RNA–Protein interactions for RNA: ENST00000568814.1

HERPUD1-216, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 509 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-216ENST00000568814 ILDR2Q71H61 639 aa15.26■□□□□ 0.03
HERPUD1-216ENST00000568814 PCGF6Q9BYE7 350 aa15.26■□□□□ 0.03
HERPUD1-216ENST00000568814 SIGLEC1Q9BZZ2 1709 aa15.25■□□□□ 0.03
HERPUD1-216ENST00000568814 DEPDC5O75140 1603 aa15.25■□□□□ 0.03
HERPUD1-216ENST00000568814 UNC13BO14795 1591 aa15.24■□□□□ 0.03
HERPUD1-216ENST00000568814 ARID4BQ4LE39 1312 aaPredicted RBP15.24■□□□□ 0.03
HERPUD1-216ENST00000568814 FAM135AQ9P2D6 1515 aa15.24■□□□□ 0.03
HERPUD1-216ENST00000568814 KIF3BO15066 747 aa15.24■□□□□ 0.03
HERPUD1-216ENST00000568814 HRCP23327 699 aa15.24■□□□□ 0.03
HERPUD1-216ENST00000568814 RAB3GAP2Q9H2M9 1393 aa15.24■□□□□ 0.03
HERPUD1-216ENST00000568814 PRDM15P57071 1507 aaPredicted RBP15.23■□□□□ 0.03
HERPUD1-216ENST00000568814 PPP6R1Q9UPN7 881 aa15.22■□□□□ 0.03
HERPUD1-216ENST00000568814 KANK1Q14678 1352 aa15.21■□□□□ 0.02
HERPUD1-216ENST00000568814 MROH1Q8NDA8 1641 aa15.21■□□□□ 0.02
HERPUD1-216ENST00000568814 SOCS7O14512 581 aa15.2■□□□□ 0.02
HERPUD1-216ENST00000568814 KDM5DQ9BY66 1539 aa15.19■□□□□ 0.02
HERPUD1-216ENST00000568814 ZC3H13Q5T200 1668 aaKnown RBP15.19■□□□□ 0.02
HERPUD1-216ENST00000568814 GGT6Q6P531 493 aa15.18■□□□□ 0.02
HERPUD1-216ENST00000568814 DISP3Q9P2K9 1392 aa15.18■□□□□ 0.02
HERPUD1-216ENST00000568814 VWDEQ8N2E2 1590 aa15.18■□□□□ 0.02
HERPUD1-216ENST00000568814 IQGAP3Q86VI3 1631 aa15.17■□□□□ 0.02
HERPUD1-216ENST00000568814 NUP155O75694 1391 aa15.16■□□□□ 0.02
HERPUD1-216ENST00000568814 LMTK2Q8IWU2 1503 aa15.16■□□□□ 0.02
HERPUD1-216ENST00000568814 CNTLNQ9NXG0 1405 aa15.16■□□□□ 0.02
HERPUD1-216ENST00000568814 MLECQ14165 292 aa15.15■□□□□ 0.02
HERPUD1-216ENST00000568814 TRIM52Q96A61 297 aa15.15■□□□□ 0.02
HERPUD1-216ENST00000568814 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.15■□□□□ 0.02
HERPUD1-216ENST00000568814 ESF1Q9H501 851 aaKnown RBP15.15■□□□□ 0.02
HERPUD1-216ENST00000568814 ABCC3O15438 1527 aa15.14■□□□□ 0.01
HERPUD1-216ENST00000568814 WASHC2CQ9Y4E1 1318 aa15.14■□□□□ 0.01
HERPUD1-216ENST00000568814 FER1L4A9Z1Z3 1794 aa15.13■□□□□ 0.01
HERPUD1-216ENST00000568814 ADAMTSL3P82987 1691 aa15.13■□□□□ 0.01
HERPUD1-216ENST00000568814 MROH2AA6NES4 1674 aa15.12■□□□□ 0.01
HERPUD1-216ENST00000568814 TET3O43151 1660 aa15.12■□□□□ 0.01
HERPUD1-216ENST00000568814 CEP152O94986 1710 aa15.12■□□□□ 0.01
HERPUD1-216ENST00000568814 PZPP20742 1482 aa15.12■□□□□ 0.01
HERPUD1-216ENST00000568814 CLTCQ00610 1675 aaKnown RBP15.11■□□□□ 0.01
HERPUD1-216ENST00000568814 EFCAB6Q5THR3 1501 aa15.11■□□□□ 0.01
HERPUD1-216ENST00000568814 CAMSAP1Q5T5Y3 1602 aa15.1■□□□□ 0.01
HERPUD1-216ENST00000568814 MADDQ8WXG6 1647 aa15.1■□□□□ 0.01
HERPUD1-216ENST00000568814 ARHGAP31Q2M1Z3 1444 aa15.09■□□□□ 0.01
HERPUD1-216ENST00000568814 SLC4A1APQ9BWU0 796 aaKnown RBP15.09■□□□□ 0.01
HERPUD1-216ENST00000568814 RPRD2Q5VT52 1461 aaKnown RBP15.08■□□□□ 0.01
HERPUD1-216ENST00000568814 PTPRMP28827 1452 aa15.08■□□□□ 0
HERPUD1-216ENST00000568814 RIMS1Q86UR5 1692 aaKnown RBP15.07■□□□□ 0
HERPUD1-216ENST00000568814 MPHOSPH9Q99550 1183 aa15.06■□□□□ 0
HERPUD1-216ENST00000568814 SPATA31D1Q6ZQQ2 1576 aa15.06■□□□□ 0
HERPUD1-216ENST00000568814 ZMYM3Q14202 1370 aa15.05■□□□□ -0
HERPUD1-216ENST00000568814 E9PCH4 1651 aa15.05■□□□□ -0
HERPUD1-216ENST00000568814 NPATQ14207 1427 aa15.04■□□□□ -0
HERPUD1-216ENST00000568814 PKD2Q13563 968 aa15.03■□□□□ -0
HERPUD1-216ENST00000568814 C3P01024 1663 aa15.03■□□□□ -0
HERPUD1-216ENST00000568814 DHX57Q6P158 1386 aaKnown RBP15.02■□□□□ -0
HERPUD1-216ENST00000568814 PREX1Q8TCU6 1659 aa15□□□□□ -0.01
HERPUD1-216ENST00000568814 ERVK-7P63135 1459 aa15□□□□□ -0.01
HERPUD1-216ENST00000568814 SPHKAPQ2M3C7 1700 aa14.99□□□□□ -0.01
HERPUD1-216ENST00000568814 PTPRTO14522 1441 aa14.99□□□□□ -0.01
HERPUD1-216ENST00000568814 NOS1P29475 1434 aa14.99□□□□□ -0.01
HERPUD1-216ENST00000568814 CERKQ8TCT0 537 aa14.98□□□□□ -0.01
HERPUD1-216ENST00000568814 TRPM2O94759 1503 aa14.97□□□□□ -0.01
HERPUD1-216ENST00000568814 HSPA2P54652 639 aa14.97□□□□□ -0.01
HERPUD1-216ENST00000568814 TNRQ92752 1358 aa14.96□□□□□ -0.02
HERPUD1-216ENST00000568814 CLSPNQ9HAW4 1339 aa14.95□□□□□ -0.02
HERPUD1-216ENST00000568814 ANKRD30BQ9BXX2 1392 aa14.95□□□□□ -0.02
HERPUD1-216ENST00000568814 SYNMO15061 1565 aa14.94□□□□□ -0.02
HERPUD1-216ENST00000568814 CFAP65Q6ZU64 1925 aaKnown RBP14.94□□□□□ -0.02
HERPUD1-216ENST00000568814 CEBPAP49715 358 aaPredicted RBP14.94□□□□□ -0.02
HERPUD1-216ENST00000568814 FOXD1Q16676 465 aa14.94□□□□□ -0.02
HERPUD1-216ENST00000568814 FBXO31Q5XUX0 539 aaPredicted RBP14.94□□□□□ -0.02
HERPUD1-216ENST00000568814 NLRP1Q9C000 1473 aa14.94□□□□□ -0.02
HERPUD1-216ENST00000568814 CCDC144AA2RUR9 1427 aa14.93□□□□□ -0.02
HERPUD1-216ENST00000568814 SLC52A1Q9NWF4 448 aa14.93□□□□□ -0.02
HERPUD1-216ENST00000568814 PLA2R1Q13018 1463 aa14.93□□□□□ -0.02
HERPUD1-216ENST00000568814 SETD1BQ9UPS6 1966 aaKnown RBP14.93□□□□□ -0.02
HERPUD1-216ENST00000568814 PIK3C2BO00750 1634 aa14.92□□□□□ -0.02
HERPUD1-216ENST00000568814 CCER1Q8TC90 406 aaPredicted RBP14.92□□□□□ -0.02
HERPUD1-216ENST00000568814 PLPPR3Q6T4P5 718 aa14.91□□□□□ -0.02
HERPUD1-216ENST00000568814 CLTCL1P53675 1640 aa14.9□□□□□ -0.02
HERPUD1-216ENST00000568814 MYO3AQ8NEV4 1616 aa14.9□□□□□ -0.02
HERPUD1-216ENST00000568814 KDM5AP29375 1690 aaKnown RBP14.88□□□□□ -0.03
HERPUD1-216ENST00000568814 ZNF142P52746 1687 aaPredicted RBP14.88□□□□□ -0.03
HERPUD1-216ENST00000568814 UGGT1Q9NYU2 1555 aa14.88□□□□□ -0.03
HERPUD1-216ENST00000568814 A2ML1A8K2U0 1454 aa14.88□□□□□ -0.03
HERPUD1-216ENST00000568814 NEURL4Q96JN8 1562 aa14.87□□□□□ -0.03
HERPUD1-216ENST00000568814 UHRF1BP1Q6BDS2 1440 aa14.87□□□□□ -0.03
HERPUD1-216ENST00000568814 KIF1BO60333 1816 aa14.87□□□□□ -0.03
HERPUD1-216ENST00000568814 ADGRB3O60242 1522 aa14.87□□□□□ -0.03
HERPUD1-216ENST00000568814 CEP170BQ9Y4F5 1589 aaPredicted RBP14.86□□□□□ -0.03
HERPUD1-216ENST00000568814 IDI1Q13907 227 aa14.85□□□□□ -0.03
HERPUD1-216ENST00000568814 STAG3Q9UJ98 1225 aa14.83□□□□□ -0.04
HERPUD1-216ENST00000568814 TMEM131LA2VDJ0 1609 aa14.83□□□□□ -0.04
HERPUD1-216ENST00000568814 UBR1Q8IWV7 1749 aa14.83□□□□□ -0.04
HERPUD1-216ENST00000568814 SPATA31E1Q6ZUB1 1445 aa14.82□□□□□ -0.04
HERPUD1-216ENST00000568814 CHGAP10645 457 aaKnown RBP14.8□□□□□ -0.04
HERPUD1-216ENST00000568814 SIN3AQ96ST3 1273 aa14.8□□□□□ -0.04
HERPUD1-216ENST00000568814 RPGRIP1LQ68CZ1 1315 aa14.79□□□□□ -0.04
HERPUD1-216ENST00000568814 THEMISQ8N1K5 641 aaPredicted RBP14.79□□□□□ -0.04
HERPUD1-216ENST00000568814 NEUROD1Q13562 356 aa14.78□□□□□ -0.04
HERPUD1-216ENST00000568814 MYO5BQ9ULV0 1848 aa14.78□□□□□ -0.04
HERPUD1-216ENST00000568814 SLIT1O75093 1534 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms