RNA–Protein interactions for RNA: ENST00000567195.5

COMMD4-217, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-217ENST00000567195 ITGAEP38570 1179 aa23.89■■□□□ 1.41
COMMD4-217ENST00000567195 ERBINQ96RT1 1412 aa23.89■■□□□ 1.41
COMMD4-217ENST00000567195 RRBP1Q9P2E9 1410 aaKnown RBP23.89■■□□□ 1.41
COMMD4-217ENST00000567195 ZMYM3Q14202 1370 aa23.89■■□□□ 1.41
COMMD4-217ENST00000567195 MROH2AA6NES4 1674 aa23.88■■□□□ 1.41
COMMD4-217ENST00000567195 CLTCQ00610 1675 aaKnown RBP23.88■■□□□ 1.41
COMMD4-217ENST00000567195 WASHC2CQ9Y4E1 1318 aa23.87■■□□□ 1.41
COMMD4-217ENST00000567195 C3P01024 1663 aa23.87■■□□□ 1.41
COMMD4-217ENST00000567195 PTPRKQ15262 1439 aa23.85■■□□□ 1.41
COMMD4-217ENST00000567195 FAM135AQ9P2D6 1515 aa23.85■■□□□ 1.41
COMMD4-217ENST00000567195 RNF17Q9BXT8 1623 aaKnown RBP23.84■■□□□ 1.41
COMMD4-217ENST00000567195 PREX1Q8TCU6 1659 aa23.84■■□□□ 1.41
COMMD4-217ENST00000567195 KDM5DQ9BY66 1539 aa23.84■■□□□ 1.41
COMMD4-217ENST00000567195 ROCK1Q13464 1354 aa23.82■■□□□ 1.4
COMMD4-217ENST00000567195 LMTK3Q96Q04 1460 aa23.81■■□□□ 1.4
COMMD4-217ENST00000567195 UHRF1BP1Q6BDS2 1440 aa23.79■■□□□ 1.4
COMMD4-217ENST00000567195 NPATQ14207 1427 aa23.78■■□□□ 1.4
COMMD4-217ENST00000567195 ANKRD50Q9ULJ7 1429 aa23.78■■□□□ 1.4
COMMD4-217ENST00000567195 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.78■■□□□ 1.4
COMMD4-217ENST00000567195 KANK1Q14678 1352 aa23.77■■□□□ 1.4
COMMD4-217ENST00000567195 MROH1Q8NDA8 1641 aa23.75■■□□□ 1.39
COMMD4-217ENST00000567195 ZC3H13Q5T200 1668 aaKnown RBP23.75■■□□□ 1.39
COMMD4-217ENST00000567195 ABCC3O15438 1527 aa23.74■■□□□ 1.39
COMMD4-217ENST00000567195 PRDM15P57071 1507 aaPredicted RBP23.74■■□□□ 1.39
COMMD4-217ENST00000567195 PZPP20742 1482 aa23.72■■□□□ 1.39
COMMD4-217ENST00000567195 DEPDC5O75140 1603 aa23.72■■□□□ 1.39
COMMD4-217ENST00000567195 HSPA2P54652 639 aa23.7■■□□□ 1.38
COMMD4-217ENST00000567195 FBXO31Q5XUX0 539 aaPredicted RBP23.69■■□□□ 1.38
COMMD4-217ENST00000567195 CEP152O94986 1710 aa23.69■■□□□ 1.38
COMMD4-217ENST00000567195 CAMSAP1Q5T5Y3 1602 aa23.66■■□□□ 1.38
COMMD4-217ENST00000567195 TNRQ92752 1358 aa23.65■■□□□ 1.38
COMMD4-217ENST00000567195 DMRT2Q9Y5R5 561 aa23.65■■□□□ 1.38
COMMD4-217ENST00000567195 VWDEQ8N2E2 1590 aa23.63■■□□□ 1.37
COMMD4-217ENST00000567195 LMTK2Q8IWU2 1503 aa23.63■■□□□ 1.37
COMMD4-217ENST00000567195 ARHGAP31Q2M1Z3 1444 aa23.62■■□□□ 1.37
COMMD4-217ENST00000567195 MYO3AQ8NEV4 1616 aa23.61■■□□□ 1.37
COMMD4-217ENST00000567195 UNC13BO14795 1591 aa23.6■■□□□ 1.37
COMMD4-217ENST00000567195 ERVK-7P63135 1459 aa23.59■■□□□ 1.37
COMMD4-217ENST00000567195 NAIPQ13075 1403 aa23.59■■□□□ 1.37
COMMD4-217ENST00000567195 SPATA31D1Q6ZQQ2 1576 aa23.57■■□□□ 1.36
COMMD4-217ENST00000567195 CEP170BQ9Y4F5 1589 aaPredicted RBP23.57■■□□□ 1.36
COMMD4-217ENST00000567195 A2ML1A8K2U0 1454 aa23.56■■□□□ 1.36
COMMD4-217ENST00000567195 NUP155O75694 1391 aa23.56■■□□□ 1.36
COMMD4-217ENST00000567195 ZNF142P52746 1687 aaPredicted RBP23.56■■□□□ 1.36
COMMD4-217ENST00000567195 HFM1A2PYH4 1435 aa23.56■■□□□ 1.36
COMMD4-217ENST00000567195 NLRP1Q9C000 1473 aa23.56■■□□□ 1.36
COMMD4-217ENST00000567195 CFAP65Q6ZU64 1925 aaKnown RBP23.55■■□□□ 1.36
COMMD4-217ENST00000567195 GCC2Q8IWJ2 1684 aa23.55■■□□□ 1.36
COMMD4-217ENST00000567195 EFCAB6Q5THR3 1501 aa23.54■■□□□ 1.36
COMMD4-217ENST00000567195 TET3O43151 1660 aa23.51■■□□□ 1.35
COMMD4-217ENST00000567195 IQGAP3Q86VI3 1631 aa23.51■■□□□ 1.35
COMMD4-217ENST00000567195 STRCQ7RTU9 1775 aa23.5■■□□□ 1.35
COMMD4-217ENST00000567195 RPRD2Q5VT52 1461 aaKnown RBP23.49■■□□□ 1.35
COMMD4-217ENST00000567195 THEMISQ8N1K5 641 aaPredicted RBP23.49■■□□□ 1.35
COMMD4-217ENST00000567195 PKD2Q13563 968 aa23.48■■□□□ 1.35
COMMD4-217ENST00000567195 UGGT1Q9NYU2 1555 aa23.48■■□□□ 1.35
COMMD4-217ENST00000567195 TRIM52Q96A61 297 aa23.47■■□□□ 1.35
COMMD4-217ENST00000567195 PLA2R1Q13018 1463 aa23.47■■□□□ 1.35
COMMD4-217ENST00000567195 PTPRTO14522 1441 aa23.45■■□□□ 1.34
COMMD4-217ENST00000567195 NOS1P29475 1434 aa23.45■■□□□ 1.34
COMMD4-217ENST00000567195 STAG3Q9UJ98 1225 aa23.43■■□□□ 1.34
COMMD4-217ENST00000567195 NCKAP5LQ9HCH0 1330 aa23.42■■□□□ 1.34
COMMD4-217ENST00000567195 SLC52A1Q9NWF4 448 aa23.42■■□□□ 1.34
COMMD4-217ENST00000567195 E9PCH4 1651 aa23.41■■□□□ 1.34
COMMD4-217ENST00000567195 IDI1Q13907 227 aa23.41■■□□□ 1.34
COMMD4-217ENST00000567195 SYNMO15061 1565 aa23.4■■□□□ 1.34
COMMD4-217ENST00000567195 ANKLE2Q86XL3 938 aa23.4■■□□□ 1.34
COMMD4-217ENST00000567195 ACIN1Q9UKV3 1341 aaKnown RBP23.39■■□□□ 1.34
COMMD4-217ENST00000567195 SETD5Q9C0A6 1442 aa23.39■■□□□ 1.33
COMMD4-217ENST00000567195 PIK3C2BO00750 1634 aa23.37■■□□□ 1.33
COMMD4-217ENST00000567195 UBR1Q8IWV7 1749 aa23.36■■□□□ 1.33
COMMD4-217ENST00000567195 SLC4A1APQ9BWU0 796 aaKnown RBP23.36■■□□□ 1.33
COMMD4-217ENST00000567195 POLR1AO95602 1720 aaPredicted RBP23.35■■□□□ 1.33
COMMD4-217ENST00000567195 KDM5AP29375 1690 aaKnown RBP23.32■■□□□ 1.32
COMMD4-217ENST00000567195 EID1Q9Y6B2 187 aa23.31■■□□□ 1.32
COMMD4-217ENST00000567195 ADGRB3O60242 1522 aa23.29■■□□□ 1.32
COMMD4-217ENST00000567195 CHGAP10645 457 aaKnown RBP23.29■■□□□ 1.32
COMMD4-217ENST00000567195 CERKQ8TCT0 537 aa23.29■■□□□ 1.32
COMMD4-217ENST00000567195 SLIT1O75093 1534 aa23.28■■□□□ 1.32
COMMD4-217ENST00000567195 RAB3GAP2Q9H2M9 1393 aa23.28■■□□□ 1.32
COMMD4-217ENST00000567195 TMEM2Q9UHN6 1383 aa23.28■■□□□ 1.32
COMMD4-217ENST00000567195 TXNDC2Q86VQ3 553 aa23.28■■□□□ 1.32
COMMD4-217ENST00000567195 FBXO41Q8TF61 875 aa23.28■■□□□ 1.32
COMMD4-217ENST00000567195 SPHKAPQ2M3C7 1700 aa23.28■■□□□ 1.32
COMMD4-217ENST00000567195 ARHGAP23Q9P227 1491 aa23.27■■□□□ 1.32
COMMD4-217ENST00000567195 MPHOSPH9Q99550 1183 aa23.26■■□□□ 1.31
COMMD4-217ENST00000567195 NEURL4Q96JN8 1562 aa23.26■■□□□ 1.31
COMMD4-217ENST00000567195 NPHP4O75161 1426 aaPredicted RBP23.25■■□□□ 1.31
COMMD4-217ENST00000567195 MED14O60244 1454 aa23.25■■□□□ 1.31
COMMD4-217ENST00000567195 SCAF11Q99590 1463 aaKnown RBP23.25■■□□□ 1.31
COMMD4-217ENST00000567195 ILDR1Q86SU0 546 aaPredicted RBP23.25■■□□□ 1.31
COMMD4-217ENST00000567195 LTKP29376 864 aa23.24■■□□□ 1.31
COMMD4-217ENST00000567195 HDGFP51858 240 aaKnown RBP23.24■■□□□ 1.31
COMMD4-217ENST00000567195 HRCP23327 699 aa23.23■■□□□ 1.31
COMMD4-217ENST00000567195 TMEM131LA2VDJ0 1609 aa23.22■■□□□ 1.31
COMMD4-217ENST00000567195 TRPM2O94759 1503 aa23.21■■□□□ 1.31
COMMD4-217ENST00000567195 IQGAP1P46940 1657 aa23.19■■□□□ 1.3
COMMD4-217ENST00000567195 FOXD1Q16676 465 aa23.19■■□□□ 1.3
COMMD4-217ENST00000567195 MYO5BQ9ULV0 1848 aa23.18■■□□□ 1.3
COMMD4-217ENST00000567195 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms