RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 ERBINQ96RT1 1412 aa24.65■■□□□ 1.54
LITAF-210ENST00000571976 ITGAEP38570 1179 aa24.64■■□□□ 1.54
LITAF-210ENST00000571976 CEBPAP49715 358 aaPredicted RBP24.62■■□□□ 1.53
LITAF-210ENST00000571976 ROCK1Q13464 1354 aa24.62■■□□□ 1.53
LITAF-210ENST00000571976 ZMYM3Q14202 1370 aa24.6■■□□□ 1.53
LITAF-210ENST00000571976 RNF17Q9BXT8 1623 aaKnown RBP24.6■■□□□ 1.53
LITAF-210ENST00000571976 MROH2AA6NES4 1674 aa24.59■■□□□ 1.53
LITAF-210ENST00000571976 FAM135AQ9P2D6 1515 aa24.59■■□□□ 1.53
LITAF-210ENST00000571976 CLTCQ00610 1675 aaKnown RBP24.59■■□□□ 1.53
LITAF-210ENST00000571976 WASHC2CQ9Y4E1 1318 aa24.59■■□□□ 1.53
LITAF-210ENST00000571976 C3P01024 1663 aa24.57■■□□□ 1.52
LITAF-210ENST00000571976 KDM5DQ9BY66 1539 aa24.56■■□□□ 1.52
LITAF-210ENST00000571976 ANKRD50Q9ULJ7 1429 aa24.55■■□□□ 1.52
LITAF-210ENST00000571976 MROH1Q8NDA8 1641 aa24.52■■□□□ 1.52
LITAF-210ENST00000571976 NPATQ14207 1427 aa24.5■■□□□ 1.51
LITAF-210ENST00000571976 PRDM15P57071 1507 aaPredicted RBP24.5■■□□□ 1.51
LITAF-210ENST00000571976 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.49■■□□□ 1.51
LITAF-210ENST00000571976 DEPDC5O75140 1603 aa24.49■■□□□ 1.51
LITAF-210ENST00000571976 ZC3H13Q5T200 1668 aaKnown RBP24.49■■□□□ 1.51
LITAF-210ENST00000571976 ABCC3O15438 1527 aa24.48■■□□□ 1.51
LITAF-210ENST00000571976 KANK1Q14678 1352 aa24.48■■□□□ 1.51
LITAF-210ENST00000571976 SETD1BQ9UPS6 1966 aaKnown RBP24.47■■□□□ 1.51
LITAF-210ENST00000571976 LMTK3Q96Q04 1460 aa24.45■■□□□ 1.51
LITAF-210ENST00000571976 PZPP20742 1482 aa24.44■■□□□ 1.5
LITAF-210ENST00000571976 PREX1Q8TCU6 1659 aa24.43■■□□□ 1.5
LITAF-210ENST00000571976 UHRF1BP1Q6BDS2 1440 aa24.43■■□□□ 1.5
LITAF-210ENST00000571976 CEP152O94986 1710 aa24.41■■□□□ 1.5
LITAF-210ENST00000571976 FBXO31Q5XUX0 539 aaPredicted RBP24.4■■□□□ 1.5
LITAF-210ENST00000571976 VWDEQ8N2E2 1590 aa24.4■■□□□ 1.5
LITAF-210ENST00000571976 NAIPQ13075 1403 aa24.39■■□□□ 1.5
LITAF-210ENST00000571976 CAMSAP1Q5T5Y3 1602 aa24.39■■□□□ 1.49
LITAF-210ENST00000571976 LMTK2Q8IWU2 1503 aa24.38■■□□□ 1.49
LITAF-210ENST00000571976 HFM1A2PYH4 1435 aa24.37■■□□□ 1.49
LITAF-210ENST00000571976 ARHGAP31Q2M1Z3 1444 aa24.37■■□□□ 1.49
LITAF-210ENST00000571976 UNC13BO14795 1591 aa24.37■■□□□ 1.49
LITAF-210ENST00000571976 TNRQ92752 1358 aa24.35■■□□□ 1.49
LITAF-210ENST00000571976 HSPA2P54652 639 aa24.34■■□□□ 1.49
LITAF-210ENST00000571976 GCC2Q8IWJ2 1684 aa24.34■■□□□ 1.49
LITAF-210ENST00000571976 NUP155O75694 1391 aa24.31■■□□□ 1.48
LITAF-210ENST00000571976 MYO3AQ8NEV4 1616 aa24.31■■□□□ 1.48
LITAF-210ENST00000571976 ERVK-7P63135 1459 aa24.31■■□□□ 1.48
LITAF-210ENST00000571976 SPATA31D1Q6ZQQ2 1576 aa24.3■■□□□ 1.48
LITAF-210ENST00000571976 EFCAB6Q5THR3 1501 aa24.29■■□□□ 1.48
LITAF-210ENST00000571976 IQGAP3Q86VI3 1631 aa24.27■■□□□ 1.48
LITAF-210ENST00000571976 TET3O43151 1660 aa24.27■■□□□ 1.48
LITAF-210ENST00000571976 NLRP1Q9C000 1473 aa24.26■■□□□ 1.47
LITAF-210ENST00000571976 CEP170BQ9Y4F5 1589 aaPredicted RBP24.26■■□□□ 1.47
LITAF-210ENST00000571976 A2ML1A8K2U0 1454 aa24.26■■□□□ 1.47
LITAF-210ENST00000571976 RPRD2Q5VT52 1461 aaKnown RBP24.26■■□□□ 1.47
LITAF-210ENST00000571976 ZNF142P52746 1687 aaPredicted RBP24.25■■□□□ 1.47
LITAF-210ENST00000571976 CFAP65Q6ZU64 1925 aaKnown RBP24.25■■□□□ 1.47
LITAF-210ENST00000571976 TRIM52Q96A61 297 aa24.2■■□□□ 1.46
LITAF-210ENST00000571976 NOS1P29475 1434 aa24.19■■□□□ 1.46
LITAF-210ENST00000571976 THEMISQ8N1K5 641 aaPredicted RBP24.18■■□□□ 1.46
LITAF-210ENST00000571976 SETD5Q9C0A6 1442 aa24.18■■□□□ 1.46
LITAF-210ENST00000571976 ACIN1Q9UKV3 1341 aaKnown RBP24.17■■□□□ 1.46
LITAF-210ENST00000571976 UGGT1Q9NYU2 1555 aa24.16■■□□□ 1.46
LITAF-210ENST00000571976 E9PCH4 1651 aa24.16■■□□□ 1.46
LITAF-210ENST00000571976 PLA2R1Q13018 1463 aa24.15■■□□□ 1.46
LITAF-210ENST00000571976 SLC52A1Q9NWF4 448 aa24.15■■□□□ 1.46
LITAF-210ENST00000571976 DMRT2Q9Y5R5 561 aa24.14■■□□□ 1.45
LITAF-210ENST00000571976 STRCQ7RTU9 1775 aa24.14■■□□□ 1.45
LITAF-210ENST00000571976 SYNMO15061 1565 aa24.13■■□□□ 1.45
LITAF-210ENST00000571976 IDI1Q13907 227 aa24.13■■□□□ 1.45
LITAF-210ENST00000571976 PKD2Q13563 968 aa24.11■■□□□ 1.45
LITAF-210ENST00000571976 SLC4A1APQ9BWU0 796 aaKnown RBP24.11■■□□□ 1.45
LITAF-210ENST00000571976 STAG3Q9UJ98 1225 aa24.09■■□□□ 1.45
LITAF-210ENST00000571976 NCKAP5LQ9HCH0 1330 aa24.09■■□□□ 1.45
LITAF-210ENST00000571976 RAB3GAP2Q9H2M9 1393 aa24.08■■□□□ 1.45
LITAF-210ENST00000571976 UBR1Q8IWV7 1749 aa24.07■■□□□ 1.44
LITAF-210ENST00000571976 PIK3C2BO00750 1634 aa24.07■■□□□ 1.44
LITAF-210ENST00000571976 ANKLE2Q86XL3 938 aa24.07■■□□□ 1.44
LITAF-210ENST00000571976 PTPRTO14522 1441 aa24.06■■□□□ 1.44
LITAF-210ENST00000571976 KDM5AP29375 1690 aaKnown RBP24.05■■□□□ 1.44
LITAF-210ENST00000571976 HRCP23327 699 aa24.04■■□□□ 1.44
LITAF-210ENST00000571976 MPHOSPH9Q99550 1183 aa24.03■■□□□ 1.44
LITAF-210ENST00000571976 SPHKAPQ2M3C7 1700 aa24.01■■□□□ 1.43
LITAF-210ENST00000571976 ADGRB3O60242 1522 aa24■■□□□ 1.43
LITAF-210ENST00000571976 SLIT1O75093 1534 aa24■■□□□ 1.43
LITAF-210ENST00000571976 POLR1AO95602 1720 aaPredicted RBP23.99■■□□□ 1.43
LITAF-210ENST00000571976 TMEM2Q9UHN6 1383 aa23.99■■□□□ 1.43
LITAF-210ENST00000571976 ARHGAP23Q9P227 1491 aa23.99■■□□□ 1.43
LITAF-210ENST00000571976 EID1Q9Y6B2 187 aa23.98■■□□□ 1.43
LITAF-210ENST00000571976 CHGAP10645 457 aaKnown RBP23.97■■□□□ 1.43
LITAF-210ENST00000571976 TRPM2O94759 1503 aa23.96■■□□□ 1.43
LITAF-210ENST00000571976 MED14O60244 1454 aa23.96■■□□□ 1.43
LITAF-210ENST00000571976 TXNDC2Q86VQ3 553 aa23.96■■□□□ 1.43
LITAF-210ENST00000571976 TMEM131LA2VDJ0 1609 aa23.95■■□□□ 1.43
LITAF-210ENST00000571976 NEURL4Q96JN8 1562 aa23.95■■□□□ 1.43
LITAF-210ENST00000571976 SCAF11Q99590 1463 aaKnown RBP23.94■■□□□ 1.42
LITAF-210ENST00000571976 LTKP29376 864 aa23.94■■□□□ 1.42
LITAF-210ENST00000571976 TRIM26Q12899 539 aaPredicted RBP23.94■■□□□ 1.42
LITAF-210ENST00000571976 FOXD1Q16676 465 aa23.94■■□□□ 1.42
LITAF-210ENST00000571976 NPHP4O75161 1426 aaPredicted RBP23.93■■□□□ 1.42
LITAF-210ENST00000571976 HDGFP51858 240 aaKnown RBP23.92■■□□□ 1.42
LITAF-210ENST00000571976 CLTCL1P53675 1640 aa23.89■■□□□ 1.42
LITAF-210ENST00000571976 MYO5BQ9ULV0 1848 aa23.89■■□□□ 1.41
LITAF-210ENST00000571976 ZFYVE9O95405 1425 aa23.87■■□□□ 1.41
LITAF-210ENST00000571976 RIMS2Q9UQ26 1411 aa23.87■■□□□ 1.41
LITAF-210ENST00000571976 IQGAP1P46940 1657 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms