RNA–Protein interactions for RNA: ENST00000567284.6

FANCA-223, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-223	ENST00000567284	GGT6	Q6P531	493 aa		13.92	□□□□□ -0.18
FANCA-223	ENST00000567284	RERE	Q9P2R6	1566 aa		13.92	□□□□□ -0.18
FANCA-223	ENST00000567284	UNC13B	O14795	1591 aa		13.91	□□□□□ -0.18
FANCA-223	ENST00000567284	BCORL1	Q5H9F3	1711 aa		13.9	□□□□□ -0.18
FANCA-223	ENST00000567284	DEPDC5	O75140	1603 aa		13.9	□□□□□ -0.19
FANCA-223	ENST00000567284	RNF17	Q9BXT8	1623 aa	Known RBP	13.9	□□□□□ -0.19
FANCA-223	ENST00000567284	NUP155	O75694	1391 aa		13.87	□□□□□ -0.19
FANCA-223	ENST00000567284	MROH1	Q8NDA8	1641 aa		13.87	□□□□□ -0.19
FANCA-223	ENST00000567284	AGL	P35573	1532 aa		13.87	□□□□□ -0.19
FANCA-223	ENST00000567284	CLTC	Q00610	1675 aa	Known RBP	13.86	□□□□□ -0.19
FANCA-223	ENST00000567284	IQGAP3	Q86VI3	1631 aa		13.86	□□□□□ -0.19
FANCA-223	ENST00000567284	KANK1	Q14678	1352 aa		13.85	□□□□□ -0.19
FANCA-223	ENST00000567284	HRC	P23327	699 aa		13.85	□□□□□ -0.19
FANCA-223	ENST00000567284	FER1L4	A9Z1Z3	1794 aa		13.85	□□□□□ -0.19
FANCA-223	ENST00000567284	PRDM15	P57071	1507 aa	Predicted RBP	13.85	□□□□□ -0.19
FANCA-223	ENST00000567284	PZP	P20742	1482 aa		13.83	□□□□□ -0.2
FANCA-223	ENST00000567284	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.83	□□□□□ -0.2
FANCA-223	ENST00000567284	FAM135A	Q9P2D6	1515 aa		13.83	□□□□□ -0.2
FANCA-223	ENST00000567284	KDM5D	Q9BY66	1539 aa		13.82	□□□□□ -0.2
FANCA-223	ENST00000567284	MPHOSPH9	Q99550	1183 aa		13.82	□□□□□ -0.2
FANCA-223	ENST00000567284	ESF1	Q9H501	851 aa	Known RBP	13.82	□□□□□ -0.2
FANCA-223	ENST00000567284	WASHC2C	Q9Y4E1	1318 aa		13.82	□□□□□ -0.2
FANCA-223	ENST00000567284	CAMSAP1	Q5T5Y3	1602 aa		13.82	□□□□□ -0.2
FANCA-223	ENST00000567284	TET3	O43151	1660 aa		13.82	□□□□□ -0.2
FANCA-223	ENST00000567284	ZC3H13	Q5T200	1668 aa	Known RBP	13.82	□□□□□ -0.2
FANCA-223	ENST00000567284	CCER1	Q8TC90	406 aa	Predicted RBP	13.81	□□□□□ -0.2
FANCA-223	ENST00000567284		E9PCH4	1651 aa		13.81	□□□□□ -0.2
FANCA-223	ENST00000567284	VWDE	Q8N2E2	1590 aa		13.8	□□□□□ -0.2
FANCA-223	ENST00000567284	RIMS1	Q86UR5	1692 aa	Known RBP	13.8	□□□□□ -0.2
FANCA-223	ENST00000567284	FOXD1	Q16676	465 aa		13.8	□□□□□ -0.2
FANCA-223	ENST00000567284	PLPPR3	Q6T4P5	718 aa		13.8	□□□□□ -0.2
FANCA-223	ENST00000567284	ACIN1	Q9UKV3	1341 aa	Known RBP	13.8	□□□□□ -0.2
FANCA-223	ENST00000567284	DHX57	Q6P158	1386 aa	Known RBP	13.8	□□□□□ -0.2
FANCA-223	ENST00000567284	ABCC3	O15438	1527 aa		13.8	□□□□□ -0.2
FANCA-223	ENST00000567284	PKD2	Q13563	968 aa		13.79	□□□□□ -0.2
FANCA-223	ENST00000567284	MADD	Q8WXG6	1647 aa		13.79	□□□□□ -0.2
FANCA-223	ENST00000567284	ADAMTSL3	P82987	1691 aa		13.76	□□□□□ -0.21
FANCA-223	ENST00000567284	AEBP2	Q6ZN18	517 aa	Predicted RBP	13.76	□□□□□ -0.21
FANCA-223	ENST00000567284	SPHKAP	Q2M3C7	1700 aa		13.76	□□□□□ -0.21
FANCA-223	ENST00000567284	MROH2A	A6NES4	1674 aa		13.75	□□□□□ -0.21
FANCA-223	ENST00000567284	EFCAB6	Q5THR3	1501 aa		13.75	□□□□□ -0.21
FANCA-223	ENST00000567284	C3	P01024	1663 aa		13.75	□□□□□ -0.21
FANCA-223	ENST00000567284	LMTK2	Q8IWU2	1503 aa		13.74	□□□□□ -0.21
FANCA-223	ENST00000567284	PPP6R1	Q9UPN7	881 aa		13.74	□□□□□ -0.21
FANCA-223	ENST00000567284	PREX1	Q8TCU6	1659 aa		13.73	□□□□□ -0.21
FANCA-223	ENST00000567284	CNTLN	Q9NXG0	1405 aa		13.71	□□□□□ -0.22
FANCA-223	ENST00000567284	ZMYM3	Q14202	1370 aa		13.71	□□□□□ -0.22
FANCA-223	ENST00000567284	CEBPA	P49715	358 aa	Predicted RBP	13.7	□□□□□ -0.22
FANCA-223	ENST00000567284	NPAT	Q14207	1427 aa		13.7	□□□□□ -0.22
FANCA-223	ENST00000567284	NEUROD1	Q13562	356 aa		13.69	□□□□□ -0.22
FANCA-223	ENST00000567284	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.69	□□□□□ -0.22
FANCA-223	ENST00000567284	ILDR1	Q86SU0	546 aa	Predicted RBP	13.69	□□□□□ -0.22
FANCA-223	ENST00000567284	SIN3A	Q96ST3	1273 aa		13.69	□□□□□ -0.22
FANCA-223	ENST00000567284	KIF1B	O60333	1816 aa		13.69	□□□□□ -0.22
FANCA-223	ENST00000567284	MYO5B	Q9ULV0	1848 aa		13.67	□□□□□ -0.22
FANCA-223	ENST00000567284	CLTCL1	P53675	1640 aa		13.67	□□□□□ -0.22
FANCA-223	ENST00000567284	RPRD2	Q5VT52	1461 aa	Known RBP	13.67	□□□□□ -0.22
FANCA-223	ENST00000567284	ARHGAP31	Q2M1Z3	1444 aa		13.66	□□□□□ -0.22
FANCA-223	ENST00000567284	ANKRD30B	Q9BXX2	1392 aa		13.66	□□□□□ -0.22
FANCA-223	ENST00000567284	ERVK-7	P63135	1459 aa		13.66	□□□□□ -0.22
FANCA-223	ENST00000567284	SYNM	O15061	1565 aa		13.66	□□□□□ -0.22
FANCA-223	ENST00000567284	UGGT1	Q9NYU2	1555 aa		13.66	□□□□□ -0.22
FANCA-223	ENST00000567284	TRPM2	O94759	1503 aa		13.64	□□□□□ -0.23
FANCA-223	ENST00000567284	PLA2R1	Q13018	1463 aa		13.64	□□□□□ -0.23
FANCA-223	ENST00000567284	KDM4F	A0A1W2PPD8	638 aa		13.64	□□□□□ -0.23
FANCA-223	ENST00000567284	CHGA	P10645	457 aa	Known RBP	13.64	□□□□□ -0.23
FANCA-223	ENST00000567284	SPATA31D1	Q6ZQQ2	1576 aa		13.63	□□□□□ -0.23
FANCA-223	ENST00000567284	CCDC144A	A2RUR9	1427 aa		13.63	□□□□□ -0.23
FANCA-223	ENST00000567284	PTPRT	O14522	1441 aa		13.63	□□□□□ -0.23
FANCA-223	ENST00000567284	PTPRM	P28827	1452 aa		13.62	□□□□□ -0.23
FANCA-223	ENST00000567284	NOS1	P29475	1434 aa		13.62	□□□□□ -0.23
FANCA-223	ENST00000567284	SETD1B	Q9UPS6	1966 aa	Known RBP	13.62	□□□□□ -0.23
FANCA-223	ENST00000567284	TNR	Q92752	1358 aa		13.61	□□□□□ -0.23
FANCA-223	ENST00000567284	PIK3C2B	O00750	1634 aa		13.61	□□□□□ -0.23
FANCA-223	ENST00000567284	CLSPN	Q9HAW4	1339 aa		13.6	□□□□□ -0.23
FANCA-223	ENST00000567284	STAG3	Q9UJ98	1225 aa		13.59	□□□□□ -0.23
FANCA-223	ENST00000567284	MYO3A	Q8NEV4	1616 aa		13.59	□□□□□ -0.23
FANCA-223	ENST00000567284	IDI1	Q13907	227 aa		13.58	□□□□□ -0.24
FANCA-223	ENST00000567284	RGL3	Q3MIN7	710 aa		13.58	□□□□□ -0.24
FANCA-223	ENST00000567284	ZNF326	Q5BKZ1	582 aa	Known RBP	13.56	□□□□□ -0.24
FANCA-223	ENST00000567284	TONSL	Q96HA7	1378 aa		13.56	□□□□□ -0.24
FANCA-223	ENST00000567284	UBR1	Q8IWV7	1749 aa		13.56	□□□□□ -0.24
FANCA-223	ENST00000567284	TMEM131L	A2VDJ0	1609 aa		13.55	□□□□□ -0.24
FANCA-223	ENST00000567284	SLC52A1	Q9NWF4	448 aa		13.55	□□□□□ -0.24
FANCA-223	ENST00000567284	ADGRB3	O60242	1522 aa		13.54	□□□□□ -0.24
FANCA-223	ENST00000567284	KDM2A	Q9Y2K7	1162 aa		13.53	□□□□□ -0.24
FANCA-223	ENST00000567284	IFT172	Q9UG01	1749 aa		13.53	□□□□□ -0.24
FANCA-223	ENST00000567284	PPL	O60437	1756 aa		13.53	□□□□□ -0.24
FANCA-223	ENST00000567284	NLRP1	Q9C000	1473 aa		13.52	□□□□□ -0.25
FANCA-223	ENST00000567284	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.52	□□□□□ -0.25
FANCA-223	ENST00000567284	ZNF142	P52746	1687 aa	Predicted RBP	13.52	□□□□□ -0.25
FANCA-223	ENST00000567284	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.51	□□□□□ -0.25
FANCA-223	ENST00000567284	L3MBTL2	Q969R5	705 aa		13.51	□□□□□ -0.25
FANCA-223	ENST00000567284	SENP3	Q9H4L4	574 aa	Predicted RBP	13.51	□□□□□ -0.25
FANCA-223	ENST00000567284	A2ML1	A8K2U0	1454 aa		13.5	□□□□□ -0.25
FANCA-223	ENST00000567284	UHRF1BP1	Q6BDS2	1440 aa		13.5	□□□□□ -0.25
FANCA-223	ENST00000567284	SPATA31E1	Q6ZUB1	1445 aa		13.5	□□□□□ -0.25
FANCA-223	ENST00000567284	DCAF11	Q8TEB1	546 aa		13.5	□□□□□ -0.25
FANCA-223	ENST00000567284	KDM5A	P29375	1690 aa	Known RBP	13.5	□□□□□ -0.25
FANCA-223	ENST00000567284	ZEB1	P37275	1124 aa	Predicted RBP	13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms