RNA–Protein interactions for RNA: ENST00000569380.5

SPSB3-211, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,781 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-211ENST00000569380 KIF3BO15066 747 aa30.16■■■□□ 2.42
SPSB3-211ENST00000569380 ADAMTSL3P82987 1691 aa30.15■■■□□ 2.42
SPSB3-211ENST00000569380 PZPP20742 1482 aa30.15■■■□□ 2.42
SPSB3-211ENST00000569380 BCORL1Q5H9F3 1711 aa30.15■■■□□ 2.42
SPSB3-211ENST00000569380 ATP10AO60312 1499 aa30.15■■■□□ 2.42
SPSB3-211ENST00000569380 NUP155O75694 1391 aa30.14■■■□□ 2.42
SPSB3-211ENST00000569380 EIF2AK4Q9P2K8 1649 aaKnown RBP30.14■■■□□ 2.41
SPSB3-211ENST00000569380 MPHOSPH9Q99550 1183 aa30.1■■■□□ 2.41
SPSB3-211ENST00000569380 MROH1Q8NDA8 1641 aa30.1■■■□□ 2.41
SPSB3-211ENST00000569380 DEPDC5O75140 1603 aa30.1■■■□□ 2.41
SPSB3-211ENST00000569380 MADDQ8WXG6 1647 aa30.08■■■□□ 2.41
SPSB3-211ENST00000569380 FOXD1Q16676 465 aa30.08■■■□□ 2.41
SPSB3-211ENST00000569380 KDM5DQ9BY66 1539 aa30.08■■■□□ 2.41
SPSB3-211ENST00000569380 SLC4A1APQ9BWU0 796 aaKnown RBP30.06■■■□□ 2.4
SPSB3-211ENST00000569380 FAM135AQ9P2D6 1515 aa30.05■■■□□ 2.4
SPSB3-211ENST00000569380 PTPRMP28827 1452 aa30.05■■■□□ 2.4
SPSB3-211ENST00000569380 RNF17Q9BXT8 1623 aaKnown RBP30.05■■■□□ 2.4
SPSB3-211ENST00000569380 IQGAP3Q86VI3 1631 aa30.03■■■□□ 2.4
SPSB3-211ENST00000569380 REREQ9P2R6 1566 aa30.03■■■□□ 2.4
SPSB3-211ENST00000569380 GGT6Q6P531 493 aa30.03■■■□□ 2.4
SPSB3-211ENST00000569380 PRDM15P57071 1507 aaPredicted RBP30.02■■■□□ 2.4
SPSB3-211ENST00000569380 MLECQ14165 292 aa29.98■■■□□ 2.39
SPSB3-211ENST00000569380 VWDEQ8N2E2 1590 aa29.98■■■□□ 2.39
SPSB3-211ENST00000569380 PKD2Q13563 968 aa29.98■■■□□ 2.39
SPSB3-211ENST00000569380 CEP152O94986 1710 aa29.97■■■□□ 2.39
SPSB3-211ENST00000569380 ACIN1Q9UKV3 1341 aaKnown RBP29.96■■■□□ 2.39
SPSB3-211ENST00000569380 RIMS1Q86UR5 1692 aaKnown RBP29.96■■■□□ 2.39
SPSB3-211ENST00000569380 AGLP35573 1532 aa29.96■■■□□ 2.39
SPSB3-211ENST00000569380 SIN3AQ96ST3 1273 aa29.92■■■□□ 2.38
SPSB3-211ENST00000569380 KANK1Q14678 1352 aa29.91■■■□□ 2.38
SPSB3-211ENST00000569380 E9PCH4 1651 aa29.88■■■□□ 2.37
SPSB3-211ENST00000569380 ABCC3O15438 1527 aa29.87■■■□□ 2.37
SPSB3-211ENST00000569380 TET3O43151 1660 aa29.87■■■□□ 2.37
SPSB3-211ENST00000569380 FER1L4A9Z1Z3 1794 aa29.86■■■□□ 2.37
SPSB3-211ENST00000569380 CLSPNQ9HAW4 1339 aa29.85■■■□□ 2.37
SPSB3-211ENST00000569380 WASHC2CQ9Y4E1 1318 aa29.85■■■□□ 2.37
SPSB3-211ENST00000569380 ANKRD30BQ9BXX2 1392 aa29.84■■■□□ 2.37
SPSB3-211ENST00000569380 NEUROD1Q13562 356 aa29.84■■■□□ 2.37
SPSB3-211ENST00000569380 PLPPR3Q6T4P5 718 aa29.84■■■□□ 2.37
SPSB3-211ENST00000569380 LMTK2Q8IWU2 1503 aa29.82■■■□□ 2.36
SPSB3-211ENST00000569380 EFCAB6Q5THR3 1501 aa29.81■■■□□ 2.36
SPSB3-211ENST00000569380 CAMSAP1Q5T5Y3 1602 aa29.8■■■□□ 2.36
SPSB3-211ENST00000569380 CLTCQ00610 1675 aaKnown RBP29.78■■■□□ 2.36
SPSB3-211ENST00000569380 PLA2R1Q13018 1463 aa29.78■■■□□ 2.36
SPSB3-211ENST00000569380 CFAP65Q6ZU64 1925 aaKnown RBP29.77■■■□□ 2.36
SPSB3-211ENST00000569380 ZC3H13Q5T200 1668 aaKnown RBP29.77■■■□□ 2.36
SPSB3-211ENST00000569380 NPATQ14207 1427 aa29.74■■■□□ 2.35
SPSB3-211ENST00000569380 LMTK3Q96Q04 1460 aa29.72■■■□□ 2.35
SPSB3-211ENST00000569380 CEBPAP49715 358 aaPredicted RBP29.7■■■□□ 2.35
SPSB3-211ENST00000569380 SPHKAPQ2M3C7 1700 aa29.7■■■□□ 2.35
SPSB3-211ENST00000569380 PPP6R1Q9UPN7 881 aa29.66■■■□□ 2.34
SPSB3-211ENST00000569380 PTPRTO14522 1441 aa29.65■■■□□ 2.34
SPSB3-211ENST00000569380 ZEB1P37275 1124 aaPredicted RBP29.65■■■□□ 2.34
SPSB3-211ENST00000569380 UGGT1Q9NYU2 1555 aa29.65■■■□□ 2.34
SPSB3-211ENST00000569380 RPRD2Q5VT52 1461 aaKnown RBP29.64■■■□□ 2.34
SPSB3-211ENST00000569380 FBXO31Q5XUX0 539 aaPredicted RBP29.63■■■□□ 2.33
SPSB3-211ENST00000569380 ARHGAP31Q2M1Z3 1444 aa29.63■■■□□ 2.33
SPSB3-211ENST00000569380 TRPM2O94759 1503 aa29.63■■■□□ 2.33
SPSB3-211ENST00000569380 ESF1Q9H501 851 aaKnown RBP29.62■■■□□ 2.33
SPSB3-211ENST00000569380 CLTCL1P53675 1640 aa29.61■■■□□ 2.33
SPSB3-211ENST00000569380 CCDC144AA2RUR9 1427 aa29.6■■■□□ 2.33
SPSB3-211ENST00000569380 C3P01024 1663 aa29.59■■■□□ 2.33
SPSB3-211ENST00000569380 PREX1Q8TCU6 1659 aa29.59■■■□□ 2.33
SPSB3-211ENST00000569380 ZMYM3Q14202 1370 aa29.59■■■□□ 2.33
SPSB3-211ENST00000569380 SYNMO15061 1565 aa29.57■■■□□ 2.32
SPSB3-211ENST00000569380 HSPA2P54652 639 aa29.57■■■□□ 2.32
SPSB3-211ENST00000569380 NOS1P29475 1434 aa29.56■■■□□ 2.32
SPSB3-211ENST00000569380 CNTLNQ9NXG0 1405 aa29.56■■■□□ 2.32
SPSB3-211ENST00000569380 TONSLQ96HA7 1378 aa29.55■■■□□ 2.32
SPSB3-211ENST00000569380 ERVK-7P63135 1459 aa29.54■■■□□ 2.32
SPSB3-211ENST00000569380 MROH2AA6NES4 1674 aa29.53■■■□□ 2.32
SPSB3-211ENST00000569380 L3MBTL2Q969R5 705 aa29.51■■■□□ 2.31
SPSB3-211ENST00000569380 SPATA31D1Q6ZQQ2 1576 aa29.48■■■□□ 2.31
SPSB3-211ENST00000569380 RGL3Q3MIN7 710 aa29.47■■■□□ 2.31
SPSB3-211ENST00000569380 PIK3C2BO00750 1634 aa29.46■■■□□ 2.31
SPSB3-211ENST00000569380 UHRF1BP1Q6BDS2 1440 aa29.44■■■□□ 2.3
SPSB3-211ENST00000569380 SPATA31E1Q6ZUB1 1445 aa29.44■■■□□ 2.3
SPSB3-211ENST00000569380 IDI1Q13907 227 aa29.43■■■□□ 2.3
SPSB3-211ENST00000569380 KIF1BO60333 1816 aa29.42■■■□□ 2.3
SPSB3-211ENST00000569380 CHGAP10645 457 aaKnown RBP29.41■■■□□ 2.3
SPSB3-211ENST00000569380 TIMELESSQ9UNS1 1208 aa29.41■■■□□ 2.3
SPSB3-211ENST00000569380 PPP1R15AO75807 674 aaPredicted RBP29.4■■■□□ 2.3
SPSB3-211ENST00000569380 MYO5BQ9ULV0 1848 aa29.37■■■□□ 2.29
SPSB3-211ENST00000569380 ADGRB3O60242 1522 aa29.36■■■□□ 2.29
SPSB3-211ENST00000569380 TNRQ92752 1358 aa29.36■■■□□ 2.29
SPSB3-211ENST00000569380 KDM2AQ9Y2K7 1162 aa29.36■■■□□ 2.29
SPSB3-211ENST00000569380 DCAF11Q8TEB1 546 aa29.35■■■□□ 2.29
SPSB3-211ENST00000569380 SLC52A1Q9NWF4 448 aa29.34■■■□□ 2.29
SPSB3-211ENST00000569380 SETD1BQ9UPS6 1966 aaKnown RBP29.33■■■□□ 2.29
SPSB3-211ENST00000569380 NBPF8Q3BBV2 869 aa29.32■■■□□ 2.28
SPSB3-211ENST00000569380 TMEM131LA2VDJ0 1609 aa29.31■■■□□ 2.28
SPSB3-211ENST00000569380 ZNF326Q5BKZ1 582 aaKnown RBP29.3■■■□□ 2.28
SPSB3-211ENST00000569380 MYO3AQ8NEV4 1616 aa29.28■■■□□ 2.28
SPSB3-211ENST00000569380 NEURL4Q96JN8 1562 aa29.27■■■□□ 2.28
SPSB3-211ENST00000569380 STRCQ7RTU9 1775 aa29.25■■■□□ 2.27
SPSB3-211ENST00000569380 IFT172Q9UG01 1749 aa29.25■■■□□ 2.27
SPSB3-211ENST00000569380 NUTM2DQ5VT03 806 aaPredicted RBP29.23■■■□□ 2.27
SPSB3-211ENST00000569380 STAG3Q9UJ98 1225 aa29.22■■■□□ 2.27
SPSB3-211ENST00000569380 PPLO60437 1756 aa29.21■■■□□ 2.27
SPSB3-211ENST00000569380 A2ML1A8K2U0 1454 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms