RNA–Protein interactions for RNA: ENST00000568359.1

SNX29-206, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-206ENST00000568359 HNRNPMP52272 730 aaKnown RBP eCLIP8.69□□□□□ -1.02
SNX29-206ENST00000568359 PLCB2Q00722 1185 aa8.69□□□□□ -1.02
SNX29-206ENST00000568359 PKD2Q13563 968 aa8.69□□□□□ -1.02
SNX29-206ENST00000568359 GGT6Q6P531 493 aa8.69□□□□□ -1.02
SNX29-206ENST00000568359 CFDP1Q9UEE9 299 aaPredicted RBP8.69□□□□□ -1.02
SNX29-206ENST00000568359 MTUS2Q5JR59 1369 aa8.69□□□□□ -1.02
SNX29-206ENST00000568359 BCANQ96GW7 911 aa8.68□□□□□ -1.02
SNX29-206ENST00000568359 DNMT1P26358 1616 aaKnown RBP8.67□□□□□ -1.02
SNX29-206ENST00000568359 TCOF1Q13428 1488 aaKnown RBP8.67□□□□□ -1.02
SNX29-206ENST00000568359 PTPRKQ15262 1439 aa8.67□□□□□ -1.02
SNX29-206ENST00000568359 KIAA1107Q9UPP5 1409 aa8.67□□□□□ -1.02
SNX29-206ENST00000568359 TIAM1Q13009 1591 aa8.66□□□□□ -1.02
SNX29-206ENST00000568359 EHBP1L1Q8N3D4 1523 aa8.66□□□□□ -1.02
SNX29-206ENST00000568359 A2ML1A8K2U0 1454 aa8.66□□□□□ -1.02
SNX29-206ENST00000568359 PIP4K2BP78356 416 aa8.65□□□□□ -1.02
SNX29-206ENST00000568359 MED1Q15648 1581 aaPredicted RBP8.65□□□□□ -1.03
SNX29-206ENST00000568359 CPS1P31327 1500 aa8.64□□□□□ -1.03
SNX29-206ENST00000568359 KDM5DQ9BY66 1539 aa8.64□□□□□ -1.03
SNX29-206ENST00000568359 TIMELESSQ9UNS1 1208 aa8.64□□□□□ -1.03
SNX29-206ENST00000568359 FAM135AQ9P2D6 1515 aa8.63□□□□□ -1.03
SNX29-206ENST00000568359 TNRQ92752 1358 aa8.62□□□□□ -1.03
SNX29-206ENST00000568359 NEURL4Q96JN8 1562 aa8.62□□□□□ -1.03
SNX29-206ENST00000568359 TOM1O60784 492 aa8.62□□□□□ -1.03
SNX29-206ENST00000568359 CCDC141Q6ZP82 1450 aa8.62□□□□□ -1.03
SNX29-206ENST00000568359 IQGAP1P46940 1657 aa8.62□□□□□ -1.03
SNX29-206ENST00000568359 FKBP8Q14318 412 aa8.61□□□□□ -1.03
SNX29-206ENST00000568359 ARXQ96QS3 562 aa8.61□□□□□ -1.03
SNX29-206ENST00000568359 PZPP20742 1482 aa8.61□□□□□ -1.03
SNX29-206ENST00000568359 SHANK2Q9UPX8 1470 aa8.61□□□□□ -1.03
SNX29-206ENST00000568359 RTEL1-TNFRSF6BF6WH68 1400 aa8.61□□□□□ -1.03
SNX29-206ENST00000568359 UGGT1Q9NYU2 1555 aa8.61□□□□□ -1.03
SNX29-206ENST00000568359 ZC3H13Q5T200 1668 aaKnown RBP8.6□□□□□ -1.03
SNX29-206ENST00000568359 CAMSAP2Q08AD1 1489 aa8.6□□□□□ -1.03
SNX29-206ENST00000568359 KIF3BO15066 747 aa8.6□□□□□ -1.03
SNX29-206ENST00000568359 HSPA1LP34931 641 aa8.6□□□□□ -1.03
SNX29-206ENST00000568359 DEPDC5O75140 1603 aa8.6□□□□□ -1.03
SNX29-206ENST00000568359 SYNMO15061 1565 aa8.6□□□□□ -1.03
SNX29-206ENST00000568359 DHX29Q7Z478 1369 aaKnown RBP8.6□□□□□ -1.03
SNX29-206ENST00000568359 ZNF644Q9H582 1327 aaPredicted RBP8.59□□□□□ -1.03
SNX29-206ENST00000568359 WASHC2CQ9Y4E1 1318 aa8.59□□□□□ -1.03
SNX29-206ENST00000568359 NLRP1Q9C000 1473 aa8.59□□□□□ -1.03
SNX29-206ENST00000568359 MBD5Q9P267 1494 aa8.59□□□□□ -1.03
SNX29-206ENST00000568359 RNF17Q9BXT8 1623 aaKnown RBP8.59□□□□□ -1.03
SNX29-206ENST00000568359 ANKLE2Q86XL3 938 aa8.59□□□□□ -1.03
SNX29-206ENST00000568359 CEP162Q5TB80 1403 aa8.59□□□□□ -1.03
SNX29-206ENST00000568359 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.59□□□□□ -1.03
SNX29-206ENST00000568359 VWDEQ8N2E2 1590 aa8.58□□□□□ -1.04
SNX29-206ENST00000568359 TPRNQ4KMQ1 711 aa8.58□□□□□ -1.04
SNX29-206ENST00000568359 NPHP4O75161 1426 aaPredicted RBP8.57□□□□□ -1.04
SNX29-206ENST00000568359 FBXO31Q5XUX0 539 aaPredicted RBP8.57□□□□□ -1.04
SNX29-206ENST00000568359 THEMISQ8N1K5 641 aaPredicted RBP8.57□□□□□ -1.04
SNX29-206ENST00000568359 FOXD4L1Q9NU39 408 aa8.57□□□□□ -1.04
SNX29-206ENST00000568359 ARHGEF5Q12774 1597 aa8.56□□□□□ -1.04
SNX29-206ENST00000568359 EIF2AK4Q9P2K8 1649 aaKnown RBP8.56□□□□□ -1.04
SNX29-206ENST00000568359 CEP152O94986 1710 aa8.56□□□□□ -1.04
SNX29-206ENST00000568359 NCOA2Q15596 1464 aa8.56□□□□□ -1.04
SNX29-206ENST00000568359 MIA2Q96PC5 1412 aa8.55□□□□□ -1.04
SNX29-206ENST00000568359 TSPY4P0CV99 314 aa8.55□□□□□ -1.04
SNX29-206ENST00000568359 TSPY10P0CW01 314 aa8.55□□□□□ -1.04
SNX29-206ENST00000568359 STRCP1A6NGW2 1772 aa8.54□□□□□ -1.04
SNX29-206ENST00000568359 MED14O60244 1454 aa8.54□□□□□ -1.04
SNX29-206ENST00000568359 HAP1P54257 671 aaPredicted RBP8.54□□□□□ -1.04
SNX29-206ENST00000568359 RSPH4AQ5TD94 716 aa8.54□□□□□ -1.04
SNX29-206ENST00000568359 CFAP65Q6ZU64 1925 aaKnown RBP8.54□□□□□ -1.04
SNX29-206ENST00000568359 UBR1Q8IWV7 1749 aa8.54□□□□□ -1.04
SNX29-206ENST00000568359 ABCC3O15438 1527 aa8.54□□□□□ -1.04
SNX29-206ENST00000568359 ERVK-7P63135 1459 aa8.52□□□□□ -1.05
SNX29-206ENST00000568359 ALKQ9UM73 1620 aa8.52□□□□□ -1.05
SNX29-206ENST00000568359 MAST1Q9Y2H9 1570 aa8.52□□□□□ -1.05
SNX29-206ENST00000568359 LRRC7Q96NW7 1537 aa8.51□□□□□ -1.05
SNX29-206ENST00000568359 TULP1O00294 542 aaPredicted RBP8.51□□□□□ -1.05
SNX29-206ENST00000568359 SCAF11Q99590 1463 aaKnown RBP8.51□□□□□ -1.05
SNX29-206ENST00000568359 CROCC2H7BZ55 1655 aa8.49□□□□□ -1.05
SNX29-206ENST00000568359 MROH1Q8NDA8 1641 aa8.49□□□□□ -1.05
SNX29-206ENST00000568359 DUOX2Q9NRD8 1548 aa8.49□□□□□ -1.05
SNX29-206ENST00000568359 XIRP1Q702N8 1843 aaKnown RBP8.48□□□□□ -1.05
SNX29-206ENST00000568359 EID1Q9Y6B2 187 aa8.48□□□□□ -1.05
SNX29-206ENST00000568359 LRRC9Q6ZRR7 1453 aa8.48□□□□□ -1.05
SNX29-206ENST00000568359 PRDM15P57071 1507 aaPredicted RBP8.48□□□□□ -1.05
SNX29-206ENST00000568359 PIK3C2BO00750 1634 aa8.47□□□□□ -1.05
SNX29-206ENST00000568359 STAG3Q9UJ98 1225 aa8.47□□□□□ -1.05
SNX29-206ENST00000568359 SLIT1O75093 1534 aa8.46□□□□□ -1.05
SNX29-206ENST00000568359 TXNDC2Q86VQ3 553 aa8.46□□□□□ -1.06
SNX29-206ENST00000568359 ROBO1Q9Y6N7 1651 aa8.46□□□□□ -1.06
SNX29-206ENST00000568359 MYOM3Q5VTT5 1437 aa8.46□□□□□ -1.06
SNX29-206ENST00000568359 VPS8Q8N3P4 1428 aa8.46□□□□□ -1.06
SNX29-206ENST00000568359 KDM5AP29375 1690 aaKnown RBP8.45□□□□□ -1.06
SNX29-206ENST00000568359 KANK1Q14678 1352 aa8.45□□□□□ -1.06
SNX29-206ENST00000568359 KIF15Q9NS87 1388 aa8.45□□□□□ -1.06
SNX29-206ENST00000568359 ERBINQ96RT1 1412 aa8.45□□□□□ -1.06
SNX29-206ENST00000568359 ARHGAP23Q9P227 1491 aa8.45□□□□□ -1.06
SNX29-206ENST00000568359 EFCAB6Q5THR3 1501 aa8.44□□□□□ -1.06
SNX29-206ENST00000568359 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.44□□□□□ -1.06
SNX29-206ENST00000568359 PTPN23Q9H3S7 1636 aa8.43□□□□□ -1.06
SNX29-206ENST00000568359 ARHGAP31Q2M1Z3 1444 aa8.43□□□□□ -1.06
SNX29-206ENST00000568359 PHLPP1O60346 1717 aa8.43□□□□□ -1.06
SNX29-206ENST00000568359 LTKP29376 864 aa8.42□□□□□ -1.06
SNX29-206ENST00000568359 TMEM2Q9UHN6 1383 aa8.42□□□□□ -1.06
SNX29-206ENST00000568359 SETD1AO15047 1707 aaKnown RBP8.42□□□□□ -1.06
SNX29-206ENST00000568359 ADGRB3O60242 1522 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms