 0.33
ATP2A3-210ENST00000572116 STAG3Q9UJ98 1225 aa17.09■□□□□ 0.33
ATP2A3-210ENST00000572116 SLIT1O75093 1534 aa17.09■□□□□ 0.33
ATP2A3-210ENST00000572116 IFT172Q9UG01 1749 aa17.09■□□□□ 0.33
ATP2A3-210ENST00000572116 THEMISQ8N1K5 641 aaPredicted RBP17.08■□□□□ 0.32
ATP2A3-210ENST00000572116 ARHGAP23Q9P227 1491 aa17.06■□□□□ 0.32
ATP2A3-210ENST00000572116 CHGAP10645 457 aaKnown RBP17.05■□□□□ 0.32
ATP2A3-210ENST00000572116 PCGF6Q9BYE7 350 aa17.05■□□□□ 0.32
ATP2A3-210ENST00000572116 CCDC144AA2RUR9 1427 aa17.04■□□□□ 0.32
ATP2A3-210ENST00000572116 NCKAP5LQ9HCH0 1330 aa17.03■□□□□ 0.32
ATP2A3-210ENST00000572116 SCAF11Q99590 1463 aaKnown RBP17.02■□□□□ 0.32
ATP2A3-210ENST00000572116 TMEM2Q9UHN6 1383 aa17.02■□□□□ 0.31
ATP2A3-210ENST00000572116 NEXMIFQ5QGS0 1516 aa17.01■□□□□ 0.31
ATP2A3-210ENST00000572116 ANKLE2Q86XL3 938 aa17■□□□□ 0.31
ATP2A3-210ENST00000572116 MED14O60244 1454 aa16.99■□□□□ 0.31
ATP2A3-210ENST00000572116 ZFYVE9O95405 1425 aa16.99■□□□□ 0.31
ATP2A3-210ENST00000572116 RIMS2Q9UQ26 1411 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms