RNA–Protein interactions for RNA: ENST00000570308.5

MMP2-208, Transcript of matrix metallopeptidase 2, humanhuman

TSL 1 (best) BASIC

Gene MMP2, Length 3,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2-208ENST00000570308 DDRGK1Q96HY6 314 aa13.88□□□□□ -0.19
MMP2-208ENST00000570308 CFDP1Q9UEE9 299 aaPredicted RBP13.88□□□□□ -0.19
MMP2-208ENST00000570308 PZPP20742 1482 aa13.88□□□□□ -0.19
MMP2-208ENST00000570308 CCDC141Q6ZP82 1450 aa13.88□□□□□ -0.19
MMP2-208ENST00000570308 RSPH4AQ5TD94 716 aa13.88□□□□□ -0.19
MMP2-208ENST00000570308 ANKRD30AQ9BXX3 1397 aa13.87□□□□□ -0.19
MMP2-208ENST00000570308 TCERG1O14776 1098 aaKnown RBP13.86□□□□□ -0.19
MMP2-208ENST00000570308 HSP90AA1P07900 732 aaKnown RBP13.86□□□□□ -0.19
MMP2-208ENST00000570308 C9orf84Q5VXU9 1444 aa13.86□□□□□ -0.19
MMP2-208ENST00000570308 UNC13BO14795 1591 aa13.86□□□□□ -0.19
MMP2-208ENST00000570308 FAM9BQ8IZU0 186 aa13.86□□□□□ -0.19
MMP2-208ENST00000570308 RPRD2Q5VT52 1461 aaKnown RBP13.85□□□□□ -0.19
MMP2-208ENST00000570308 ZNF644Q9H582 1327 aaPredicted RBP13.84□□□□□ -0.19
MMP2-208ENST00000570308 ANKRD30BQ9BXX2 1392 aa13.84□□□□□ -0.19
MMP2-208ENST00000570308 PDE4AP27815 886 aa13.84□□□□□ -0.19
MMP2-208ENST00000570308 NAP1L5Q96NT1 182 aaPredicted RBP13.83□□□□□ -0.2
MMP2-208ENST00000570308 ABCA9Q8IUA7 1624 aa13.83□□□□□ -0.2
MMP2-208ENST00000570308 PLCH2O75038 1416 aa13.83□□□□□ -0.2
MMP2-208ENST00000570308 ABCC1P33527 1531 aa13.82□□□□□ -0.2
MMP2-208ENST00000570308 TEX14Q8IWB6 1497 aa13.82□□□□□ -0.2
MMP2-208ENST00000570308 RRP7BPQ9NSQ0 103 aa13.81□□□□□ -0.2
MMP2-208ENST00000570308 MAGI2Q86UL8 1455 aa13.81□□□□□ -0.2
MMP2-208ENST00000570308 TONSLQ96HA7 1378 aa13.81□□□□□ -0.2
MMP2-208ENST00000570308 DCAF11Q8TEB1 546 aa13.81□□□□□ -0.2
MMP2-208ENST00000570308 MPHOSPH9Q99550 1183 aa13.81□□□□□ -0.2
MMP2-208ENST00000570308 ANKRD50Q9ULJ7 1429 aa13.8□□□□□ -0.2
MMP2-208ENST00000570308 BACH2Q9BYV9 841 aa13.8□□□□□ -0.2
MMP2-208ENST00000570308 ARID3CA6NKF2 412 aa13.79□□□□□ -0.2
MMP2-208ENST00000570308 SYCP2Q9BX26 1530 aa13.79□□□□□ -0.2
MMP2-208ENST00000570308 A0A0U1RQG5 324 aaPredicted RBP13.79□□□□□ -0.2
MMP2-208ENST00000570308 MRS2Q9HD23 443 aa13.79□□□□□ -0.2
MMP2-208ENST00000570308 ARHGAP5Q13017 1502 aa13.79□□□□□ -0.2
MMP2-208ENST00000570308 MS4A1P11836 297 aa13.78□□□□□ -0.2
MMP2-208ENST00000570308 SMG6Q86US8 1419 aaKnown RBP13.78□□□□□ -0.2
MMP2-208ENST00000570308 IQGAP3Q86VI3 1631 aa13.78□□□□□ -0.2
MMP2-208ENST00000570308 RRAGDQ9NQL2 400 aaPredicted RBP13.77□□□□□ -0.2
MMP2-208ENST00000570308 WDR7Q9Y4E6 1490 aa13.77□□□□□ -0.2
MMP2-208ENST00000570308 CHIC2Q9UKJ5 165 aa13.77□□□□□ -0.21
MMP2-208ENST00000570308 CCDC184Q52MB2 194 aa13.77□□□□□ -0.21
MMP2-208ENST00000570308 PNNQ9H307 717 aaKnown RBP13.77□□□□□ -0.21
MMP2-208ENST00000570308 RNF123Q5XPI4 1314 aa13.76□□□□□ -0.21
MMP2-208ENST00000570308 DUOX2Q9NRD8 1548 aa13.76□□□□□ -0.21
MMP2-208ENST00000570308 POLR1AO95602 1720 aaPredicted RBP13.76□□□□□ -0.21
MMP2-208ENST00000570308 ARHGEF12Q9NZN5 1544 aa13.76□□□□□ -0.21
MMP2-208ENST00000570308 RBM10P98175 930 aaKnown RBP13.76□□□□□ -0.21
MMP2-208ENST00000570308 NUDCQ9Y266 331 aa13.76□□□□□ -0.21
MMP2-208ENST00000570308 RTEL1-TNFRSF6BF6WH68 1400 aa13.76□□□□□ -0.21
MMP2-208ENST00000570308 ERBINQ96RT1 1412 aa13.75□□□□□ -0.21
MMP2-208ENST00000570308 DEPDC5O75140 1603 aa13.73□□□□□ -0.21
MMP2-208ENST00000570308 KIF15Q9NS87 1388 aa13.73□□□□□ -0.21
MMP2-208ENST00000570308 INO80Q9ULG1 1556 aaPredicted RBP13.73□□□□□ -0.21
MMP2-208ENST00000570308 CFAP74Q9C0B2 1584 aa13.72□□□□□ -0.21
MMP2-208ENST00000570308 ATP10AO60312 1499 aa13.72□□□□□ -0.21
MMP2-208ENST00000570308 AAMPQ13685 434 aa13.71□□□□□ -0.21
MMP2-208ENST00000570308 L1TD1Q5T7N2 865 aaKnown RBP13.71□□□□□ -0.21
MMP2-208ENST00000570308 UHRF1BP1Q6BDS2 1440 aa13.71□□□□□ -0.21
MMP2-208ENST00000570308 EIF2AK4Q9P2K8 1649 aaKnown RBP13.71□□□□□ -0.21
MMP2-208ENST00000570308 FAM135AQ9P2D6 1515 aa13.71□□□□□ -0.22
MMP2-208ENST00000570308 FGD1P98174 961 aa13.7□□□□□ -0.22
MMP2-208ENST00000570308 PRKRIP1Q9H875 184 aaPredicted RBP13.7□□□□□ -0.22
MMP2-208ENST00000570308 ZFYVE16Q7Z3T8 1539 aa13.7□□□□□ -0.22
MMP2-208ENST00000570308 FRAT2O75474 233 aaPredicted RBP13.7□□□□□ -0.22
MMP2-208ENST00000570308 TSPY4P0CV99 314 aa13.69□□□□□ -0.22
MMP2-208ENST00000570308 TSPY10P0CW01 314 aa13.69□□□□□ -0.22
MMP2-208ENST00000570308 SLC4A3P48751 1232 aa13.68□□□□□ -0.22
MMP2-208ENST00000570308 CNTLNQ9NXG0 1405 aa13.68□□□□□ -0.22
MMP2-208ENST00000570308 PDE4CQ08493 712 aa13.67□□□□□ -0.22
MMP2-208ENST00000570308 NEURL4Q96JN8 1562 aa13.67□□□□□ -0.22
MMP2-208ENST00000570308 BCORL1Q5H9F3 1711 aa13.67□□□□□ -0.22
MMP2-208ENST00000570308 VWDEQ8N2E2 1590 aa13.67□□□□□ -0.22
MMP2-208ENST00000570308 CLCN1P35523 988 aa13.66□□□□□ -0.22
MMP2-208ENST00000570308 SLC4A1APQ9BWU0 796 aaKnown RBP13.65□□□□□ -0.22
MMP2-208ENST00000570308 SPATA31E1Q6ZUB1 1445 aa13.65□□□□□ -0.22
MMP2-208ENST00000570308 LAMC1P11047 1609 aa13.65□□□□□ -0.22
MMP2-208ENST00000570308 EFCAB2Q5VUJ9 269 aa13.65□□□□□ -0.22
MMP2-208ENST00000570308 ZNF777Q9ULD5 760 aaPredicted RBP13.65□□□□□ -0.22
MMP2-208ENST00000570308 HNRNPMP52272 730 aaKnown RBP eCLIP13.64□□□□□ -0.23
MMP2-208ENST00000570308 ASXL2Q76L83 1435 aa13.63□□□□□ -0.23
MMP2-208ENST00000570308 HSPA5P11021 654 aaKnown RBP13.62□□□□□ -0.23
MMP2-208ENST00000570308 OSCARQ8IYS5 282 aa13.62□□□□□ -0.23
MMP2-208ENST00000570308 RALGAPBQ86X10 1494 aa13.62□□□□□ -0.23
MMP2-208ENST00000570308 CALD1Q05682 793 aaKnown RBP13.62□□□□□ -0.23
MMP2-208ENST00000570308 KDM5CP41229 1560 aa13.62□□□□□ -0.23
MMP2-208ENST00000570308 NUP155O75694 1391 aa13.62□□□□□ -0.23
MMP2-208ENST00000570308 ATP7AQ04656 1500 aa13.61□□□□□ -0.23
MMP2-208ENST00000570308 PDCL3Q9H2J4 239 aa13.61□□□□□ -0.23
MMP2-208ENST00000570308 FANCAO15360 1455 aa13.61□□□□□ -0.23
MMP2-208ENST00000570308 TRAPPC8Q9Y2L5 1435 aa13.61□□□□□ -0.23
MMP2-208ENST00000570308 EXOC6Q8TAG9 804 aa13.61□□□□□ -0.23
MMP2-208ENST00000570308 L3MBTL2Q969R5 705 aa13.61□□□□□ -0.23
MMP2-208ENST00000570308 PRDM15P57071 1507 aaPredicted RBP13.6□□□□□ -0.23
MMP2-208ENST00000570308 TET3O43151 1660 aa13.6□□□□□ -0.23
MMP2-208ENST00000570308 CENPJQ9HC77 1338 aaPredicted RBP13.6□□□□□ -0.23
MMP2-208ENST00000570308 EIF4G2P78344 907 aaKnown RBP eCLIP13.59□□□□□ -0.23
MMP2-208ENST00000570308 RNF17Q9BXT8 1623 aaKnown RBP13.59□□□□□ -0.23
MMP2-208ENST00000570308 GLI2P10070 1586 aa13.59□□□□□ -0.23
MMP2-208ENST00000570308 RRP1P56182 461 aaKnown RBP13.58□□□□□ -0.24
MMP2-208ENST00000570308 POGKQ9P215 609 aa13.58□□□□□ -0.24
MMP2-208ENST00000570308 PKD2Q13563 968 aa13.58□□□□□ -0.24
MMP2-208ENST00000570308 LMTK2Q8IWU2 1503 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms