RNA–Protein interactions for RNA: ENST00000569506.1

NEIL1-223, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-223ENST00000569506 ACIN1Q9UKV3 1341 aaKnown RBP24.19■■□□□ 1.46
NEIL1-223ENST00000569506 MLECQ14165 292 aa24.18■■□□□ 1.46
NEIL1-223ENST00000569506 ATP10AO60312 1499 aa24.17■■□□□ 1.46
NEIL1-223ENST00000569506 ANKRD50Q9ULJ7 1429 aa24.16■■□□□ 1.46
NEIL1-223ENST00000569506 KIDINS220Q9ULH0 1771 aa24.16■■□□□ 1.46
NEIL1-223ENST00000569506 DUOX2Q9NRD8 1548 aa24.15■■□□□ 1.46
NEIL1-223ENST00000569506 ERBINQ96RT1 1412 aa24.1■■□□□ 1.45
NEIL1-223ENST00000569506 STRCQ7RTU9 1775 aa24.1■■□□□ 1.45
NEIL1-223ENST00000569506 DHX29Q7Z478 1369 aaKnown RBP24.08■■□□□ 1.45
NEIL1-223ENST00000569506 DMRT2Q9Y5R5 561 aa24.07■■□□□ 1.44
NEIL1-223ENST00000569506 SETD1BQ9UPS6 1966 aaKnown RBP24.06■■□□□ 1.44
NEIL1-223ENST00000569506 A2MP01023 1474 aa24.06■■□□□ 1.44
NEIL1-223ENST00000569506 ABCA6Q8N139 1617 aa24.06■■□□□ 1.44
NEIL1-223ENST00000569506 DIP2CQ9Y2E4 1556 aa24.04■■□□□ 1.44
NEIL1-223ENST00000569506 UHRF1BP1Q6BDS2 1440 aa24.04■■□□□ 1.44
NEIL1-223ENST00000569506 DISP3Q9P2K9 1392 aa24.03■■□□□ 1.44
NEIL1-223ENST00000569506 CEBPAP49715 358 aaPredicted RBP24.03■■□□□ 1.44
NEIL1-223ENST00000569506 TRIM52Q96A61 297 aa24.03■■□□□ 1.44
NEIL1-223ENST00000569506 REREQ9P2R6 1566 aa24.02■■□□□ 1.44
NEIL1-223ENST00000569506 EIF2AK4Q9P2K8 1649 aaKnown RBP24■■□□□ 1.43
NEIL1-223ENST00000569506 DHX57Q6P158 1386 aaKnown RBP23.99■■□□□ 1.43
NEIL1-223ENST00000569506 CCER1Q8TC90 406 aaPredicted RBP23.98■■□□□ 1.43
NEIL1-223ENST00000569506 ILDR2Q71H61 639 aa23.97■■□□□ 1.43
NEIL1-223ENST00000569506 C3P01024 1663 aa23.96■■□□□ 1.43
NEIL1-223ENST00000569506 PTPRTO14522 1441 aa23.96■■□□□ 1.43
NEIL1-223ENST00000569506 SOCS7O14512 581 aa23.96■■□□□ 1.43
NEIL1-223ENST00000569506 UNC13BO14795 1591 aa23.95■■□□□ 1.43
NEIL1-223ENST00000569506 KIF3BO15066 747 aa23.95■■□□□ 1.42
NEIL1-223ENST00000569506 NUP155O75694 1391 aa23.94■■□□□ 1.42
NEIL1-223ENST00000569506 KDM5DQ9BY66 1539 aa23.94■■□□□ 1.42
NEIL1-223ENST00000569506 SPATA31D1Q6ZQQ2 1576 aa23.93■■□□□ 1.42
NEIL1-223ENST00000569506 AGLP35573 1532 aa23.91■■□□□ 1.42
NEIL1-223ENST00000569506 MPHOSPH9Q99550 1183 aa23.91■■□□□ 1.42
NEIL1-223ENST00000569506 DEPDC5O75140 1603 aa23.9■■□□□ 1.42
NEIL1-223ENST00000569506 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.89■■□□□ 1.41
NEIL1-223ENST00000569506 RNF17Q9BXT8 1623 aaKnown RBP23.88■■□□□ 1.41
NEIL1-223ENST00000569506 PZPP20742 1482 aa23.88■■□□□ 1.41
NEIL1-223ENST00000569506 IQSEC2Q5JU85 1478 aa23.88■■□□□ 1.41
NEIL1-223ENST00000569506 CLSPNQ9HAW4 1339 aa23.88■■□□□ 1.41
NEIL1-223ENST00000569506 SLC4A1APQ9BWU0 796 aaKnown RBP23.88■■□□□ 1.41
NEIL1-223ENST00000569506 KANK1Q14678 1352 aa23.88■■□□□ 1.41
NEIL1-223ENST00000569506 LTBP4Q8N2S1 1624 aa23.88■■□□□ 1.41
NEIL1-223ENST00000569506 PRDM15P57071 1507 aaPredicted RBP23.85■■□□□ 1.41
NEIL1-223ENST00000569506 IQGAP3Q86VI3 1631 aa23.85■■□□□ 1.41
NEIL1-223ENST00000569506 FAM135AQ9P2D6 1515 aa23.84■■□□□ 1.41
NEIL1-223ENST00000569506 ESF1Q9H501 851 aaKnown RBP23.84■■□□□ 1.41
NEIL1-223ENST00000569506 CNTLNQ9NXG0 1405 aa23.84■■□□□ 1.41
NEIL1-223ENST00000569506 GGT6Q6P531 493 aa23.83■■□□□ 1.41
NEIL1-223ENST00000569506 MROH1Q8NDA8 1641 aa23.83■■□□□ 1.41
NEIL1-223ENST00000569506 VWDEQ8N2E2 1590 aa23.82■■□□□ 1.4
NEIL1-223ENST00000569506 PPP6R1Q9UPN7 881 aa23.8■■□□□ 1.4
NEIL1-223ENST00000569506 PKD2Q13563 968 aa23.79■■□□□ 1.4
NEIL1-223ENST00000569506 MROH2AA6NES4 1674 aa23.79■■□□□ 1.4
NEIL1-223ENST00000569506 LMTK2Q8IWU2 1503 aa23.77■■□□□ 1.4
NEIL1-223ENST00000569506 NPATQ14207 1427 aa23.76■■□□□ 1.39
NEIL1-223ENST00000569506 WASHC2CQ9Y4E1 1318 aa23.75■■□□□ 1.39
NEIL1-223ENST00000569506 CAMSAP1Q5T5Y3 1602 aa23.74■■□□□ 1.39
NEIL1-223ENST00000569506 TET3O43151 1660 aa23.73■■□□□ 1.39
NEIL1-223ENST00000569506 ZEB1P37275 1124 aaPredicted RBP23.72■■□□□ 1.39
NEIL1-223ENST00000569506 FOXD1Q16676 465 aa23.72■■□□□ 1.39
NEIL1-223ENST00000569506 ABCC3O15438 1527 aa23.72■■□□□ 1.39
NEIL1-223ENST00000569506 ZC3H13Q5T200 1668 aaKnown RBP23.71■■□□□ 1.39
NEIL1-223ENST00000569506 ANKRD30BQ9BXX2 1392 aa23.7■■□□□ 1.38
NEIL1-223ENST00000569506 CEP152O94986 1710 aa23.68■■□□□ 1.38
NEIL1-223ENST00000569506 ZNF142P52746 1687 aaPredicted RBP23.68■■□□□ 1.38
NEIL1-223ENST00000569506 EFCAB6Q5THR3 1501 aa23.68■■□□□ 1.38
NEIL1-223ENST00000569506 ZMYM3Q14202 1370 aa23.65■■□□□ 1.38
NEIL1-223ENST00000569506 E9PCH4 1651 aa23.65■■□□□ 1.38
NEIL1-223ENST00000569506 MYO3AQ8NEV4 1616 aa23.65■■□□□ 1.38
NEIL1-223ENST00000569506 PLA2R1Q13018 1463 aa23.64■■□□□ 1.38
NEIL1-223ENST00000569506 RPRD2Q5VT52 1461 aaKnown RBP23.64■■□□□ 1.38
NEIL1-223ENST00000569506 ARHGAP31Q2M1Z3 1444 aa23.64■■□□□ 1.37
NEIL1-223ENST00000569506 CLTCQ00610 1675 aaKnown RBP23.64■■□□□ 1.37
NEIL1-223ENST00000569506 SIN3AQ96ST3 1273 aa23.63■■□□□ 1.37
NEIL1-223ENST00000569506 CEP170BQ9Y4F5 1589 aaPredicted RBP23.61■■□□□ 1.37
NEIL1-223ENST00000569506 ZNF335Q9H4Z2 1342 aaPredicted RBP23.6■■□□□ 1.37
NEIL1-223ENST00000569506 NEUROD1Q13562 356 aa23.6■■□□□ 1.37
NEIL1-223ENST00000569506 NCKAP5LQ9HCH0 1330 aa23.59■■□□□ 1.37
NEIL1-223ENST00000569506 UBAP1LF5GYI3 381 aa23.59■■□□□ 1.37
NEIL1-223ENST00000569506 TIMELESSQ9UNS1 1208 aa23.58■■□□□ 1.37
NEIL1-223ENST00000569506 TRPM2O94759 1503 aa23.55■■□□□ 1.36
NEIL1-223ENST00000569506 CCDC144AA2RUR9 1427 aa23.55■■□□□ 1.36
NEIL1-223ENST00000569506 SPHKAPQ2M3C7 1700 aa23.55■■□□□ 1.36
NEIL1-223ENST00000569506 NOS1P29475 1434 aa23.51■■□□□ 1.35
NEIL1-223ENST00000569506 TONSLQ96HA7 1378 aa23.5■■□□□ 1.35
NEIL1-223ENST00000569506 A2ML1A8K2U0 1454 aa23.47■■□□□ 1.35
NEIL1-223ENST00000569506 ERVK-7P63135 1459 aa23.47■■□□□ 1.35
NEIL1-223ENST00000569506 CFAP65Q6ZU64 1925 aaKnown RBP23.47■■□□□ 1.35
NEIL1-223ENST00000569506 POLR1AO95602 1720 aaPredicted RBP23.45■■□□□ 1.34
NEIL1-223ENST00000569506 FBXO31Q5XUX0 539 aaPredicted RBP23.44■■□□□ 1.34
NEIL1-223ENST00000569506 SLC52A1Q9NWF4 448 aa23.44■■□□□ 1.34
NEIL1-223ENST00000569506 CLTCL1P53675 1640 aa23.44■■□□□ 1.34
NEIL1-223ENST00000569506 SYNMO15061 1565 aa23.42■■□□□ 1.34
NEIL1-223ENST00000569506 MED1Q15648 1581 aaPredicted RBP23.42■■□□□ 1.34
NEIL1-223ENST00000569506 CPS1P31327 1500 aa23.42■■□□□ 1.34
NEIL1-223ENST00000569506 NEURL4Q96JN8 1562 aa23.4■■□□□ 1.34
NEIL1-223ENST00000569506 L3MBTL2Q969R5 705 aa23.39■■□□□ 1.33
NEIL1-223ENST00000569506 PIK3C2BO00750 1634 aa23.39■■□□□ 1.33
NEIL1-223ENST00000569506 UGGT1Q9NYU2 1555 aa23.39■■□□□ 1.33
NEIL1-223ENST00000569506 SPATA31E1Q6ZUB1 1445 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms