RNA–Protein interactions for RNA: ENST00000566901.5

CFDP1-207, Transcript of craniofacial development protein 1, humanhuman

TSL 1 (best)

Gene CFDP1, Length 1,167 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-207ENST00000566901 CLSPNQ9HAW4 1339 aa18.56■□□□□ 0.56
CFDP1-207ENST00000566901 RNF216Q9NWF9 866 aaPredicted RBP18.56■□□□□ 0.56
CFDP1-207ENST00000566901 DHX57Q6P158 1386 aaKnown RBP18.55■□□□□ 0.56
CFDP1-207ENST00000566901 KIF15Q9NS87 1388 aa18.55■□□□□ 0.56
CFDP1-207ENST00000566901 MLECQ14165 292 aa18.55■□□□□ 0.56
CFDP1-207ENST00000566901 FBXO41Q8TF61 875 aa18.55■□□□□ 0.56
CFDP1-207ENST00000566901 RRP7BPQ9NSQ0 103 aa18.55■□□□□ 0.56
CFDP1-207ENST00000566901 LMTK3Q96Q04 1460 aa18.54■□□□□ 0.56
CFDP1-207ENST00000566901 ATP7AQ04656 1500 aa18.54■□□□□ 0.56
CFDP1-207ENST00000566901 ANKRD50Q9ULJ7 1429 aa18.53■□□□□ 0.56
CFDP1-207ENST00000566901 YEATS2Q9ULM3 1422 aa18.53■□□□□ 0.56
CFDP1-207ENST00000566901 DUOX2Q9NRD8 1548 aa18.53■□□□□ 0.56
CFDP1-207ENST00000566901 CCER1Q8TC90 406 aaPredicted RBP18.52■□□□□ 0.56
CFDP1-207ENST00000566901 MLH3Q9UHC1 1453 aa18.52■□□□□ 0.55
CFDP1-207ENST00000566901 SIGLEC1Q9BZZ2 1709 aa18.52■□□□□ 0.55
CFDP1-207ENST00000566901 SPAG9O60271 1321 aaKnown RBP18.51■□□□□ 0.55
CFDP1-207ENST00000566901 ERBINQ96RT1 1412 aa18.5■□□□□ 0.55
CFDP1-207ENST00000566901 ZEB1P37275 1124 aaPredicted RBP18.5■□□□□ 0.55
CFDP1-207ENST00000566901 HSPA2P54652 639 aa18.49■□□□□ 0.55
CFDP1-207ENST00000566901 MAGI2Q86UL8 1455 aa18.49■□□□□ 0.55
CFDP1-207ENST00000566901 NCBP3Q53F19 620 aaKnown RBP18.48■□□□□ 0.55
CFDP1-207ENST00000566901 KDM5DQ9BY66 1539 aa18.48■□□□□ 0.55
CFDP1-207ENST00000566901 KIDINS220Q9ULH0 1771 aa18.47■□□□□ 0.55
CFDP1-207ENST00000566901 MYT1LQ9UL68 1186 aa18.47■□□□□ 0.55
CFDP1-207ENST00000566901 AFAP1Q8N556 730 aa18.46■□□□□ 0.55
CFDP1-207ENST00000566901 UNC13BO14795 1591 aa18.45■□□□□ 0.54
CFDP1-207ENST00000566901 EIF2AK4Q9P2K8 1649 aaKnown RBP18.45■□□□□ 0.54
CFDP1-207ENST00000566901 ATP10AO60312 1499 aa18.42■□□□□ 0.54
CFDP1-207ENST00000566901 PREX1Q8TCU6 1659 aa18.41■□□□□ 0.54
CFDP1-207ENST00000566901 DEPDC5O75140 1603 aa18.39■□□□□ 0.53
CFDP1-207ENST00000566901 DHX29Q7Z478 1369 aaKnown RBP18.39■□□□□ 0.53
CFDP1-207ENST00000566901 PZPP20742 1482 aa18.39■□□□□ 0.53
CFDP1-207ENST00000566901 ABCA6Q8N139 1617 aa18.38■□□□□ 0.53
CFDP1-207ENST00000566901 NPM3O75607 178 aaKnown RBP18.38■□□□□ 0.53
CFDP1-207ENST00000566901 DIP2CQ9Y2E4 1556 aa18.38■□□□□ 0.53
CFDP1-207ENST00000566901 A2MP01023 1474 aa18.37■□□□□ 0.53
CFDP1-207ENST00000566901 IQGAP3Q86VI3 1631 aa18.36■□□□□ 0.53
CFDP1-207ENST00000566901 REREQ9P2R6 1566 aa18.36■□□□□ 0.53
CFDP1-207ENST00000566901 RNF17Q9BXT8 1623 aaKnown RBP18.34■□□□□ 0.53
CFDP1-207ENST00000566901 TRIM52Q96A61 297 aa18.34■□□□□ 0.53
CFDP1-207ENST00000566901 PRDM15P57071 1507 aaPredicted RBP18.33■□□□□ 0.53
CFDP1-207ENST00000566901 KCNA4P22459 653 aa18.32■□□□□ 0.52
CFDP1-207ENST00000566901 CEBPAP49715 358 aaPredicted RBP18.32■□□□□ 0.52
CFDP1-207ENST00000566901 MPHOSPH9Q99550 1183 aa18.32■□□□□ 0.52
CFDP1-207ENST00000566901 VWDEQ8N2E2 1590 aa18.32■□□□□ 0.52
CFDP1-207ENST00000566901 FAM135AQ9P2D6 1515 aa18.32■□□□□ 0.52
CFDP1-207ENST00000566901 NUP155O75694 1391 aa18.31■□□□□ 0.52
CFDP1-207ENST00000566901 ESF1Q9H501 851 aaKnown RBP18.31■□□□□ 0.52
CFDP1-207ENST00000566901 SETD1BQ9UPS6 1966 aaKnown RBP18.31■□□□□ 0.52
CFDP1-207ENST00000566901 UHRF1BP1Q6BDS2 1440 aa18.3■□□□□ 0.52
CFDP1-207ENST00000566901 MROH1Q8NDA8 1641 aa18.3■□□□□ 0.52
CFDP1-207ENST00000566901 CERKQ8TCT0 537 aa18.29■□□□□ 0.52
CFDP1-207ENST00000566901 DCAF8L1A6NGE4 600 aa18.28■□□□□ 0.52
CFDP1-207ENST00000566901 SLC4A1APQ9BWU0 796 aaKnown RBP18.28■□□□□ 0.52
CFDP1-207ENST00000566901 AGLP35573 1532 aa18.27■□□□□ 0.51
CFDP1-207ENST00000566901 C3P01024 1663 aa18.26■□□□□ 0.51
CFDP1-207ENST00000566901 LMTK2Q8IWU2 1503 aa18.26■□□□□ 0.51
CFDP1-207ENST00000566901 KANK1Q14678 1352 aa18.25■□□□□ 0.51
CFDP1-207ENST00000566901 ANKRD30BQ9BXX2 1392 aa18.25■□□□□ 0.51
CFDP1-207ENST00000566901 TIMELESSQ9UNS1 1208 aa18.24■□□□□ 0.51
CFDP1-207ENST00000566901 TET3O43151 1660 aa18.24■□□□□ 0.51
CFDP1-207ENST00000566901 STRCQ7RTU9 1775 aa18.24■□□□□ 0.51
CFDP1-207ENST00000566901 KIF3BO15066 747 aa18.21■□□□□ 0.51
CFDP1-207ENST00000566901 ZC3H13Q5T200 1668 aaKnown RBP18.2■□□□□ 0.5
CFDP1-207ENST00000566901 PKD2Q13563 968 aa18.2■□□□□ 0.5
CFDP1-207ENST00000566901 RPRD2Q5VT52 1461 aaKnown RBP18.19■□□□□ 0.5
CFDP1-207ENST00000566901 EFCAB6Q5THR3 1501 aa18.18■□□□□ 0.5
CFDP1-207ENST00000566901 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.16■□□□□ 0.52e-6■■■□□ 18
CFDP1-207ENST00000566901 ABCC3O15438 1527 aa18.16■□□□□ 0.5
CFDP1-207ENST00000566901 CNTLNQ9NXG0 1405 aa18.15■□□□□ 0.5
CFDP1-207ENST00000566901 E9PCH4 1651 aa18.15■□□□□ 0.5
CFDP1-207ENST00000566901 CEP152O94986 1710 aa18.13■□□□□ 0.49
CFDP1-207ENST00000566901 TRPM2O94759 1503 aa18.13■□□□□ 0.49
CFDP1-207ENST00000566901 MROH2AA6NES4 1674 aa18.12■□□□□ 0.49
CFDP1-207ENST00000566901 SIN3AQ96ST3 1273 aa18.12■□□□□ 0.49
CFDP1-207ENST00000566901 PTPRTO14522 1441 aa18.12■□□□□ 0.49
CFDP1-207ENST00000566901 TONSLQ96HA7 1378 aa18.11■□□□□ 0.49
CFDP1-207ENST00000566901 ARHGAP31Q2M1Z3 1444 aa18.11■□□□□ 0.49
CFDP1-207ENST00000566901 PLA2R1Q13018 1463 aa18.11■□□□□ 0.49
CFDP1-207ENST00000566901 CLTCQ00610 1675 aaKnown RBP18.11■□□□□ 0.49
CFDP1-207ENST00000566901 SPHKAPQ2M3C7 1700 aa18.1■□□□□ 0.49
CFDP1-207ENST00000566901 CAMSAP1Q5T5Y3 1602 aa18.1■□□□□ 0.49
CFDP1-207ENST00000566901 DISP3Q9P2K9 1392 aa18.08■□□□□ 0.49
CFDP1-207ENST00000566901 CCDC144AA2RUR9 1427 aa18.07■□□□□ 0.48
CFDP1-207ENST00000566901 NEUROD1Q13562 356 aa18.07■□□□□ 0.48
CFDP1-207ENST00000566901 NEURL4Q96JN8 1562 aa18.06■□□□□ 0.48
CFDP1-207ENST00000566901 GGT6Q6P531 493 aa18.06■□□□□ 0.48
CFDP1-207ENST00000566901 MYO3AQ8NEV4 1616 aa18.05■□□□□ 0.48
CFDP1-207ENST00000566901 NPATQ14207 1427 aa18.05■□□□□ 0.48
CFDP1-207ENST00000566901 WASHC2CQ9Y4E1 1318 aa18.04■□□□□ 0.48
CFDP1-207ENST00000566901 ZMYM3Q14202 1370 aa18.03■□□□□ 0.48
CFDP1-207ENST00000566901 ZNF142P52746 1687 aaPredicted RBP18.03■□□□□ 0.48
CFDP1-207ENST00000566901 SPATA31D1Q6ZQQ2 1576 aa18.02■□□□□ 0.48
CFDP1-207ENST00000566901 NOS1P29475 1434 aa18.01■□□□□ 0.47
CFDP1-207ENST00000566901 CLTCL1P53675 1640 aa18■□□□□ 0.47
CFDP1-207ENST00000566901 LTBP4Q8N2S1 1624 aa18■□□□□ 0.47
CFDP1-207ENST00000566901 PPP1R15AO75807 674 aaPredicted RBP17.99■□□□□ 0.47
CFDP1-207ENST00000566901 CEP170BQ9Y4F5 1589 aaPredicted RBP17.99■□□□□ 0.47
CFDP1-207ENST00000566901 NCKAP5LQ9HCH0 1330 aa17.98■□□□□ 0.47
CFDP1-207ENST00000566901 PIK3C2BO00750 1634 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms