RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 ERBINQ96RT1 1412 aa8.51□□□□□ -1.05
CYLD-216ENST00000569891 PPP1R15AO75807 674 aaPredicted RBP8.51□□□□□ -1.05
CYLD-216ENST00000569891 SYCP2Q9BX26 1530 aa8.5□□□□□ -1.05
CYLD-216ENST00000569891 ALKQ9UM73 1620 aa8.5□□□□□ -1.05
CYLD-216ENST00000569891 FANCAO15360 1455 aa8.5□□□□□ -1.05
CYLD-216ENST00000569891 MBD5Q9P267 1494 aa8.5□□□□□ -1.05
CYLD-216ENST00000569891 STAC3Q96MF2 364 aa8.49□□□□□ -1.05
CYLD-216ENST00000569891 PIK3C2BO00750 1634 aa8.48□□□□□ -1.05
CYLD-216ENST00000569891 ABCC1P33527 1531 aa8.48□□□□□ -1.05
CYLD-216ENST00000569891 SIN3AQ96ST3 1273 aa8.48□□□□□ -1.05
CYLD-216ENST00000569891 WDFY3Q8IZQ1 3526 aa8.48□□□□□ -1.05
CYLD-216ENST00000569891 KDM5DQ9BY66 1539 aa8.48□□□□□ -1.05
CYLD-216ENST00000569891 ADGRL1O94910 1474 aa8.48□□□□□ -1.05
CYLD-216ENST00000569891 PKD2Q13563 968 aa8.48□□□□□ -1.05
CYLD-216ENST00000569891 CD109Q6YHK3 1445 aa8.48□□□□□ -1.05
CYLD-216ENST00000569891 CAMSAP1Q5T5Y3 1602 aa8.47□□□□□ -1.05
CYLD-216ENST00000569891 NEO1Q92859 1461 aa8.47□□□□□ -1.05
CYLD-216ENST00000569891 KDM5AP29375 1690 aaKnown RBP8.47□□□□□ -1.05
CYLD-216ENST00000569891 ZNF518AQ6AHZ1 1483 aa8.47□□□□□ -1.05
CYLD-216ENST00000569891 ANKRD30BQ9BXX2 1392 aa8.46□□□□□ -1.05
CYLD-216ENST00000569891 EYSQ5T1H1 3165 aa8.46□□□□□ -1.05
CYLD-216ENST00000569891 SCAPERQ9BY12 1400 aa8.46□□□□□ -1.06
CYLD-216ENST00000569891 EIF4G2P78344 907 aaKnown RBP eCLIP8.46□□□□□ -1.06
CYLD-216ENST00000569891 NRXN3Q9Y4C0 1643 aa8.46□□□□□ -1.06
CYLD-216ENST00000569891 RPRD2Q5VT52 1461 aaKnown RBP8.46□□□□□ -1.06
CYLD-216ENST00000569891 MAGI2Q86UL8 1455 aa8.45□□□□□ -1.06
CYLD-216ENST00000569891 TEX14Q8IWB6 1497 aa8.44□□□□□ -1.06
CYLD-216ENST00000569891 STRCQ7RTU9 1775 aa8.44□□□□□ -1.06
CYLD-216ENST00000569891 CCDC144AA2RUR9 1427 aa8.44□□□□□ -1.06
CYLD-216ENST00000569891 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.44□□□□□ -1.06
CYLD-216ENST00000569891 SLC24A1O60721 1099 aa8.43□□□□□ -1.06
CYLD-216ENST00000569891 CYB5RLQ6IPT4 315 aa8.43□□□□□ -1.06
CYLD-216ENST00000569891 PZPP20742 1482 aa8.43□□□□□ -1.06
CYLD-216ENST00000569891 ATP7AQ04656 1500 aa8.43□□□□□ -1.06
CYLD-216ENST00000569891 SPHKAPQ2M3C7 1700 aa8.42□□□□□ -1.06
CYLD-216ENST00000569891 UNC13BO14795 1591 aa8.42□□□□□ -1.06
CYLD-216ENST00000569891 RNF17Q9BXT8 1623 aaKnown RBP8.42□□□□□ -1.06
CYLD-216ENST00000569891 ZC3H13Q5T200 1668 aaKnown RBP8.42□□□□□ -1.06
CYLD-216ENST00000569891 TSPOAP1O95153 1857 aa8.42□□□□□ -1.06
CYLD-216ENST00000569891 LAMA2P24043 3122 aaKnown RBP8.42□□□□□ -1.06
CYLD-216ENST00000569891 DHX29Q7Z478 1369 aaKnown RBP8.42□□□□□ -1.06
CYLD-216ENST00000569891 E9PCH4 1651 aa8.41□□□□□ -1.06
CYLD-216ENST00000569891 FAM135AQ9P2D6 1515 aa8.41□□□□□ -1.06
CYLD-216ENST00000569891 EIF2AK4Q9P2K8 1649 aaKnown RBP8.41□□□□□ -1.06
CYLD-216ENST00000569891 ADAMTSL3P82987 1691 aa8.41□□□□□ -1.06
CYLD-216ENST00000569891 ANP32CO43423 234 aa8.4□□□□□ -1.06
CYLD-216ENST00000569891 L3MBTL2Q969R5 705 aa8.4□□□□□ -1.06
CYLD-216ENST00000569891 TRAPPC8Q9Y2L5 1435 aa8.4□□□□□ -1.06
CYLD-216ENST00000569891 CRYBG1Q9Y4K1 1723 aa8.4□□□□□ -1.06
CYLD-216ENST00000569891 FER1L4A9Z1Z3 1794 aa8.4□□□□□ -1.07
CYLD-216ENST00000569891 ZFYVE16Q7Z3T8 1539 aa8.39□□□□□ -1.07
CYLD-216ENST00000569891 IQGAP3Q86VI3 1631 aa8.39□□□□□ -1.07
CYLD-216ENST00000569891 MLH3Q9UHC1 1453 aa8.39□□□□□ -1.07
CYLD-216ENST00000569891 ARID4BQ4LE39 1312 aaPredicted RBP8.39□□□□□ -1.07
CYLD-216ENST00000569891 POGZQ7Z3K3 1410 aa8.39□□□□□ -1.07
CYLD-216ENST00000569891 KIF3BO15066 747 aa8.39□□□□□ -1.07
CYLD-216ENST00000569891 AFAP1Q8N556 730 aa8.39□□□□□ -1.07
CYLD-216ENST00000569891 PPP6R1Q9UPN7 881 aa8.38□□□□□ -1.07
CYLD-216ENST00000569891 ZMYM4Q5VZL5 1548 aa8.38□□□□□ -1.07
CYLD-216ENST00000569891 A2MP01023 1474 aa8.37□□□□□ -1.07
CYLD-216ENST00000569891 FAM69CQ0P6D2 419 aa8.37□□□□□ -1.07
CYLD-216ENST00000569891 ATP10AO60312 1499 aa8.37□□□□□ -1.07
CYLD-216ENST00000569891 HECW2Q9P2P5 1572 aa8.37□□□□□ -1.07
CYLD-216ENST00000569891 ROCK2O75116 1388 aaKnown RBP8.36□□□□□ -1.07
CYLD-216ENST00000569891 DIP2CQ9Y2E4 1556 aa8.36□□□□□ -1.07
CYLD-216ENST00000569891 FOXD1Q16676 465 aa8.36□□□□□ -1.07
CYLD-216ENST00000569891 ZNF326Q5BKZ1 582 aaKnown RBP8.36□□□□□ -1.07
CYLD-216ENST00000569891 REV3LO60673 3130 aa8.35□□□□□ -1.07
CYLD-216ENST00000569891 ESF1Q9H501 851 aaKnown RBP8.35□□□□□ -1.07
CYLD-216ENST00000569891 CDCA8Q53HL2 280 aa8.35□□□□□ -1.07
CYLD-216ENST00000569891 UHRF1BP1Q6BDS2 1440 aa8.34□□□□□ -1.07
CYLD-216ENST00000569891 CARD11Q9BXL7 1154 aa8.34□□□□□ -1.07
CYLD-216ENST00000569891 TET3O43151 1660 aa8.34□□□□□ -1.07
CYLD-216ENST00000569891 DCAF11Q8TEB1 546 aa8.34□□□□□ -1.07
CYLD-216ENST00000569891 C3P01024 1663 aa8.34□□□□□ -1.08
CYLD-216ENST00000569891 REREQ9P2R6 1566 aa8.33□□□□□ -1.08
CYLD-216ENST00000569891 HSPA5P11021 654 aaKnown RBP8.33□□□□□ -1.08
CYLD-216ENST00000569891 CEP170BQ9Y4F5 1589 aaPredicted RBP8.33□□□□□ -1.08
CYLD-216ENST00000569891 EIF3AQ14152 1382 aaKnown RBP8.33□□□□□ -1.08
CYLD-216ENST00000569891 WASHC2CQ9Y4E1 1318 aa8.33□□□□□ -1.08
CYLD-216ENST00000569891 CCER2I3L3R5 266 aa8.33□□□□□ -1.08
CYLD-216ENST00000569891 RALGAPBQ86X10 1494 aa8.32□□□□□ -1.08
CYLD-216ENST00000569891 SPTBN5Q9NRC6 3674 aaKnown RBP8.32□□□□□ -1.08
CYLD-216ENST00000569891 SYNMO15061 1565 aa8.32□□□□□ -1.08
CYLD-216ENST00000569891 ZNF142P52746 1687 aaPredicted RBP8.32□□□□□ -1.08
CYLD-216ENST00000569891 DDX10Q13206 875 aaKnown RBP8.32□□□□□ -1.08
CYLD-216ENST00000569891 PRDM15P57071 1507 aaPredicted RBP8.32□□□□□ -1.08
CYLD-216ENST00000569891 RPGRIP1LQ68CZ1 1315 aa8.31□□□□□ -1.08
CYLD-216ENST00000569891 LMTK2Q8IWU2 1503 aa8.31□□□□□ -1.08
CYLD-216ENST00000569891 KDM2AQ9Y2K7 1162 aa8.31□□□□□ -1.08
CYLD-216ENST00000569891 TRPM2O94759 1503 aa8.3□□□□□ -1.08
CYLD-216ENST00000569891 MKI67P46013 3256 aaKnown RBP8.3□□□□□ -1.08
CYLD-216ENST00000569891 NEURL4Q96JN8 1562 aa8.3□□□□□ -1.08
CYLD-216ENST00000569891 MYO15AQ9UKN7 3530 aa8.3□□□□□ -1.08
CYLD-216ENST00000569891 USP47Q96K76 1375 aa8.3□□□□□ -1.08
CYLD-216ENST00000569891 GGT6Q6P531 493 aa8.3□□□□□ -1.08
CYLD-216ENST00000569891 CNTLNQ9NXG0 1405 aa8.3□□□□□ -1.08
CYLD-216ENST00000569891 MIER1Q8N108 512 aa8.3□□□□□ -1.08
CYLD-216ENST00000569891 POLR1AO95602 1720 aaPredicted RBP8.3□□□□□ -1.08
CYLD-216ENST00000569891 RGL3Q3MIN7 710 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms