RNA–Protein interactions for RNA: ENST00000569380.5

SPSB3-211, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-211ENST00000569380 KIF3BO15066 747 aa30.16■■■□□ 2.42
SPSB3-211ENST00000569380 ADAMTSL3P82987 1691 aa30.15■■■□□ 2.42
SPSB3-211ENST00000569380 PZPP20742 1482 aa30.15■■■□□ 2.42
SPSB3-211ENST00000569380 BCORL1Q5H9F3 1711 aa30.15■■■□□ 2.42
SPSB3-211ENST00000569380 ATP10AO60312 1499 aa30.15■■■□□ 2.42
SPSB3-211ENST00000569380 NUP155O75694 1391 aa30.14■■■□□ 2.42
SPSB3-211ENST00000569380 EIF2AK4Q9P2K8 1649 aaKnown RBP30.14■■■□□ 2.41
SPSB3-211ENST00000569380 MPHOSPH9Q99550 1183 aa30.1■■■□□ 2.41
SPSB3-211ENST00000569380 MROH1Q8NDA8 1641 aa30.1■■■□□ 2.41
SPSB3-211ENST00000569380 DEPDC5O75140 1603 aa30.1■■■□□ 2.41
SPSB3-211ENST00000569380 MADDQ8WXG6 1647 aa30.08■■■□□ 2.41
SPSB3-211ENST00000569380 FOXD1Q16676 465 aa30.08■■■□□ 2.41
SPSB3-211ENST00000569380 KDM5DQ9BY66 1539 aa30.08■■■□□ 2.41
SPSB3-211ENST00000569380 SLC4A1APQ9BWU0 796 aaKnown RBP30.06■■■□□ 2.4
SPSB3-211ENST00000569380 FAM135AQ9P2D6 1515 aa30.05■■■□□ 2.4
SPSB3-211ENST00000569380 PTPRMP28827 1452 aa30.05■■■□□ 2.4
SPSB3-211ENST00000569380 RNF17Q9BXT8 1623 aaKnown RBP30.05■■■□□ 2.4
SPSB3-211ENST00000569380 IQGAP3Q86VI3 1631 aa30.03■■■□□ 2.4
SPSB3-211ENST00000569380 REREQ9P2R6 1566 aa30.03■■■□□ 2.4
SPSB3-211ENST00000569380 GGT6Q6P531 493 aa30.03■■■□□ 2.4
SPSB3-211ENST00000569380 PRDM15P57071 1507 aaPredicted RBP30.02■■■□□ 2.4
SPSB3-211ENST00000569380 MLECQ14165 292 aa29.98■■■□□ 2.39
SPSB3-211ENST00000569380 VWDEQ8N2E2 1590 aa29.98■■■□□ 2.39
SPSB3-211ENST00000569380 PKD2Q13563 968 aa29.98■■■□□ 2.39
SPSB3-211ENST00000569380 CEP152O94986 1710 aa29.97■■■□□ 2.39
SPSB3-211ENST00000569380 ACIN1Q9UKV3 1341 aaKnown RBP29.96■■■□□ 2.39
SPSB3-211ENST00000569380 RIMS1Q86UR5 1692 aaKnown RBP29.96■■■□□ 2.39
SPSB3-211ENST00000569380 AGLP35573 1532 aa29.96■■■□□ 2.39
SPSB3-211ENST00000569380 SIN3AQ96ST3 1273 aa29.92■■■□□ 2.38
SPSB3-211ENST00000569380 KANK1Q14678 1352 aa29.91■■■□□ 2.38
SPSB3-211ENST00000569380 E9PCH4 1651 aa29.88■■■□□ 2.37
SPSB3-211ENST00000569380 ABCC3O15438 1527 aa29.87■■■□□ 2.37
SPSB3-211ENST00000569380 TET3O43151 1660 aa29.87■■■□□ 2.37
SPSB3-211ENST00000569380 FER1L4A9Z1Z3 1794 aa29.86■■■□□ 2.37
SPSB3-211ENST00000569380 CLSPNQ9HAW4 1339 aa29.85■■■□□ 2.37
SPSB3-211ENST00000569380 WASHC2CQ9Y4E1 1318 aa29.85■■■□□ 2.37
SPSB3-211ENST00000569380 ANKRD30BQ9BXX2 1392 aa29.84■■■□□ 2.37
SPSB3-211ENST00000569380 NEUROD1Q13562 356 aa29.84■■■□□ 2.37
SPSB3-211ENST00000569380 PLPPR3Q6T4P5 718 aa29.84■■■□□ 2.37
SPSB3-211ENST00000569380 LMTK2Q8IWU2 1503 aa29.82■■■□□ 2.36
SPSB3-211ENST00000569380 EFCAB6Q5THR3 1501 aa29.81■■■□□ 2.36
SPSB3-211ENST00000569380 CAMSAP1Q5T5Y3 1602 aa29.8■■■□□ 2.36
SPSB3-211ENST00000569380 CLTCQ00610 1675 aaKnown RBP29.78■■■□□ 2.36
SPSB3-211ENST00000569380 PLA2R1Q13018 1463 aa29.78■■■□□ 2.36
SPSB3-211ENST00000569380 CFAP65Q6ZU64 1925 aaKnown RBP29.77■■■□□ 2.36
SPSB3-211ENST00000569380 ZC3H13Q5T200 1668 aaKnown RBP29.77■■■□□ 2.36
SPSB3-211ENST00000569380 NPATQ14207 1427 aa29.74■■■□□ 2.35
SPSB3-211ENST00000569380 LMTK3Q96Q04 1460 aa29.72■■■□□ 2.35
SPSB3-211ENST00000569380 CEBPAP49715 358 aaPredicted RBP29.7■■■□□ 2.35
SPSB3-211ENST00000569380 SPHKAPQ2M3C7 1700 aa29.7■■■□□ 2.35
SPSB3-211ENST00000569380 PPP6R1Q9UPN7 881 aa29.66■■■□□ 2.34
SPSB3-211ENST00000569380 PTPRTO14522 1441 aa29.65■■■□□ 2.34
SPSB3-211ENST00000569380 ZEB1P37275 1124 aaPredicted RBP29.65■■■□□ 2.34
SPSB3-211ENST00000569380 UGGT1Q9NYU2 1555 aa29.65■■■□□ 2.34
SPSB3-211ENST00000569380 RPRD2Q5VT52 1461 aaKnown RBP29.64■■■□□ 2.34
SPSB3-211ENST00000569380 FBXO31Q5XUX0 539 aaPredicted RBP29.63■■■□□ 2.33
SPSB3-211ENST00000569380 ARHGAP31Q2M1Z3 1444 aa29.63■■■□□ 2.33
SPSB3-211ENST00000569380 TRPM2O94759 1503 aa29.63■■■□□ 2.33
SPSB3-211ENST00000569380 ESF1Q9H501 851 aaKnown RBP29.62■■■□□ 2.33
SPSB3-211ENST00000569380 CLTCL1P53675 1640 aa29.61■■■□□ 2.33
SPSB3-211ENST00000569380 CCDC144AA2RUR9 1427 aa29.6■■■□□ 2.33
SPSB3-211ENST00000569380 C3P01024 1663 aa29.59■■■□□ 2.33
SPSB3-211ENST00000569380 PREX1Q8TCU6 1659 aa29.59■■■□□ 2.33
SPSB3-211ENST00000569380 ZMYM3Q14202 1370 aa29.59■■■□□ 2.33
SPSB3-211ENST00000569380 SYNMO15061 1565 aa29.57■■■□□ 2.32
SPSB3-211ENST00000569380 HSPA2P54652 639 aa29.57■■■□□ 2.32
SPSB3-211ENST00000569380 NOS1P29475 1434 aa29.56■■■□□ 2.32
SPSB3-211ENST00000569380 CNTLNQ9NXG0 1405 aa29.56■■■□□ 2.32
SPSB3-211ENST00000569380 TONSLQ96HA7 1378 aa29.55■■■□□ 2.32
SPSB3-211ENST00000569380 ERVK-7P63135 1459 aa29.54■■■□□ 2.32
SPSB3-211ENST00000569380 MROH2AA6NES4 1674 aa29.53■■■□□ 2.32
SPSB3-211ENST00000569380 L3MBTL2Q969R5 705 aa29.51■■■□□ 2.31
SPSB3-211ENST00000569380 SPATA31D1Q6ZQQ2 1576 aa29.48■■■□□ 2.31
SPSB3-211ENST00000569380 RGL3Q3MIN7 710 aa29.47■■■□□ 2.31
SPSB3-211ENST00000569380 PIK3C2BO00750 1634 aa29.46■■■□□ 2.31
SPSB3-211ENST00000569380 UHRF1BP1Q6BDS2 1440 aa29.44■■■□□ 2.3
SPSB3-211ENST00000569380 SPATA31E1Q6ZUB1 1445 aa29.44■■■□□ 2.3
SPSB3-211ENST00000569380 IDI1Q13907 227 aa29.43■■■□□ 2.3
SPSB3-211ENST00000569380 KIF1BO60333 1816 aa29.42■■■□□ 2.3
SPSB3-211ENST00000569380 CHGAP10645 457 aaKnown RBP29.41■■■□□ 2.3
SPSB3-211ENST00000569380 TIMELESSQ9UNS1 1208 aa29.41■■■□□ 2.3
SPSB3-211ENST00000569380 PPP1R15AO75807 674 aaPredicted RBP29.4■■■□□ 2.3
SPSB3-211ENST00000569380 MYO5BQ9ULV0 1848 aa29.37■■■□□ 2.29
SPSB3-211ENST00000569380 ADGRB3O60242 1522 aa29.36■■■□□ 2.29
SPSB3-211ENST00000569380 TNRQ92752 1358 aa29.36■■■□□ 2.29
SPSB3-211ENST00000569380 KDM2AQ9Y2K7 1162 aa29.36■■■□□ 2.29
SPSB3-211ENST00000569380 DCAF11Q8TEB1 546 aa29.35■■■□□ 2.29
SPSB3-211ENST00000569380 SLC52A1Q9NWF4 448 aa29.34■■■□□ 2.29
SPSB3-211ENST00000569380 SETD1BQ9UPS6 1966 aaKnown RBP29.33■■■□□ 2.29
SPSB3-211ENST00000569380 NBPF8Q3BBV2 869 aa29.32■■■□□ 2.28
SPSB3-211ENST00000569380 TMEM131LA2VDJ0 1609 aa29.31■■■□□ 2.28
SPSB3-211ENST00000569380 ZNF326Q5BKZ1 582 aaKnown RBP29.3■■■□□ 2.28
SPSB3-211ENST00000569380 MYO3AQ8NEV4 1616 aa29.28■■■□□ 2.28
SPSB3-211ENST00000569380 NEURL4Q96JN8 1562 aa29.27■■■□□ 2.28
SPSB3-211ENST00000569380 STRCQ7RTU9 1775 aa29.25■■■□□ 2.27
SPSB3-211ENST00000569380 IFT172Q9UG01 1749 aa29.25■■■□□ 2.27
SPSB3-211ENST00000569380 NUTM2DQ5VT03 806 aaPredicted RBP29.23■■■□□ 2.27
SPSB3-211ENST00000569380 STAG3Q9UJ98 1225 aa29.22■■■□□ 2.27
SPSB3-211ENST00000569380 PPLO60437 1756 aa29.21■■■□□ 2.27
SPSB3-211ENST00000569380 A2ML1A8K2U0 1454 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms