RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 DEPDC5O75140 1603 aa30.73■■■□□ 2.51
RNF40-210ENST00000566811 ZC3H13Q5T200 1668 aaKnown RBP30.71■■■□□ 2.51
RNF40-210ENST00000566811 RRP7BPQ9NSQ0 103 aa30.71■■■□□ 2.51
RNF40-210ENST00000566811 MROH2AA6NES4 1674 aa30.71■■■□□ 2.51
RNF40-210ENST00000566811 ITGAEP38570 1179 aa30.7■■■□□ 2.51
RNF40-210ENST00000566811 ANKRD50Q9ULJ7 1429 aa30.7■■■□□ 2.5
RNF40-210ENST00000566811 PRDM15P57071 1507 aaPredicted RBP30.69■■■□□ 2.5
RNF40-210ENST00000566811 PPP6R1Q9UPN7 881 aa30.69■■■□□ 2.5
RNF40-210ENST00000566811 CNTLNQ9NXG0 1405 aa30.69■■■□□ 2.5
RNF40-210ENST00000566811 HFM1A2PYH4 1435 aa30.66■■■□□ 2.5
RNF40-210ENST00000566811 PLPPR3Q6T4P5 718 aa30.66■■■□□ 2.5
RNF40-210ENST00000566811 KDM5DQ9BY66 1539 aa30.65■■■□□ 2.5
RNF40-210ENST00000566811 HSPA2P54652 639 aa30.65■■■□□ 2.5
RNF40-210ENST00000566811 MROH1Q8NDA8 1641 aa30.65■■■□□ 2.5
RNF40-210ENST00000566811 KIF3BO15066 747 aa30.64■■■□□ 2.5
RNF40-210ENST00000566811 UNC13BO14795 1591 aa30.62■■■□□ 2.49
RNF40-210ENST00000566811 CLTCQ00610 1675 aaKnown RBP30.61■■■□□ 2.49
RNF40-210ENST00000566811 NAIPQ13075 1403 aa30.6■■■□□ 2.49
RNF40-210ENST00000566811 MLECQ14165 292 aa30.6■■■□□ 2.49
RNF40-210ENST00000566811 ESF1Q9H501 851 aaKnown RBP30.59■■■□□ 2.49
RNF40-210ENST00000566811 GGT6Q6P531 493 aa30.56■■■□□ 2.48
RNF40-210ENST00000566811 VWDEQ8N2E2 1590 aa30.55■■■□□ 2.48
RNF40-210ENST00000566811 KANK1Q14678 1352 aa30.54■■■□□ 2.48
RNF40-210ENST00000566811 ABCC3O15438 1527 aa30.53■■■□□ 2.48
RNF40-210ENST00000566811 C3P01024 1663 aa30.53■■■□□ 2.48
RNF40-210ENST00000566811 CEP152O94986 1710 aa30.53■■■□□ 2.48
RNF40-210ENST00000566811 ACIN1Q9UKV3 1341 aaKnown RBP30.51■■■□□ 2.48
RNF40-210ENST00000566811 LMTK2Q8IWU2 1503 aa30.51■■■□□ 2.47
RNF40-210ENST00000566811 CAMSAP1Q5T5Y3 1602 aa30.5■■■□□ 2.47
RNF40-210ENST00000566811 IQGAP3Q86VI3 1631 aa30.5■■■□□ 2.47
RNF40-210ENST00000566811 WASHC2CQ9Y4E1 1318 aa30.47■■■□□ 2.47
RNF40-210ENST00000566811 TET3O43151 1660 aa30.45■■■□□ 2.46
RNF40-210ENST00000566811 EFCAB6Q5THR3 1501 aa30.42■■■□□ 2.46
RNF40-210ENST00000566811 PZPP20742 1482 aa30.41■■■□□ 2.46
RNF40-210ENST00000566811 ZMYM3Q14202 1370 aa30.41■■■□□ 2.46
RNF40-210ENST00000566811 NPATQ14207 1427 aa30.4■■■□□ 2.46
RNF40-210ENST00000566811 SETD5Q9C0A6 1442 aa30.4■■■□□ 2.46
RNF40-210ENST00000566811 CERKQ8TCT0 537 aa30.4■■■□□ 2.46
RNF40-210ENST00000566811 ARHGAP31Q2M1Z3 1444 aa30.39■■■□□ 2.46
RNF40-210ENST00000566811 CEBPAP49715 358 aaPredicted RBP30.39■■■□□ 2.46
RNF40-210ENST00000566811 SETD1BQ9UPS6 1966 aaKnown RBP30.39■■■□□ 2.46
RNF40-210ENST00000566811 TRIM26Q12899 539 aaPredicted RBP30.38■■■□□ 2.45
RNF40-210ENST00000566811 RPRD2Q5VT52 1461 aaKnown RBP30.37■■■□□ 2.45
RNF40-210ENST00000566811 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.35■■■□□ 2.453e-7■■□□□ 11.5
RNF40-210ENST00000566811 PREX1Q8TCU6 1659 aa30.35■■■□□ 2.45
RNF40-210ENST00000566811 NUP155O75694 1391 aa30.33■■■□□ 2.45
RNF40-210ENST00000566811 SPATA31D1Q6ZQQ2 1576 aa30.31■■■□□ 2.44
RNF40-210ENST00000566811 RAB3GAP2Q9H2M9 1393 aa30.28■■■□□ 2.44
RNF40-210ENST00000566811 E9PCH4 1651 aa30.27■■■□□ 2.44
RNF40-210ENST00000566811 HRCP23327 699 aa30.27■■■□□ 2.44
RNF40-210ENST00000566811 MYO3AQ8NEV4 1616 aa30.25■■■□□ 2.43
RNF40-210ENST00000566811 ERVK-7P63135 1459 aa30.25■■■□□ 2.43
RNF40-210ENST00000566811 ZNF142P52746 1687 aaPredicted RBP30.25■■■□□ 2.43
RNF40-210ENST00000566811 STRCQ7RTU9 1775 aa30.21■■■□□ 2.43
RNF40-210ENST00000566811 CFAP65Q6ZU64 1925 aaKnown RBP30.21■■■□□ 2.43
RNF40-210ENST00000566811 UHRF1BP1Q6BDS2 1440 aa30.2■■■□□ 2.42
RNF40-210ENST00000566811 SPHKAPQ2M3C7 1700 aa30.19■■■□□ 2.42
RNF40-210ENST00000566811 NLRP1Q9C000 1473 aa30.19■■■□□ 2.42
RNF40-210ENST00000566811 TRIM52Q96A61 297 aa30.18■■■□□ 2.42
RNF40-210ENST00000566811 TNRQ92752 1358 aa30.17■■■□□ 2.42
RNF40-210ENST00000566811 DMRT2Q9Y5R5 561 aa30.16■■■□□ 2.42
RNF40-210ENST00000566811 NOS1P29475 1434 aa30.15■■■□□ 2.42
RNF40-210ENST00000566811 KDM5AP29375 1690 aaKnown RBP30.14■■■□□ 2.42
RNF40-210ENST00000566811 CEP170BQ9Y4F5 1589 aaPredicted RBP30.14■■■□□ 2.42
RNF40-210ENST00000566811 SYNMO15061 1565 aa30.12■■■□□ 2.41
RNF40-210ENST00000566811 SLC4A1APQ9BWU0 796 aaKnown RBP30.1■■■□□ 2.41
RNF40-210ENST00000566811 A2ML1A8K2U0 1454 aa30.1■■■□□ 2.41
RNF40-210ENST00000566811 PIK3C2BO00750 1634 aa30.1■■■□□ 2.41
RNF40-210ENST00000566811 TRPM2O94759 1503 aa30.08■■■□□ 2.41
RNF40-210ENST00000566811 FBXO31Q5XUX0 539 aaPredicted RBP30.08■■■□□ 2.41
RNF40-210ENST00000566811 PTPRTO14522 1441 aa30.06■■■□□ 2.4
RNF40-210ENST00000566811 MPHOSPH9Q99550 1183 aa30.03■■■□□ 2.4
RNF40-210ENST00000566811 UBR1Q8IWV7 1749 aa30.02■■■□□ 2.4
RNF40-210ENST00000566811 SLC52A1Q9NWF4 448 aa30.02■■■□□ 2.4
RNF40-210ENST00000566811 UGGT1Q9NYU2 1555 aa30.02■■■□□ 2.4
RNF40-210ENST00000566811 PKD2Q13563 968 aa30.01■■■□□ 2.39
RNF40-210ENST00000566811 ADGRB3O60242 1522 aa29.99■■■□□ 2.39
RNF40-210ENST00000566811 PLA2R1Q13018 1463 aa29.95■■■□□ 2.39
RNF40-210ENST00000566811 KIF1BO60333 1816 aa29.95■■■□□ 2.39
RNF40-210ENST00000566811 CLTCL1P53675 1640 aa29.93■■■□□ 2.38
RNF40-210ENST00000566811 DISP3Q9P2K9 1392 aa29.93■■■□□ 2.38
RNF40-210ENST00000566811 ILDR2Q71H61 639 aa29.93■■■□□ 2.38
RNF40-210ENST00000566811 LTBP4Q8N2S1 1624 aa29.92■■■□□ 2.38
RNF40-210ENST00000566811 TMEM131LA2VDJ0 1609 aa29.91■■■□□ 2.38
RNF40-210ENST00000566811 POLR1AO95602 1720 aaPredicted RBP29.91■■■□□ 2.38
RNF40-210ENST00000566811 THEMISQ8N1K5 641 aaPredicted RBP29.89■■■□□ 2.38
RNF40-210ENST00000566811 MYO5BQ9ULV0 1848 aa29.88■■■□□ 2.37
RNF40-210ENST00000566811 NEURL4Q96JN8 1562 aa29.87■■■□□ 2.37
RNF40-210ENST00000566811 IDI1Q13907 227 aa29.87■■■□□ 2.37
RNF40-210ENST00000566811 CCDC144AA2RUR9 1427 aa29.87■■■□□ 2.37
RNF40-210ENST00000566811 SLIT1O75093 1534 aa29.86■■■□□ 2.37
RNF40-210ENST00000566811 PCGF6Q9BYE7 350 aa29.86■■■□□ 2.37
RNF40-210ENST00000566811 ARHGAP23Q9P227 1491 aa29.83■■■□□ 2.37
RNF40-210ENST00000566811 STAG3Q9UJ98 1225 aa29.83■■■□□ 2.37
RNF40-210ENST00000566811 NCKAP5LQ9HCH0 1330 aa29.8■■■□□ 2.36
RNF40-210ENST00000566811 IQSEC2Q5JU85 1478 aa29.79■■■□□ 2.36
RNF40-210ENST00000566811 ANKRD30BQ9BXX2 1392 aa29.78■■■□□ 2.36
RNF40-210ENST00000566811 FOXD1Q16676 465 aa29.78■■■□□ 2.36
RNF40-210ENST00000566811 TMEM2Q9UHN6 1383 aa29.77■■■□□ 2.36
RNF40-210ENST00000566811 SOCS7O14512 581 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 198 ms