RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 TRHP20396 242 aaPredicted RBP9.04□□□□□ -0.96
GINS3-206ENST00000567143 MTUS2Q5JR59 1369 aa9.04□□□□□ -0.96
GINS3-206ENST00000567143 ZC3H13Q5T200 1668 aaKnown RBP9.03□□□□□ -0.96
GINS3-206ENST00000567143 PTPN23Q9H3S7 1636 aa9.03□□□□□ -0.96
GINS3-206ENST00000567143 ATP10AO60312 1499 aa9.03□□□□□ -0.96
GINS3-206ENST00000567143 C9orf84Q5VXU9 1444 aa9.03□□□□□ -0.96
GINS3-206ENST00000567143 SYCP2Q9BX26 1530 aa9.03□□□□□ -0.96
GINS3-206ENST00000567143 SCAPERQ9BY12 1400 aa9.02□□□□□ -0.96
GINS3-206ENST00000567143 ATP7AQ04656 1500 aa9.02□□□□□ -0.96
GINS3-206ENST00000567143 KDM5DQ9BY66 1539 aa9.02□□□□□ -0.96
GINS3-206ENST00000567143 CCDC141Q6ZP82 1450 aa9.02□□□□□ -0.97
GINS3-206ENST00000567143 DEPDC5O75140 1603 aa9.02□□□□□ -0.97
GINS3-206ENST00000567143 ZNF326Q5BKZ1 582 aaKnown RBP9.02□□□□□ -0.97
GINS3-206ENST00000567143 CCDC184Q52MB2 194 aa9.01□□□□□ -0.97
GINS3-206ENST00000567143 FGD6Q6ZV73 1430 aa9□□□□□ -0.97
GINS3-206ENST00000567143 TRAPPC8Q9Y2L5 1435 aa9□□□□□ -0.97
GINS3-206ENST00000567143 KDM5AP29375 1690 aaKnown RBP9□□□□□ -0.97
GINS3-206ENST00000567143 VWDEQ8N2E2 1590 aa8.99□□□□□ -0.97
GINS3-206ENST00000567143 ERICH6Q7L0X2 663 aa8.99□□□□□ -0.97
GINS3-206ENST00000567143 PPP6R1Q9UPN7 881 aa8.98□□□□□ -0.97
GINS3-206ENST00000567143 HSPA5P11021 654 aaKnown RBP8.97□□□□□ -0.97
GINS3-206ENST00000567143 B4GALNT3Q6L9W6 998 aa8.97□□□□□ -0.97
GINS3-206ENST00000567143 ROCK1Q13464 1354 aa8.97□□□□□ -0.97
GINS3-206ENST00000567143 LMTK2Q8IWU2 1503 aa8.97□□□□□ -0.97
GINS3-206ENST00000567143 DUOX2Q9NRD8 1548 aa8.96□□□□□ -0.97
GINS3-206ENST00000567143 ZNF142P52746 1687 aaPredicted RBP8.96□□□□□ -0.97
GINS3-206ENST00000567143 MROH1Q8NDA8 1641 aa8.96□□□□□ -0.97
GINS3-206ENST00000567143 ERBINQ96RT1 1412 aa8.96□□□□□ -0.98
GINS3-206ENST00000567143 PRDM15P57071 1507 aaPredicted RBP8.95□□□□□ -0.98
GINS3-206ENST00000567143 ABCC5O15440 1437 aa8.95□□□□□ -0.98
GINS3-206ENST00000567143 MSH5O43196 834 aa8.95□□□□□ -0.98
GINS3-206ENST00000567143 BCL11AQ9H165 835 aa8.95□□□□□ -0.98
GINS3-206ENST00000567143 MRS2Q9HD23 443 aa8.95□□□□□ -0.98
GINS3-206ENST00000567143 DAPK1P53355 1430 aa8.95□□□□□ -0.98
GINS3-206ENST00000567143 YEATS2Q9ULM3 1422 aa8.95□□□□□ -0.98
GINS3-206ENST00000567143 UNC13BO14795 1591 aa8.94□□□□□ -0.98
GINS3-206ENST00000567143 A2MP01023 1474 aa8.94□□□□□ -0.98
GINS3-206ENST00000567143 PTPRKQ15262 1439 aa8.94□□□□□ -0.98
GINS3-206ENST00000567143 CNTLNQ9NXG0 1405 aa8.94□□□□□ -0.98
GINS3-206ENST00000567143 CCER2I3L3R5 266 aa8.93□□□□□ -0.98
GINS3-206ENST00000567143 DHX29Q7Z478 1369 aaKnown RBP8.93□□□□□ -0.98
GINS3-206ENST00000567143 SALL2Q9Y467 1007 aaPredicted RBP8.93□□□□□ -0.98
GINS3-206ENST00000567143 WASHC2AQ641Q2 1341 aa8.93□□□□□ -0.98
GINS3-206ENST00000567143 C11orf95C9JLR9 678 aaPredicted RBP8.93□□□□□ -0.98
GINS3-206ENST00000567143 GCC2Q8IWJ2 1684 aa8.93□□□□□ -0.98
GINS3-206ENST00000567143 FER1L4A9Z1Z3 1794 aa8.93□□□□□ -0.98
GINS3-206ENST00000567143 CFDP1Q9UEE9 299 aaPredicted RBP8.92□□□□□ -0.98
GINS3-206ENST00000567143 L3MBTL2Q969R5 705 aa8.92□□□□□ -0.98
GINS3-206ENST00000567143 ZNF777Q9ULD5 760 aaPredicted RBP8.91□□□□□ -0.98
GINS3-206ENST00000567143 NPATQ14207 1427 aa8.91□□□□□ -0.98
GINS3-206ENST00000567143 EIF4G2P78344 907 aaKnown RBP eCLIP8.91□□□□□ -0.98
GINS3-206ENST00000567143 ARHGAP31Q2M1Z3 1444 aa8.9□□□□□ -0.98
GINS3-206ENST00000567143 NBR1Q14596 966 aa8.9□□□□□ -0.98
GINS3-206ENST00000567143 MADDQ8WXG6 1647 aa8.9□□□□□ -0.98
GINS3-206ENST00000567143 NCOA1Q15788 1441 aa8.89□□□□□ -0.99
GINS3-206ENST00000567143 RAPGEF3O95398 923 aa8.89□□□□□ -0.99
GINS3-206ENST00000567143 PREX1Q8TCU6 1659 aa8.88□□□□□ -0.99
GINS3-206ENST00000567143 NEURL4Q96JN8 1562 aa8.88□□□□□ -0.99
GINS3-206ENST00000567143 C3P01024 1663 aa8.88□□□□□ -0.99
GINS3-206ENST00000567143 ZNF644Q9H582 1327 aaPredicted RBP8.88□□□□□ -0.99
GINS3-206ENST00000567143 IQGAP3Q86VI3 1631 aa8.87□□□□□ -0.99
GINS3-206ENST00000567143 KDM4FA0A1W2PPD8 638 aa8.87□□□□□ -0.99
GINS3-206ENST00000567143 PTPRMP28827 1452 aa8.87□□□□□ -0.99
GINS3-206ENST00000567143 MPHOSPH9Q99550 1183 aa8.87□□□□□ -0.99
GINS3-206ENST00000567143 SPATA31D1Q6ZQQ2 1576 aa8.87□□□□□ -0.99
GINS3-206ENST00000567143 SLC4A1APQ9BWU0 796 aaKnown RBP8.87□□□□□ -0.99
GINS3-206ENST00000567143 TIMELESSQ9UNS1 1208 aa8.87□□□□□ -0.99
GINS3-206ENST00000567143 SPAG9O60271 1321 aaKnown RBP8.86□□□□□ -0.99
GINS3-206ENST00000567143 ABCC3O15438 1527 aa8.86□□□□□ -0.99
GINS3-206ENST00000567143 NBPF8Q3BBV2 869 aa8.86□□□□□ -0.99
GINS3-206ENST00000567143 RPRD2Q5VT52 1461 aaKnown RBP8.85□□□□□ -0.99
GINS3-206ENST00000567143 RIMS1Q86UR5 1692 aaKnown RBP8.85□□□□□ -0.99
GINS3-206ENST00000567143 AFAP1Q8N556 730 aa8.85□□□□□ -0.99
GINS3-206ENST00000567143 CAMSAP1Q5T5Y3 1602 aa8.85□□□□□ -0.99
GINS3-206ENST00000567143 KDM2AQ9Y2K7 1162 aa8.85□□□□□ -0.99
GINS3-206ENST00000567143 TET3O43151 1660 aa8.84□□□□□ -0.99
GINS3-206ENST00000567143 PZPP20742 1482 aa8.84□□□□□ -0.99
GINS3-206ENST00000567143 NAIPQ13075 1403 aa8.84□□□□□ -0.99
GINS3-206ENST00000567143 PRKRIP1Q9H875 184 aaPredicted RBP8.84□□□□□ -0.99
GINS3-206ENST00000567143 ANKRD30AQ9BXX3 1397 aa8.83□□□□□ -1
GINS3-206ENST00000567143 CLTCQ00610 1675 aaKnown RBP8.83□□□□□ -1
GINS3-206ENST00000567143 HFM1A2PYH4 1435 aa8.83□□□□□ -1
GINS3-206ENST00000567143 PIK3C2BO00750 1634 aa8.83□□□□□ -1
GINS3-206ENST00000567143 HNRNPMP52272 730 aaKnown RBP eCLIP8.83□□□□□ -1
GINS3-206ENST00000567143 NPM2Q86SE8 214 aaKnown RBP8.83□□□□□ -1
GINS3-206ENST00000567143 EFCAB6Q5THR3 1501 aa8.82□□□□□ -1
GINS3-206ENST00000567143 PPP4R2Q9NY27 417 aa8.81□□□□□ -1
GINS3-206ENST00000567143 MYO3AQ8NEV4 1616 aa8.81□□□□□ -1
GINS3-206ENST00000567143 KIF15Q9NS87 1388 aa8.8□□□□□ -1
GINS3-206ENST00000567143 CCDC136Q96JN2 1154 aa8.8□□□□□ -1
GINS3-206ENST00000567143 KIF7Q2M1P5 1343 aa8.8□□□□□ -1
GINS3-206ENST00000567143 PLA2R1Q13018 1463 aa8.79□□□□□ -1
GINS3-206ENST00000567143 LMTK3Q96Q04 1460 aa8.79□□□□□ -1
GINS3-206ENST00000567143 PAK3O75914 559 aaPredicted RBP8.79□□□□□ -1
GINS3-206ENST00000567143 NOS1P29475 1434 aa8.79□□□□□ -1
GINS3-206ENST00000567143 NLRP1Q9C000 1473 aa8.79□□□□□ -1
GINS3-206ENST00000567143 CEP152O94986 1710 aa8.78□□□□□ -1
GINS3-206ENST00000567143 TSPY4P0CV99 314 aa8.78□□□□□ -1
GINS3-206ENST00000567143 TSPY10P0CW01 314 aa8.78□□□□□ -1
GINS3-206ENST00000567143 SETD1BQ9UPS6 1966 aaKnown RBP8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms