RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 PLPPR3Q6T4P5 718 aa15.22■□□□□ 0.03
PKM-221ENST00000568743 ESF1Q9H501 851 aaKnown RBP15.22■□□□□ 0.03
PKM-221ENST00000568743 RNF17Q9BXT8 1623 aaKnown RBP15.21■□□□□ 0.03
PKM-221ENST00000568743 MROH1Q8NDA8 1641 aa15.21■□□□□ 0.02
PKM-221ENST00000568743 RIMS1Q86UR5 1692 aaKnown RBP15.2■□□□□ 0.02
PKM-221ENST00000568743 FER1L4A9Z1Z3 1794 aa15.2■□□□□ 0.02
PKM-221ENST00000568743 WASHC2CQ9Y4E1 1318 aa15.19■□□□□ 0.02
PKM-221ENST00000568743 GCC2Q8IWJ2 1684 aa15.19■□□□□ 0.02
PKM-221ENST00000568743 TRIM26Q12899 539 aaPredicted RBP15.19■□□□□ 0.02
PKM-221ENST00000568743 PTPRMP28827 1452 aa15.18■□□□□ 0.02
PKM-221ENST00000568743 PRDM15P57071 1507 aaPredicted RBP15.17■□□□□ 0.02
PKM-221ENST00000568743 CEBPAP49715 358 aaPredicted RBP15.17■□□□□ 0.02
PKM-221ENST00000568743 PPP6R1Q9UPN7 881 aa15.17■□□□□ 0.02
PKM-221ENST00000568743 DEPDC5O75140 1603 aa15.17■□□□□ 0.02
PKM-221ENST00000568743 KDM5DQ9BY66 1539 aa15.17■□□□□ 0.02
PKM-221ENST00000568743 CNTLNQ9NXG0 1405 aa15.17■□□□□ 0.02
PKM-221ENST00000568743 CLTCQ00610 1675 aaKnown RBP15.16■□□□□ 0.02
PKM-221ENST00000568743 KANK1Q14678 1352 aa15.16■□□□□ 0.02
PKM-221ENST00000568743 ABCC3O15438 1527 aa15.16■□□□□ 0.02
PKM-221ENST00000568743 SETD5Q9C0A6 1442 aa15.16■□□□□ 0.02
PKM-221ENST00000568743 ZMYM3Q14202 1370 aa15.14■□□□□ 0.01
PKM-221ENST00000568743 UNC13BO14795 1591 aa15.14■□□□□ 0.01
PKM-221ENST00000568743 NUP155O75694 1391 aa15.13■□□□□ 0.01
PKM-221ENST00000568743 CEP152O94986 1710 aa15.13■□□□□ 0.01
PKM-221ENST00000568743 TRIM52Q96A61 297 aa15.13■□□□□ 0.01
PKM-221ENST00000568743 RAB3GAP2Q9H2M9 1393 aa15.12■□□□□ 0.01
PKM-221ENST00000568743 VWDEQ8N2E2 1590 aa15.12■□□□□ 0.01
PKM-221ENST00000568743 FAM135AQ9P2D6 1515 aa15.12■□□□□ 0.01
PKM-221ENST00000568743 C3P01024 1663 aa15.1■□□□□ 0.01
PKM-221ENST00000568743 ZC3H13Q5T200 1668 aaKnown RBP15.1■□□□□ 0.01
PKM-221ENST00000568743 MROH2AA6NES4 1674 aa15.09■□□□□ 0.01
PKM-221ENST00000568743 LMTK2Q8IWU2 1503 aa15.09■□□□□ 0.01
PKM-221ENST00000568743 FBXO31Q5XUX0 539 aaPredicted RBP15.09■□□□□ 0.01
PKM-221ENST00000568743 CAMSAP1Q5T5Y3 1602 aa15.09■□□□□ 0.01
PKM-221ENST00000568743 PZPP20742 1482 aa15.08■□□□□ 0
PKM-221ENST00000568743 IQGAP3Q86VI3 1631 aa15.07■□□□□ 0
PKM-221ENST00000568743 EFCAB6Q5THR3 1501 aa15.07■□□□□ 0
PKM-221ENST00000568743 NPATQ14207 1427 aa15.06■□□□□ 0
PKM-221ENST00000568743 PCGF6Q9BYE7 350 aa15.05■□□□□ -0
PKM-221ENST00000568743 TET3O43151 1660 aa15.04■□□□□ -0
PKM-221ENST00000568743 ARHGAP31Q2M1Z3 1444 aa15.04■□□□□ -0
PKM-221ENST00000568743 SLC4A1APQ9BWU0 796 aaKnown RBP15.04■□□□□ -0
PKM-221ENST00000568743 ERVK-7P63135 1459 aa15.03■□□□□ -0
PKM-221ENST00000568743 TNRQ92752 1358 aa15.02■□□□□ -0
PKM-221ENST00000568743 PKD2Q13563 968 aa15.02■□□□□ -0
PKM-221ENST00000568743 MPHOSPH9Q99550 1183 aa15.01□□□□□ -0.01
PKM-221ENST00000568743 E9PCH4 1651 aa15□□□□□ -0.01
PKM-221ENST00000568743 SPATA31D1Q6ZQQ2 1576 aa15□□□□□ -0.01
PKM-221ENST00000568743 HRCP23327 699 aa15□□□□□ -0.01
PKM-221ENST00000568743 FOXD1Q16676 465 aa15□□□□□ -0.01
PKM-221ENST00000568743 PREX1Q8TCU6 1659 aa15□□□□□ -0.01
PKM-221ENST00000568743 RPRD2Q5VT52 1461 aaKnown RBP14.99□□□□□ -0.01
PKM-221ENST00000568743 CFAP65Q6ZU64 1925 aaKnown RBP14.98□□□□□ -0.01
PKM-221ENST00000568743 NOS1P29475 1434 aa14.98□□□□□ -0.01
PKM-221ENST00000568743 UHRF1BP1Q6BDS2 1440 aa14.98□□□□□ -0.01
PKM-221ENST00000568743 SYNMO15061 1565 aa14.97□□□□□ -0.01
PKM-221ENST00000568743 ACIN1Q9UKV3 1341 aaKnown RBP14.96□□□□□ -0.01
PKM-221ENST00000568743 MYO3AQ8NEV4 1616 aa14.96□□□□□ -0.01
PKM-221ENST00000568743 LMTK3Q96Q04 1460 aa14.95□□□□□ -0.02
PKM-221ENST00000568743 UGGT1Q9NYU2 1555 aa14.94□□□□□ -0.02
PKM-221ENST00000568743 HSPA2P54652 639 aa14.94□□□□□ -0.02
PKM-221ENST00000568743 IDI1Q13907 227 aa14.93□□□□□ -0.02
PKM-221ENST00000568743 PLA2R1Q13018 1463 aa14.93□□□□□ -0.02
PKM-221ENST00000568743 NLRP1Q9C000 1473 aa14.93□□□□□ -0.02
PKM-221ENST00000568743 CEP170BQ9Y4F5 1589 aaPredicted RBP14.93□□□□□ -0.02
PKM-221ENST00000568743 PTPRTO14522 1441 aa14.92□□□□□ -0.02
PKM-221ENST00000568743 A2ML1A8K2U0 1454 aa14.92□□□□□ -0.02
PKM-221ENST00000568743 SETD1BQ9UPS6 1966 aaKnown RBP14.91□□□□□ -0.02
PKM-221ENST00000568743 SPHKAPQ2M3C7 1700 aa14.9□□□□□ -0.02
PKM-221ENST00000568743 CHGAP10645 457 aaKnown RBP14.9□□□□□ -0.02
PKM-221ENST00000568743 SLC52A1Q9NWF4 448 aa14.9□□□□□ -0.02
PKM-221ENST00000568743 TRPM2O94759 1503 aa14.9□□□□□ -0.02
PKM-221ENST00000568743 ZNF142P52746 1687 aaPredicted RBP14.9□□□□□ -0.02
PKM-221ENST00000568743 PIK3C2BO00750 1634 aa14.89□□□□□ -0.03
PKM-221ENST00000568743 STAG3Q9UJ98 1225 aa14.89□□□□□ -0.03
PKM-221ENST00000568743 CLTCL1P53675 1640 aa14.88□□□□□ -0.03
PKM-221ENST00000568743 DHX57Q6P158 1386 aaKnown RBP14.86□□□□□ -0.03
PKM-221ENST00000568743 ADGRB3O60242 1522 aa14.86□□□□□ -0.03
PKM-221ENST00000568743 ANKRD30BQ9BXX2 1392 aa14.85□□□□□ -0.03
PKM-221ENST00000568743 THEMISQ8N1K5 641 aaPredicted RBP14.85□□□□□ -0.03
PKM-221ENST00000568743 CCDC144AA2RUR9 1427 aa14.84□□□□□ -0.03
PKM-221ENST00000568743 UBR1Q8IWV7 1749 aa14.84□□□□□ -0.03
PKM-221ENST00000568743 TMEM131LA2VDJ0 1609 aa14.82□□□□□ -0.04
PKM-221ENST00000568743 NCKAP5LQ9HCH0 1330 aa14.82□□□□□ -0.04
PKM-221ENST00000568743 ZNF326Q5BKZ1 582 aaKnown RBP14.81□□□□□ -0.04
PKM-221ENST00000568743 TMEM2Q9UHN6 1383 aa14.81□□□□□ -0.04
PKM-221ENST00000568743 LTKP29376 864 aa14.79□□□□□ -0.04
PKM-221ENST00000568743 RGL3Q3MIN7 710 aa14.79□□□□□ -0.04
PKM-221ENST00000568743 NUTM2DQ5VT03 806 aaPredicted RBP14.79□□□□□ -0.04
PKM-221ENST00000568743 SENP3Q9H4L4 574 aaPredicted RBP14.79□□□□□ -0.04
PKM-221ENST00000568743 ARHGAP23Q9P227 1491 aa14.79□□□□□ -0.04
PKM-221ENST00000568743 MYO5BQ9ULV0 1848 aa14.79□□□□□ -0.04
PKM-221ENST00000568743 KDM5AP29375 1690 aaKnown RBP14.78□□□□□ -0.04
PKM-221ENST00000568743 SLIT1O75093 1534 aa14.78□□□□□ -0.04
PKM-221ENST00000568743 RIMS2Q9UQ26 1411 aa14.78□□□□□ -0.04
PKM-221ENST00000568743 TXNDC2Q86VQ3 553 aa14.78□□□□□ -0.04
PKM-221ENST00000568743 ANKLE2Q86XL3 938 aa14.78□□□□□ -0.04
PKM-221ENST00000568743 SIN3AQ96ST3 1273 aa14.77□□□□□ -0.05
PKM-221ENST00000568743 ZFYVE9O95405 1425 aa14.76□□□□□ -0.05
PKM-221ENST00000568743 SPATA31E1Q6ZUB1 1445 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms