RNA–Protein interactions for RNA: ENST00000566259.1

CPNE2-207, Transcript of copine 2, humanhuman

TSL 3

Gene CPNE2, Length 404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2-207ENST00000566259 PLEKHH2Q8IVE3 1493 aa25.52■■□□□ 1.68
CPNE2-207ENST00000566259 SCAF1Q9H7N4 1312 aaKnown RBP25.51■■□□□ 1.67
CPNE2-207ENST00000566259 DNMT1P26358 1616 aaKnown RBP25.51■■□□□ 1.67
CPNE2-207ENST00000566259 CPS1P31327 1500 aa25.49■■□□□ 1.67
CPNE2-207ENST00000566259 PIP4K2BP78356 416 aa25.48■■□□□ 1.67
CPNE2-207ENST00000566259 ADGBQ8N7X0 1667 aa25.48■■□□□ 1.67
CPNE2-207ENST00000566259 POLR1AO95602 1720 aaPredicted RBP25.47■■□□□ 1.67
CPNE2-207ENST00000566259 TOM1O60784 492 aa25.47■■□□□ 1.67
CPNE2-207ENST00000566259 CFDP1Q9UEE9 299 aaPredicted RBP25.46■■□□□ 1.67
CPNE2-207ENST00000566259 NEURL4Q96JN8 1562 aa25.45■■□□□ 1.66
CPNE2-207ENST00000566259 SHANK2Q9UPX8 1470 aa25.43■■□□□ 1.66
CPNE2-207ENST00000566259 CCNB3Q8WWL7 1395 aa25.42■■□□□ 1.66
CPNE2-207ENST00000566259 MYOM3Q5VTT5 1437 aa25.38■■□□□ 1.65
CPNE2-207ENST00000566259 TNRQ92752 1358 aa25.37■■□□□ 1.65
CPNE2-207ENST00000566259 VWDEQ8N2E2 1590 aa25.35■■□□□ 1.65
CPNE2-207ENST00000566259 RRBP1Q9P2E9 1410 aaKnown RBP25.35■■□□□ 1.65
CPNE2-207ENST00000566259 FBXO31Q5XUX0 539 aaPredicted RBP25.34■■□□□ 1.65
CPNE2-207ENST00000566259 PHF23Q9BUL5 403 aaPredicted RBP25.34■■□□□ 1.65
CPNE2-207ENST00000566259 PZPP20742 1482 aa25.34■■□□□ 1.65
CPNE2-207ENST00000566259 ALKQ9UM73 1620 aa25.34■■□□□ 1.65
CPNE2-207ENST00000566259 RTEL1-TNFRSF6BF6WH68 1400 aa25.33■■□□□ 1.65
CPNE2-207ENST00000566259 MBD5Q9P267 1494 aa25.33■■□□□ 1.65
CPNE2-207ENST00000566259 DHX29Q7Z478 1369 aaKnown RBP25.32■■□□□ 1.64
CPNE2-207ENST00000566259 FGD6Q6ZV73 1430 aa25.32■■□□□ 1.64
CPNE2-207ENST00000566259 ZNF644Q9H582 1327 aaPredicted RBP25.32■■□□□ 1.64
CPNE2-207ENST00000566259 MIA2Q96PC5 1412 aa25.31■■□□□ 1.64
CPNE2-207ENST00000566259 ANKLE2Q86XL3 938 aa25.31■■□□□ 1.64
CPNE2-207ENST00000566259 KDM5DQ9BY66 1539 aa25.31■■□□□ 1.64
CPNE2-207ENST00000566259 FAM135AQ9P2D6 1515 aa25.31■■□□□ 1.64
CPNE2-207ENST00000566259 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.31■■□□□ 1.64
CPNE2-207ENST00000566259 MED14O60244 1454 aa25.28■■□□□ 1.64
CPNE2-207ENST00000566259 DEPDC5O75140 1603 aa25.28■■□□□ 1.64
CPNE2-207ENST00000566259 THEMISQ8N1K5 641 aaPredicted RBP25.27■■□□□ 1.64
CPNE2-207ENST00000566259 NPHP4O75161 1426 aaPredicted RBP25.27■■□□□ 1.64
CPNE2-207ENST00000566259 KIF3BO15066 747 aa25.26■■□□□ 1.63
CPNE2-207ENST00000566259 NLRP1Q9C000 1473 aa25.26■■□□□ 1.63
CPNE2-207ENST00000566259 UGGT1Q9NYU2 1555 aa25.26■■□□□ 1.63
CPNE2-207ENST00000566259 WASHC2CQ9Y4E1 1318 aa25.23■■□□□ 1.63
CPNE2-207ENST00000566259 IQGAP1P46940 1657 aa25.23■■□□□ 1.63
CPNE2-207ENST00000566259 PTPN23Q9H3S7 1636 aa25.23■■□□□ 1.63
CPNE2-207ENST00000566259 TRIM26Q12899 539 aaPredicted RBP25.22■■□□□ 1.63
CPNE2-207ENST00000566259 RNF17Q9BXT8 1623 aaKnown RBP25.19■■□□□ 1.62
CPNE2-207ENST00000566259 STRCP1A6NGW2 1772 aa25.19■■□□□ 1.62
CPNE2-207ENST00000566259 CCDC141Q6ZP82 1450 aa25.19■■□□□ 1.62
CPNE2-207ENST00000566259 LRRC7Q96NW7 1537 aa25.18■■□□□ 1.62
CPNE2-207ENST00000566259 SYNMO15061 1565 aa25.18■■□□□ 1.62
CPNE2-207ENST00000566259 CAMSAP2Q08AD1 1489 aa25.17■■□□□ 1.62
CPNE2-207ENST00000566259 SENP3Q9H4L4 574 aaPredicted RBP25.16■■□□□ 1.62
CPNE2-207ENST00000566259 FAM50AQ14320 339 aaKnown RBP25.11■■□□□ 1.61
CPNE2-207ENST00000566259 RSPH4AQ5TD94 716 aa25.1■■□□□ 1.61
CPNE2-207ENST00000566259 RGS17Q9UGC6 210 aaPredicted RBP25.09■■□□□ 1.61
CPNE2-207ENST00000566259 ZC3H13Q5T200 1668 aaKnown RBP25.08■■□□□ 1.61
CPNE2-207ENST00000566259 ABCC3O15438 1527 aa25.06■■□□□ 1.6
CPNE2-207ENST00000566259 ARHGEF5Q12774 1597 aa25.05■■□□□ 1.6
CPNE2-207ENST00000566259 ERVK-7P63135 1459 aa25.03■■□□□ 1.6
CPNE2-207ENST00000566259 ABCC5O15440 1437 aa25.02■■□□□ 1.6
CPNE2-207ENST00000566259 DAPK1P53355 1430 aa25.02■■□□□ 1.6
CPNE2-207ENST00000566259 UBR1Q8IWV7 1749 aa25.01■■□□□ 1.59
CPNE2-207ENST00000566259 SCAF11Q99590 1463 aaKnown RBP25.01■■□□□ 1.59
CPNE2-207ENST00000566259 TSPY4P0CV99 314 aa24.99■■□□□ 1.59
CPNE2-207ENST00000566259 TSPY10P0CW01 314 aa24.99■■□□□ 1.59
CPNE2-207ENST00000566259 XIRP1Q702N8 1843 aaKnown RBP24.98■■□□□ 1.59
CPNE2-207ENST00000566259 PCGF6Q9BYE7 350 aa24.97■■□□□ 1.59
CPNE2-207ENST00000566259 EIF2AK4Q9P2K8 1649 aaKnown RBP24.97■■□□□ 1.59
CPNE2-207ENST00000566259 CROCC2H7BZ55 1655 aa24.96■■□□□ 1.59
CPNE2-207ENST00000566259 MROH1Q8NDA8 1641 aa24.95■■□□□ 1.58
CPNE2-207ENST00000566259 ARHGAP23Q9P227 1491 aa24.95■■□□□ 1.58
CPNE2-207ENST00000566259 SLIT1O75093 1534 aa24.94■■□□□ 1.58
CPNE2-207ENST00000566259 MAST1Q9Y2H9 1570 aa24.93■■□□□ 1.58
CPNE2-207ENST00000566259 CEP152O94986 1710 aa24.93■■□□□ 1.58
CPNE2-207ENST00000566259 LTKP29376 864 aa24.93■■□□□ 1.58
CPNE2-207ENST00000566259 ITGAEP38570 1179 aa24.93■■□□□ 1.58
CPNE2-207ENST00000566259 FAM135BQ49AJ0 1406 aa24.93■■□□□ 1.58
CPNE2-207ENST00000566259 CFAP65Q6ZU64 1925 aaKnown RBP24.91■■□□□ 1.58
CPNE2-207ENST00000566259 POTEAQ6S8J7 498 aa24.91■■□□□ 1.58
CPNE2-207ENST00000566259 TXNDC2Q86VQ3 553 aa24.91■■□□□ 1.58
CPNE2-207ENST00000566259 ADGRL2O95490 1459 aa24.89■■□□□ 1.57
CPNE2-207ENST00000566259 ROCK1Q13464 1354 aa24.88■■□□□ 1.57
CPNE2-207ENST00000566259 EID1Q9Y6B2 187 aa24.85■■□□□ 1.57
CPNE2-207ENST00000566259 ROBO1Q9Y6N7 1651 aa24.83■■□□□ 1.57
CPNE2-207ENST00000566259 ARHGAP31Q2M1Z3 1444 aa24.83■■□□□ 1.57
CPNE2-207ENST00000566259 TMEM94Q12767 1356 aa24.82■■□□□ 1.56
CPNE2-207ENST00000566259 HFM1A2PYH4 1435 aa24.82■■□□□ 1.56
CPNE2-207ENST00000566259 CHIC2Q9UKJ5 165 aa24.81■■□□□ 1.56
CPNE2-207ENST00000566259 DUOX2Q9NRD8 1548 aa24.81■■□□□ 1.56
CPNE2-207ENST00000566259 TMEM2Q9UHN6 1383 aa24.8■■□□□ 1.56
CPNE2-207ENST00000566259 PIK3C2BO00750 1634 aa24.8■■□□□ 1.56
CPNE2-207ENST00000566259 PRDM15P57071 1507 aaPredicted RBP24.8■■□□□ 1.56
CPNE2-207ENST00000566259 ANKRD30AQ9BXX3 1397 aa24.8■■□□□ 1.56
CPNE2-207ENST00000566259 NAIPQ13075 1403 aa24.78■■□□□ 1.56
CPNE2-207ENST00000566259 SETD1AO15047 1707 aaKnown RBP24.77■■□□□ 1.56
CPNE2-207ENST00000566259 KCNA6P17658 529 aa24.76■■□□□ 1.55
CPNE2-207ENST00000566259 GCC2Q8IWJ2 1684 aa24.75■■□□□ 1.55
CPNE2-207ENST00000566259 KDM5AP29375 1690 aaKnown RBP24.75■■□□□ 1.55
CPNE2-207ENST00000566259 EFCAB6Q5THR3 1501 aa24.73■■□□□ 1.55
CPNE2-207ENST00000566259 KIF15Q9NS87 1388 aa24.73■■□□□ 1.55
CPNE2-207ENST00000566259 RRP7BPQ9NSQ0 103 aa24.73■■□□□ 1.55
CPNE2-207ENST00000566259 STAG3Q9UJ98 1225 aa24.73■■□□□ 1.55
CPNE2-207ENST00000566259 SETD5Q9C0A6 1442 aa24.72■■□□□ 1.55
CPNE2-207ENST00000566259 TET3O43151 1660 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms