RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 CLTCQ00610 1675 aaKnown RBP7.56□□□□□ -1.2
CLK3-219ENST00000567805 RSPH4AQ5TD94 716 aa7.55□□□□□ -1.2
CLK3-219ENST00000567805 MIA2Q96PC5 1412 aa7.54□□□□□ -1.2
CLK3-219ENST00000567805 KANK4Q5T7N3 995 aaPredicted RBP7.54□□□□□ -1.2
CLK3-219ENST00000567805 MAST1Q9Y2H9 1570 aa7.54□□□□□ -1.2
CLK3-219ENST00000567805 MYOM3Q5VTT5 1437 aa7.53□□□□□ -1.2
CLK3-219ENST00000567805 UHRF1BP1Q6BDS2 1440 aa7.53□□□□□ -1.2
CLK3-219ENST00000567805 CEBPAP49715 358 aaPredicted RBP7.53□□□□□ -1.2
CLK3-219ENST00000567805 APLP2Q06481 763 aa7.53□□□□□ -1.2
CLK3-219ENST00000567805 CROCC2H7BZ55 1655 aa7.53□□□□□ -1.2
CLK3-219ENST00000567805 STRCQ7RTU9 1775 aa7.52□□□□□ -1.21
CLK3-219ENST00000567805 DHX29Q7Z478 1369 aaKnown RBP7.52□□□□□ -1.21
CLK3-219ENST00000567805 PTPN23Q9H3S7 1636 aa7.52□□□□□ -1.21
CLK3-219ENST00000567805 FAM135AQ9P2D6 1515 aa7.52□□□□□ -1.21
CLK3-219ENST00000567805 NPATQ14207 1427 aa7.52□□□□□ -1.21
CLK3-219ENST00000567805 ZNF142P52746 1687 aaPredicted RBP7.51□□□□□ -1.21
CLK3-219ENST00000567805 TSPY4P0CV99 314 aa7.51□□□□□ -1.21
CLK3-219ENST00000567805 TSPY10P0CW01 314 aa7.51□□□□□ -1.21
CLK3-219ENST00000567805 HSPA2P54652 639 aa7.51□□□□□ -1.21
CLK3-219ENST00000567805 EIF2AK4Q9P2K8 1649 aaKnown RBP7.51□□□□□ -1.21
CLK3-219ENST00000567805 ZMYM3Q14202 1370 aa7.5□□□□□ -1.21
CLK3-219ENST00000567805 MYO3AQ8NEV4 1616 aa7.5□□□□□ -1.21
CLK3-219ENST00000567805 RNF17Q9BXT8 1623 aaKnown RBP7.5□□□□□ -1.21
CLK3-219ENST00000567805 GGT6Q6P531 493 aa7.5□□□□□ -1.21
CLK3-219ENST00000567805 KDM5DQ9BY66 1539 aa7.5□□□□□ -1.21
CLK3-219ENST00000567805 ZC3H13Q5T200 1668 aaKnown RBP7.5□□□□□ -1.21
CLK3-219ENST00000567805 SHANK2Q9UPX8 1470 aa7.49□□□□□ -1.21
CLK3-219ENST00000567805 DNMT1P26358 1616 aaKnown RBP7.49□□□□□ -1.21
CLK3-219ENST00000567805 KIF3BO15066 747 aa7.48□□□□□ -1.21
CLK3-219ENST00000567805 PTPRKQ15262 1439 aa7.48□□□□□ -1.21
CLK3-219ENST00000567805 FGD6Q6ZV73 1430 aa7.48□□□□□ -1.21
CLK3-219ENST00000567805 ILDR1Q86SU0 546 aaPredicted RBP7.48□□□□□ -1.21
CLK3-219ENST00000567805 TCOF1Q13428 1488 aaKnown RBP7.48□□□□□ -1.21
CLK3-219ENST00000567805 DUOX2Q9NRD8 1548 aa7.47□□□□□ -1.21
CLK3-219ENST00000567805 CEP170BQ9Y4F5 1589 aaPredicted RBP7.47□□□□□ -1.21
CLK3-219ENST00000567805 CAMSAP1Q5T5Y3 1602 aa7.46□□□□□ -1.21
CLK3-219ENST00000567805 PZPP20742 1482 aa7.46□□□□□ -1.22
CLK3-219ENST00000567805 CEP152O94986 1710 aa7.46□□□□□ -1.22
CLK3-219ENST00000567805 MROH1Q8NDA8 1641 aa7.45□□□□□ -1.22
CLK3-219ENST00000567805 ABCC5O15440 1437 aa7.45□□□□□ -1.22
CLK3-219ENST00000567805 DAPK1P53355 1430 aa7.45□□□□□ -1.22
CLK3-219ENST00000567805 NCOA1Q15788 1441 aa7.45□□□□□ -1.22
CLK3-219ENST00000567805 ABCC3O15438 1527 aa7.45□□□□□ -1.22
CLK3-219ENST00000567805 WASHC2CQ9Y4E1 1318 aa7.45□□□□□ -1.22
CLK3-219ENST00000567805 DEPDC5O75140 1603 aa7.45□□□□□ -1.22
CLK3-219ENST00000567805 PTPRTO14522 1441 aa7.44□□□□□ -1.22
CLK3-219ENST00000567805 ERBINQ96RT1 1412 aa7.44□□□□□ -1.22
CLK3-219ENST00000567805 POLR1AO95602 1720 aaPredicted RBP7.44□□□□□ -1.22
CLK3-219ENST00000567805 A2ML1A8K2U0 1454 aa7.44□□□□□ -1.22
CLK3-219ENST00000567805 PLA2R1Q13018 1463 aa7.44□□□□□ -1.22
CLK3-219ENST00000567805 PRDM15P57071 1507 aaPredicted RBP7.44□□□□□ -1.22
CLK3-219ENST00000567805 CFAP65Q6ZU64 1925 aaKnown RBP7.44□□□□□ -1.22
CLK3-219ENST00000567805 KIF15Q9NS87 1388 aa7.44□□□□□ -1.22
CLK3-219ENST00000567805 FBXO41Q8TF61 875 aa7.43□□□□□ -1.22
CLK3-219ENST00000567805 TNRQ92752 1358 aa7.43□□□□□ -1.22
CLK3-219ENST00000567805 NLRP1Q9C000 1473 aa7.43□□□□□ -1.22
CLK3-219ENST00000567805 SPATA31D1Q6ZQQ2 1576 aa7.42□□□□□ -1.22
CLK3-219ENST00000567805 ABCB7O75027 752 aa7.42□□□□□ -1.22
CLK3-219ENST00000567805 ANKRD30AQ9BXX3 1397 aa7.42□□□□□ -1.22
CLK3-219ENST00000567805 ADGRL2O95490 1459 aa7.42□□□□□ -1.22
CLK3-219ENST00000567805 PKD2Q13563 968 aa7.41□□□□□ -1.22
CLK3-219ENST00000567805 FBXO31Q5XUX0 539 aaPredicted RBP7.41□□□□□ -1.22
CLK3-219ENST00000567805 CERKQ8TCT0 537 aa7.41□□□□□ -1.22
CLK3-219ENST00000567805 RRP7BPQ9NSQ0 103 aa7.41□□□□□ -1.22
CLK3-219ENST00000567805 ERVK-7P63135 1459 aa7.4□□□□□ -1.22
CLK3-219ENST00000567805 UGGT1Q9NYU2 1555 aa7.4□□□□□ -1.22
CLK3-219ENST00000567805 LTBP4Q8N2S1 1624 aa7.4□□□□□ -1.22
CLK3-219ENST00000567805 UBR1Q8IWV7 1749 aa7.39□□□□□ -1.23
CLK3-219ENST00000567805 VWDEQ8N2E2 1590 aa7.39□□□□□ -1.23
CLK3-219ENST00000567805 NEURL4Q96JN8 1562 aa7.39□□□□□ -1.23
CLK3-219ENST00000567805 LMTK2Q8IWU2 1503 aa7.39□□□□□ -1.23
CLK3-219ENST00000567805 ARHGAP31Q2M1Z3 1444 aa7.39□□□□□ -1.23
CLK3-219ENST00000567805 NCKAP5LQ9HCH0 1330 aa7.39□□□□□ -1.23
CLK3-219ENST00000567805 FAM50AQ14320 339 aaKnown RBP7.39□□□□□ -1.23
CLK3-219ENST00000567805 CHIC2Q9UKJ5 165 aa7.39□□□□□ -1.23
CLK3-219ENST00000567805 KDM5AP29375 1690 aaKnown RBP7.38□□□□□ -1.23
CLK3-219ENST00000567805 IQSEC2Q5JU85 1478 aa7.38□□□□□ -1.23
CLK3-219ENST00000567805 KANK1Q14678 1352 aa7.38□□□□□ -1.23
CLK3-219ENST00000567805 EFCAB6Q5THR3 1501 aa7.37□□□□□ -1.23
CLK3-219ENST00000567805 THEMISQ8N1K5 641 aaPredicted RBP7.37□□□□□ -1.23
CLK3-219ENST00000567805 IQGAP1P46940 1657 aa7.37□□□□□ -1.23
CLK3-219ENST00000567805 GCC2Q8IWJ2 1684 aa7.37□□□□□ -1.23
CLK3-219ENST00000567805 UNC13BO14795 1591 aa7.37□□□□□ -1.23
CLK3-219ENST00000567805 ANKRD50Q9ULJ7 1429 aa7.36□□□□□ -1.23
CLK3-219ENST00000567805 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.36□□□□□ -1.23
CLK3-219ENST00000567805 TET3O43151 1660 aa7.36□□□□□ -1.23
CLK3-219ENST00000567805 PIK3C2BO00750 1634 aa7.36□□□□□ -1.23
CLK3-219ENST00000567805 MED14O60244 1454 aa7.36□□□□□ -1.23
CLK3-219ENST00000567805 ROCK1Q13464 1354 aa7.35□□□□□ -1.23
CLK3-219ENST00000567805 SLC4A2P04920 1241 aa7.35□□□□□ -1.23
CLK3-219ENST00000567805 ANKLE2Q86XL3 938 aa7.35□□□□□ -1.23
CLK3-219ENST00000567805 RPRD2Q5VT52 1461 aaKnown RBP7.35□□□□□ -1.23
CLK3-219ENST00000567805 SYNMO15061 1565 aa7.34□□□□□ -1.23
CLK3-219ENST00000567805 ZNF335Q9H4Z2 1342 aaPredicted RBP7.34□□□□□ -1.23
CLK3-219ENST00000567805 SLIT1O75093 1534 aa7.34□□□□□ -1.23
CLK3-219ENST00000567805 IQGAP3Q86VI3 1631 aa7.34□□□□□ -1.24
CLK3-219ENST00000567805 CPS1P31327 1500 aa7.33□□□□□ -1.24
CLK3-219ENST00000567805 ARHGAP23Q9P227 1491 aa7.33□□□□□ -1.24
CLK3-219ENST00000567805 MYO5BQ9ULV0 1848 aa7.33□□□□□ -1.24
CLK3-219ENST00000567805 NPHP4O75161 1426 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms